RNA–Protein interactions for RNA: ENST00000548230.1

CNOT2-210, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-210ENST00000548230 AEBP2Q6ZN18 517 aaPredicted RBP20.42■□□□□ 0.86
CNOT2-210ENST00000548230 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
CNOT2-210ENST00000548230 PHF23Q9BUL5 403 aaPredicted RBP17.42■□□□□ 0.38
CNOT2-210ENST00000548230 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
CNOT2-210ENST00000548230 FOXD1Q16676 465 aa16.11■□□□□ 0.17
CNOT2-210ENST00000548230 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
CNOT2-210ENST00000548230 ADRA2BP18089 450 aa15.48■□□□□ 0.07
CNOT2-210ENST00000548230 PPP6R1Q9UPN7 881 aa15.48■□□□□ 0.07
CNOT2-210ENST00000548230 PIAS4Q8N2W9 510 aaPredicted RBP15.19■□□□□ 0.02
CNOT2-210ENST00000548230 MSH5O43196 834 aa14.79□□□□□ -0.04
CNOT2-210ENST00000548230 MAPK8IP2Q13387 824 aaPredicted RBP14.13□□□□□ -0.15
CNOT2-210ENST00000548230 PPP4R3CPQ6ZMV5 832 aa14.13□□□□□ -0.15
CNOT2-210ENST00000548230 SCAF1Q9H7N4 1312 aaKnown RBP14□□□□□ -0.17
CNOT2-210ENST00000548230 POTEDQ86YR6 584 aa13.8□□□□□ -0.2
CNOT2-210ENST00000548230 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
CNOT2-210ENST00000548230 KCNA4P22459 653 aa13.71□□□□□ -0.21
CNOT2-210ENST00000548230 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
CNOT2-210ENST00000548230 NCBP3Q53F19 620 aaKnown RBP13.65□□□□□ -0.22
CNOT2-210ENST00000548230 NPM3O75607 178 aaKnown RBP13.51□□□□□ -0.25
CNOT2-210ENST00000548230 DNAJC5BQ9UF47 199 aa13.5□□□□□ -0.25
CNOT2-210ENST00000548230 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
CNOT2-210ENST00000548230 DCAF8L1A6NGE4 600 aa13.41□□□□□ -0.26
CNOT2-210ENST00000548230 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
CNOT2-210ENST00000548230 DNAJC5Q9H3Z4 198 aa13.37□□□□□ -0.27
CNOT2-210ENST00000548230 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
CNOT2-210ENST00000548230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.34
CNOT2-210ENST00000548230 ABCC9O60706 1549 aa12.91□□□□□ -0.34
CNOT2-210ENST00000548230 SLC4A2P04920 1241 aa12.79□□□□□ -0.36
CNOT2-210ENST00000548230 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
CNOT2-210ENST00000548230 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
CNOT2-210ENST00000548230 U3KPZ7 1027 aaPredicted RBP12.62□□□□□ -0.39
CNOT2-210ENST00000548230 ZBTB22O15209 634 aa12.59□□□□□ -0.39
CNOT2-210ENST00000548230 CACNB1Q02641 598 aaPredicted RBP12.58□□□□□ -0.4
CNOT2-210ENST00000548230 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
CNOT2-210ENST00000548230 C1QBPQ07021 282 aaKnown RBP12.5□□□□□ -0.41
CNOT2-210ENST00000548230 MYCNP04198 464 aaPredicted RBP12.42□□□□□ -0.42
CNOT2-210ENST00000548230 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
CNOT2-210ENST00000548230 SPINK5Q9NQ38 1064 aaPredicted RBP12.39□□□□□ -0.43
CNOT2-210ENST00000548230 CAPN15O75808 1086 aa12.36□□□□□ -0.43
CNOT2-210ENST00000548230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
CNOT2-210ENST00000548230 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
CNOT2-210ENST00000548230 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
CNOT2-210ENST00000548230 SAMD1Q6SPF0 538 aaPredicted RBP12.3□□□□□ -0.44
CNOT2-210ENST00000548230 ATF5Q9Y2D1 282 aaPredicted RBP12.25□□□□□ -0.45
CNOT2-210ENST00000548230 NISCHQ9Y2I1 1504 aa12.22□□□□□ -0.45
CNOT2-210ENST00000548230 APLP2Q06481 763 aa12.19□□□□□ -0.46
CNOT2-210ENST00000548230 ABCB7O75027 752 aa12.17□□□□□ -0.46
CNOT2-210ENST00000548230 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
CNOT2-210ENST00000548230 ZNF219Q9P2Y4 722 aaPredicted RBP12.1□□□□□ -0.47
CNOT2-210ENST00000548230 DSG3P32926 999 aa12.08□□□□□ -0.48
CNOT2-210ENST00000548230 POLA2Q14181 598 aa12.02□□□□□ -0.49
CNOT2-210ENST00000548230 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
CNOT2-210ENST00000548230 PABPN1Q86U42 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
CNOT2-210ENST00000548230 CECR2Q9BXF3 1484 aa11.77□□□□□ -0.52
CNOT2-210ENST00000548230 ILDR1Q86SU0 546 aaPredicted RBP11.72□□□□□ -0.53
CNOT2-210ENST00000548230 CUX2O14529 1486 aa11.67□□□□□ -0.54
CNOT2-210ENST00000548230 FBLN2P98095 1184 aa11.64□□□□□ -0.55
CNOT2-210ENST00000548230 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
CNOT2-210ENST00000548230 ZBTB12Q9Y330 459 aaPredicted RBP11.62□□□□□ -0.55
CNOT2-210ENST00000548230 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
CNOT2-210ENST00000548230 RB1CC1Q8TDY2 1594 aa11.57□□□□□ -0.56
CNOT2-210ENST00000548230 CC2D2AQ9P2K1 1620 aa11.53□□□□□ -0.56
CNOT2-210ENST00000548230 RBM42Q9BTD8 480 aaKnown RBP11.43□□□□□ -0.58
CNOT2-210ENST00000548230 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
CNOT2-210ENST00000548230 CCDC180Q9P1Z9 1646 aa11.38□□□□□ -0.59
CNOT2-210ENST00000548230 BICRAQ9NZM4 1560 aa11.37□□□□□ -0.59
CNOT2-210ENST00000548230 SPDYE2BA6NHP3 402 aa11.35□□□□□ -0.59
CNOT2-210ENST00000548230 SPDYE6P0CI01 402 aa11.35□□□□□ -0.59
CNOT2-210ENST00000548230 SPDYE2Q495Y8 402 aa11.35□□□□□ -0.59
CNOT2-210ENST00000548230 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
CNOT2-210ENST00000548230 FKBP8Q14318 412 aa11.3□□□□□ -0.6
CNOT2-210ENST00000548230 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
CNOT2-210ENST00000548230 REM2Q8IYK8 340 aaPredicted RBP11.26□□□□□ -0.61
CNOT2-210ENST00000548230 SSUH2Q9Y2M2 353 aa11.23□□□□□ -0.61
CNOT2-210ENST00000548230 UNC13AQ9UPW8 1703 aa11.23□□□□□ -0.61
CNOT2-210ENST00000548230 CLEC11AQ9Y240 323 aa11.22□□□□□ -0.61
CNOT2-210ENST00000548230 ERCC6Q03468 1493 aa11.2□□□□□ -0.62
CNOT2-210ENST00000548230 NACADO15069 1562 aa11.17□□□□□ -0.62
CNOT2-210ENST00000548230 EIF4G1Q04637 1599 aaKnown RBP11.17□□□□□ -0.62
CNOT2-210ENST00000548230 PITPNM1O00562 1244 aa11.14□□□□□ -0.63
CNOT2-210ENST00000548230 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
CNOT2-210ENST00000548230 SPDYE1Q8NFV5 336 aaPredicted RBP11.08□□□□□ -0.64
CNOT2-210ENST00000548230 PRR29P0C7W0 189 aa11.01□□□□□ -0.65
CNOT2-210ENST00000548230 SHROOM4Q9ULL8 1493 aa11□□□□□ -0.65
CNOT2-210ENST00000548230 SOCS7O14512 581 aa10.98□□□□□ -0.65
CNOT2-210ENST00000548230 CHADLQ6NUI6 762 aa10.96□□□□□ -0.65
CNOT2-210ENST00000548230 PROM2Q8N271 834 aa10.95□□□□□ -0.66
CNOT2-210ENST00000548230 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
CNOT2-210ENST00000548230 STAG3Q9UJ98 1225 aa10.93□□□□□ -0.66
CNOT2-210ENST00000548230 LMTK3Q96Q04 1460 aa10.93□□□□□ -0.66
CNOT2-210ENST00000548230 DCAF8L2P0C7V8 631 aa10.9□□□□□ -0.66
CNOT2-210ENST00000548230 PRKAR2AP13861 404 aaKnown RBP10.9□□□□□ -0.66
CNOT2-210ENST00000548230 POTEHQ6S545 545 aa10.9□□□□□ -0.66
CNOT2-210ENST00000548230 RIMBP3CA6NJZ7 1639 aa10.89□□□□□ -0.67
CNOT2-210ENST00000548230 RIMBP3BA6NNM3 1639 aa10.89□□□□□ -0.67
CNOT2-210ENST00000548230 RIMBP3Q9UFD9 1639 aa10.89□□□□□ -0.67
CNOT2-210ENST00000548230 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.67
CNOT2-210ENST00000548230 ILDR2Q71H61 639 aa10.85□□□□□ -0.67
CNOT2-210ENST00000548230 MIER1Q8N108 512 aa10.84□□□□□ -0.67
CNOT2-210ENST00000548230 CYB5RLQ6IPT4 315 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms