RNA–Protein interactions for RNA: ENST00000546590.2

TMTC2-202, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 4,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-202ENST00000546590 NISCHQ9Y2I1 1504 aa15.91■□□□□ 0.14
TMTC2-202ENST00000546590 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
TMTC2-202ENST00000546590 SHROOM4Q9ULL8 1493 aa15□□□□□ -0.01
TMTC2-202ENST00000546590 SUPT5HO00267 1087 aaKnown RBP14.89□□□□□ -0.03
TMTC2-202ENST00000546590 EHMT2Q96KQ7 1210 aa14.34□□□□□ -0.11
TMTC2-202ENST00000546590 FAM9AQ8IZU1 332 aaPredicted RBP13.99□□□□□ -0.17
TMTC2-202ENST00000546590 PCGF6Q9BYE7 350 aa13.98□□□□□ -0.17
TMTC2-202ENST00000546590 LOC105371045A0A1W2PR82 267 aa13.81□□□□□ -0.2
TMTC2-202ENST00000546590 TTBK1Q5TCY1 1321 aaPredicted RBP13.79□□□□□ -0.2
TMTC2-202ENST00000546590 CHIC1Q5VXU3 224 aa13.75□□□□□ -0.21
TMTC2-202ENST00000546590 PPARGC1BQ86YN6 1023 aaKnown RBP13.7□□□□□ -0.22
TMTC2-202ENST00000546590 TRIM41Q8WV44 630 aa13.56□□□□□ -0.24
TMTC2-202ENST00000546590 RANGAP1P46060 587 aaPredicted RBP13.48□□□□□ -0.25
TMTC2-202ENST00000546590 HRCP23327 699 aa13.42□□□□□ -0.26
TMTC2-202ENST00000546590 MYO15BQ96JP2 1530 aa13.36□□□□□ -0.27
TMTC2-202ENST00000546590 ABCC9O60706 1549 aa13.3□□□□□ -0.28
TMTC2-202ENST00000546590 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
TMTC2-202ENST00000546590 TRIM26Q12899 539 aaPredicted RBP13.21□□□□□ -0.29
TMTC2-202ENST00000546590 UBTFP17480 764 aaKnown RBP13.18□□□□□ -0.3
TMTC2-202ENST00000546590 CCER1Q8TC90 406 aaPredicted RBP13.18□□□□□ -0.3
TMTC2-202ENST00000546590 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
TMTC2-202ENST00000546590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.13□□□□□ -0.31
TMTC2-202ENST00000546590 SCRIBQ14160 1630 aa13.06□□□□□ -0.32
TMTC2-202ENST00000546590 YTHDC1Q96MU7 727 aaKnown RBP13.01□□□□□ -0.33
TMTC2-202ENST00000546590 APLP2Q06481 763 aa12.98□□□□□ -0.33
TMTC2-202ENST00000546590 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
TMTC2-202ENST00000546590 ATP1B4Q9UN42 357 aaPredicted RBP12.91□□□□□ -0.34
TMTC2-202ENST00000546590 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
TMTC2-202ENST00000546590 ZEB1P37275 1124 aaPredicted RBP12.88□□□□□ -0.35
TMTC2-202ENST00000546590 ITGAEP38570 1179 aa12.88□□□□□ -0.35
TMTC2-202ENST00000546590 RSF1Q96T23 1441 aaPredicted RBP12.84□□□□□ -0.35
TMTC2-202ENST00000546590 CECR2Q9BXF3 1484 aa12.78□□□□□ -0.36
TMTC2-202ENST00000546590 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.37
TMTC2-202ENST00000546590 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
TMTC2-202ENST00000546590 RB1CC1Q8TDY2 1594 aa12.65□□□□□ -0.38
TMTC2-202ENST00000546590 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
TMTC2-202ENST00000546590 CENPBP07199 599 aaPredicted RBP12.63□□□□□ -0.39
TMTC2-202ENST00000546590 P3H3Q8IVL6 736 aa12.56□□□□□ -0.4
TMTC2-202ENST00000546590 MROH2BQ7Z745 1585 aa12.56□□□□□ -0.4
TMTC2-202ENST00000546590 GTF3C3Q9Y5Q9 886 aa12.55□□□□□ -0.4
TMTC2-202ENST00000546590 CNGB1Q14028 1251 aaPredicted RBP12.52□□□□□ -0.41
TMTC2-202ENST00000546590 SCAF1Q9H7N4 1312 aaKnown RBP12.52□□□□□ -0.41
TMTC2-202ENST00000546590 NEUROD1Q13562 356 aa12.49□□□□□ -0.41
TMTC2-202ENST00000546590 SOGA1O94964 1423 aa12.48□□□□□ -0.41
TMTC2-202ENST00000546590 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
TMTC2-202ENST00000546590 ARID3CA6NKF2 412 aa12.46□□□□□ -0.42
TMTC2-202ENST00000546590 FAM50AQ14320 339 aaKnown RBP12.45□□□□□ -0.42
TMTC2-202ENST00000546590 WIZO95785 1651 aa12.44□□□□□ -0.42
TMTC2-202ENST00000546590 CCDC88BA6NC98 1476 aa12.41□□□□□ -0.42
TMTC2-202ENST00000546590 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
TMTC2-202ENST00000546590 CEP162Q5TB80 1403 aa12.4□□□□□ -0.42
TMTC2-202ENST00000546590 ACIN1Q9UKV3 1341 aaKnown RBP12.39□□□□□ -0.43
TMTC2-202ENST00000546590 HIRIP3Q9BW71 556 aaPredicted RBP12.35□□□□□ -0.43
TMTC2-202ENST00000546590 RUSC2Q8N2Y8 1516 aa12.35□□□□□ -0.43
TMTC2-202ENST00000546590 BCANQ96GW7 911 aa12.35□□□□□ -0.43
TMTC2-202ENST00000546590 MIER1Q8N108 512 aa12.35□□□□□ -0.43
TMTC2-202ENST00000546590 NACADO15069 1562 aa12.31□□□□□ -0.44
TMTC2-202ENST00000546590 POLR3GLQ9BT43 218 aa12.3□□□□□ -0.44
TMTC2-202ENST00000546590 CLIP1P30622 1438 aa12.27□□□□□ -0.45
TMTC2-202ENST00000546590 WRNQ14191 1432 aaPredicted RBP eCLIP12.27□□□□□ -0.45
TMTC2-202ENST00000546590 BAZ1AQ9NRL2 1556 aaPredicted RBP12.23□□□□□ -0.45
TMTC2-202ENST00000546590 KANK4Q5T7N3 995 aaPredicted RBP12.2□□□□□ -0.46
TMTC2-202ENST00000546590 TNIKQ9UKE5 1360 aa12.19□□□□□ -0.46
TMTC2-202ENST00000546590 DDX10Q13206 875 aaKnown RBP12.17□□□□□ -0.46
TMTC2-202ENST00000546590 TRIM52Q96A61 297 aa12.17□□□□□ -0.46
TMTC2-202ENST00000546590 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
TMTC2-202ENST00000546590 GOLGA3Q08378 1498 aa12.16□□□□□ -0.46
TMTC2-202ENST00000546590 CHIC2Q9UKJ5 165 aa12.15□□□□□ -0.46
TMTC2-202ENST00000546590 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
TMTC2-202ENST00000546590 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
TMTC2-202ENST00000546590 FBLN2P98095 1184 aa12.14□□□□□ -0.47
TMTC2-202ENST00000546590 SIN3AQ96ST3 1273 aa12.12□□□□□ -0.47
TMTC2-202ENST00000546590 ZNF326Q5BKZ1 582 aaKnown RBP12.12□□□□□ -0.47
TMTC2-202ENST00000546590 NEFLP07196 543 aa12.09□□□□□ -0.47
TMTC2-202ENST00000546590 RAPGEF2Q9Y4G8 1499 aa12.06□□□□□ -0.48
TMTC2-202ENST00000546590 TOP2AP11388 1531 aaKnown RBP12.04□□□□□ -0.48
TMTC2-202ENST00000546590 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
TMTC2-202ENST00000546590 SMARCA4P51532 1647 aa12.02□□□□□ -0.48
TMTC2-202ENST00000546590 ZNF777Q9ULD5 760 aaPredicted RBP12.02□□□□□ -0.49
TMTC2-202ENST00000546590 KCNH8Q96L42 1107 aa12.02□□□□□ -0.49
TMTC2-202ENST00000546590 IRX6P78412 446 aaPredicted RBP12.01□□□□□ -0.49
TMTC2-202ENST00000546590 RRP7BPQ9NSQ0 103 aa12.01□□□□□ -0.49
TMTC2-202ENST00000546590 EEA1Q15075 1411 aa12□□□□□ -0.49
TMTC2-202ENST00000546590 SMARCA2P51531 1590 aa11.99□□□□□ -0.49
TMTC2-202ENST00000546590 FKBP8Q14318 412 aa11.98□□□□□ -0.49
TMTC2-202ENST00000546590 ANP32CO43423 234 aa11.96□□□□□ -0.5
TMTC2-202ENST00000546590 VPS8Q8N3P4 1428 aa11.96□□□□□ -0.5
TMTC2-202ENST00000546590 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
TMTC2-202ENST00000546590 CUX2O14529 1486 aa11.93□□□□□ -0.5
TMTC2-202ENST00000546590 KIF27Q86VH2 1401 aa11.93□□□□□ -0.5
TMTC2-202ENST00000546590 MYT1LQ9UL68 1186 aa11.92□□□□□ -0.5
TMTC2-202ENST00000546590 FOXD1Q16676 465 aa11.9□□□□□ -0.5
TMTC2-202ENST00000546590 ERICH6Q7L0X2 663 aa11.9□□□□□ -0.5
TMTC2-202ENST00000546590 FAM9BQ8IZU0 186 aa11.89□□□□□ -0.51
TMTC2-202ENST00000546590 TONSLQ96HA7 1378 aa11.89□□□□□ -0.51
TMTC2-202ENST00000546590 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMTC2-202ENST00000546590 MTUS2Q5JR59 1369 aa11.88□□□□□ -0.51
TMTC2-202ENST00000546590 CCNB3Q8WWL7 1395 aa11.88□□□□□ -0.51
TMTC2-202ENST00000546590 SALL2Q9Y467 1007 aaPredicted RBP11.87□□□□□ -0.51
TMTC2-202ENST00000546590 CARMIL1Q5VZK9 1371 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms