RNA–Protein interactions for RNA: ENST00000539326.1

PPFIBP1-209, Transcript of PPFIA binding protein 1, humanhuman

TSL 3

Gene PPFIBP1, Length 973 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-209ENST00000539326 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
PPFIBP1-209ENST00000539326 AEBP2Q6ZN18 517 aaPredicted RBP20.6■□□□□ 0.89
PPFIBP1-209ENST00000539326 PHF23Q9BUL5 403 aaPredicted RBP18.54■□□□□ 0.56
PPFIBP1-209ENST00000539326 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
PPFIBP1-209ENST00000539326 SENP3Q9H4L4 574 aaPredicted RBP17.4■□□□□ 0.38
PPFIBP1-209ENST00000539326 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
PPFIBP1-209ENST00000539326 ADRA2BP18089 450 aa16.32■□□□□ 0.2
PPFIBP1-209ENST00000539326 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
PPFIBP1-209ENST00000539326 KCNA4P22459 653 aa16.16■□□□□ 0.18
PPFIBP1-209ENST00000539326 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
PPFIBP1-209ENST00000539326 FOXD1Q16676 465 aa16.01■□□□□ 0.15
PPFIBP1-209ENST00000539326 SLC4A1APQ9BWU0 796 aaKnown RBP15.59■□□□□ 0.09
PPFIBP1-209ENST00000539326 PPP4R3CPQ6ZMV5 832 aa15.52■□□□□ 0.08
PPFIBP1-209ENST00000539326 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
PPFIBP1-209ENST00000539326 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
PPFIBP1-209ENST00000539326 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
PPFIBP1-209ENST00000539326 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
PPFIBP1-209ENST00000539326 CCDC180Q9P1Z9 1646 aa15.13■□□□□ 0.01
PPFIBP1-209ENST00000539326 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
PPFIBP1-209ENST00000539326 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
PPFIBP1-209ENST00000539326 ZBTB22O15209 634 aa14.84□□□□□ -0.03
PPFIBP1-209ENST00000539326 SCAF1Q9H7N4 1312 aaKnown RBP14.84□□□□□ -0.03
PPFIBP1-209ENST00000539326 ABCC9O60706 1549 aa14.79□□□□□ -0.04
PPFIBP1-209ENST00000539326 FOXD4L1Q9NU39 408 aa14.63□□□□□ -0.07
PPFIBP1-209ENST00000539326 ZCCHC6Q5VYS8 1495 aaKnown RBP14.49□□□□□ -0.09
PPFIBP1-209ENST00000539326 MSH5O43196 834 aa14.46□□□□□ -0.09
PPFIBP1-209ENST00000539326 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
PPFIBP1-209ENST00000539326 MAPK8IP2Q13387 824 aaPredicted RBP14.4□□□□□ -0.1
PPFIBP1-209ENST00000539326 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
PPFIBP1-209ENST00000539326 DNAJC5Q9H3Z4 198 aa14.35□□□□□ -0.11
PPFIBP1-209ENST00000539326 AMER1Q5JTC6 1135 aaPredicted RBP14.34□□□□□ -0.11
PPFIBP1-209ENST00000539326 RTN4Q9NQC3 1192 aaKnown RBP14.3□□□□□ -0.12
PPFIBP1-209ENST00000539326 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
PPFIBP1-209ENST00000539326 DCAF8L2P0C7V8 631 aa14.21□□□□□ -0.13
PPFIBP1-209ENST00000539326 NACADO15069 1562 aa14.18□□□□□ -0.14
PPFIBP1-209ENST00000539326 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
PPFIBP1-209ENST00000539326 RB1CC1Q8TDY2 1594 aa14.14□□□□□ -0.15
PPFIBP1-209ENST00000539326 SLC4A2P04920 1241 aa14.04□□□□□ -0.16
PPFIBP1-209ENST00000539326 HOXD11P31277 338 aaPredicted RBP14.04□□□□□ -0.16
PPFIBP1-209ENST00000539326 FKBP8Q14318 412 aa14.03□□□□□ -0.16
PPFIBP1-209ENST00000539326 ATXN8OSP0DMR3 200 aa14.02□□□□□ -0.17
PPFIBP1-209ENST00000539326 DMRT2Q9Y5R5 561 aa14□□□□□ -0.17
PPFIBP1-209ENST00000539326 MYCNP04198 464 aaPredicted RBP13.99□□□□□ -0.17
PPFIBP1-209ENST00000539326 SHROOM4Q9ULL8 1493 aa13.95□□□□□ -0.18
PPFIBP1-209ENST00000539326 UNC13AQ9UPW8 1703 aa13.87□□□□□ -0.19
PPFIBP1-209ENST00000539326 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
PPFIBP1-209ENST00000539326 BICRAQ9NZM4 1560 aa13.73□□□□□ -0.21
PPFIBP1-209ENST00000539326 PABPN1Q86U42 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
PPFIBP1-209ENST00000539326 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
PPFIBP1-209ENST00000539326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.5□□□□□ -0.25
PPFIBP1-209ENST00000539326 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
PPFIBP1-209ENST00000539326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.25
PPFIBP1-209ENST00000539326 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
PPFIBP1-209ENST00000539326 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
PPFIBP1-209ENST00000539326 SUPT5HO00267 1087 aaKnown RBP13.46□□□□□ -0.25
PPFIBP1-209ENST00000539326 CECR2Q9BXF3 1484 aa13.41□□□□□ -0.26
PPFIBP1-209ENST00000539326 CC2D2AQ9P2K1 1620 aa13.36□□□□□ -0.27
PPFIBP1-209ENST00000539326 EIF4G1Q04637 1599 aaKnown RBP13.33□□□□□ -0.28
PPFIBP1-209ENST00000539326 RSF1Q96T23 1441 aaPredicted RBP13.33□□□□□ -0.28
PPFIBP1-209ENST00000539326 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
PPFIBP1-209ENST00000539326 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
PPFIBP1-209ENST00000539326 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
PPFIBP1-209ENST00000539326 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
PPFIBP1-209ENST00000539326 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
PPFIBP1-209ENST00000539326 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
PPFIBP1-209ENST00000539326 SMARCA4P51532 1647 aa13.23□□□□□ -0.29
PPFIBP1-209ENST00000539326 PLCB2Q00722 1185 aa13.19□□□□□ -0.3
PPFIBP1-209ENST00000539326 WIZO95785 1651 aa13.18□□□□□ -0.3
PPFIBP1-209ENST00000539326 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
PPFIBP1-209ENST00000539326 APLP2Q06481 763 aa13.17□□□□□ -0.3
PPFIBP1-209ENST00000539326 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
PPFIBP1-209ENST00000539326 PEG3Q9GZU2 1588 aa13.11□□□□□ -0.31
PPFIBP1-209ENST00000539326 CUX2O14529 1486 aa13.11□□□□□ -0.31
PPFIBP1-209ENST00000539326 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
PPFIBP1-209ENST00000539326 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
PPFIBP1-209ENST00000539326 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
PPFIBP1-209ENST00000539326 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
PPFIBP1-209ENST00000539326 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
PPFIBP1-209ENST00000539326 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
PPFIBP1-209ENST00000539326 BAZ1BQ9UIG0 1483 aaKnown RBP13□□□□□ -0.33
PPFIBP1-209ENST00000539326 FBLN2P98095 1184 aa12.98□□□□□ -0.33
PPFIBP1-209ENST00000539326 PROM2Q8N271 834 aa12.97□□□□□ -0.33
PPFIBP1-209ENST00000539326 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
PPFIBP1-209ENST00000539326 IFNLR1Q8IU57 520 aaPredicted RBP12.92□□□□□ -0.34
PPFIBP1-209ENST00000539326 BCANQ96GW7 911 aa12.92□□□□□ -0.34
PPFIBP1-209ENST00000539326 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
PPFIBP1-209ENST00000539326 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
PPFIBP1-209ENST00000539326 PKD2Q13563 968 aa12.82□□□□□ -0.36
PPFIBP1-209ENST00000539326 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
PPFIBP1-209ENST00000539326 POLA2Q14181 598 aa12.76□□□□□ -0.37
PPFIBP1-209ENST00000539326 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.76□□□□□ -0.37
PPFIBP1-209ENST00000539326 ERCC6Q03468 1493 aa12.75□□□□□ -0.37
PPFIBP1-209ENST00000539326 PRKCSHP14314 528 aaPredicted RBP12.74□□□□□ -0.37
PPFIBP1-209ENST00000539326 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
PPFIBP1-209ENST00000539326 TAOK2Q9UL54 1235 aa12.73□□□□□ -0.37
PPFIBP1-209ENST00000539326 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.37
PPFIBP1-209ENST00000539326 LAMC3Q9Y6N6 1575 aa12.71□□□□□ -0.37
PPFIBP1-209ENST00000539326 NESP48681 1621 aa12.7□□□□□ -0.38
PPFIBP1-209ENST00000539326 BBXQ8WY36 941 aaPredicted RBP12.69□□□□□ -0.38
PPFIBP1-209ENST00000539326 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms