RNA–Protein interactions for RNA: ENST00000538503.5

KDM2B-209, Transcript of lysine demethylase 2B, humanhuman

TSL 5

Gene KDM2B, Length 6,676 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-209ENST00000538503 DCAF8L2P0C7V8 631 aa24.63■■□□□ 1.53
KDM2B-209ENST00000538503 FAM9AQ8IZU1 332 aaPredicted RBP22.43■■□□□ 1.18
KDM2B-209ENST00000538503 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.06
KDM2B-209ENST00000538503 EHMT2Q96KQ7 1210 aa21.67■■□□□ 1.06
KDM2B-209ENST00000538503 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
KDM2B-209ENST00000538503 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.02
KDM2B-209ENST00000538503 APLP2Q06481 763 aa21.43■■□□□ 1.02
KDM2B-209ENST00000538503 MYT1LQ9UL68 1186 aa21.37■■□□□ 1.01
KDM2B-209ENST00000538503 ATP1B4Q9UN42 357 aaPredicted RBP21.32■■□□□ 1
KDM2B-209ENST00000538503 RANGAP1P46060 587 aaPredicted RBP21.15■□□□□ 0.98
KDM2B-209ENST00000538503 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
KDM2B-209ENST00000538503 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.94
KDM2B-209ENST00000538503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.84■□□□□ 0.93
KDM2B-209ENST00000538503 HNRNPUL2Q1KMD3 747 aaKnown RBP20.84■□□□□ 0.93
KDM2B-209ENST00000538503 PELP1Q8IZL8 1130 aaKnown RBP20.44■□□□□ 0.86
KDM2B-209ENST00000538503 FBLN2P98095 1184 aa20.35■□□□□ 0.85
KDM2B-209ENST00000538503 UBTFP17480 764 aaKnown RBP20.31■□□□□ 0.84
KDM2B-209ENST00000538503 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
KDM2B-209ENST00000538503 SLC4A1APQ9BWU0 796 aaKnown RBP20.22■□□□□ 0.83
KDM2B-209ENST00000538503 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
KDM2B-209ENST00000538503 ABCC9O60706 1549 aa20.2■□□□□ 0.82
KDM2B-209ENST00000538503 BCANQ96GW7 911 aa20.19■□□□□ 0.82
KDM2B-209ENST00000538503 ESF1Q9H501 851 aaKnown RBP20.07■□□□□ 0.8
KDM2B-209ENST00000538503 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
KDM2B-209ENST00000538503 POLR3GLQ9BT43 218 aa19.91■□□□□ 0.78
KDM2B-209ENST00000538503 NPM1P06748 294 aaKnown RBP eCLIP19.88■□□□□ 0.77
KDM2B-209ENST00000538503 ERICH6Q7L0X2 663 aa19.83■□□□□ 0.77
KDM2B-209ENST00000538503 SLC24A1O60721 1099 aa19.73■□□□□ 0.75
KDM2B-209ENST00000538503 ITGAEP38570 1179 aa19.72■□□□□ 0.75
KDM2B-209ENST00000538503 TRHP20396 242 aaPredicted RBP19.66■□□□□ 0.74
KDM2B-209ENST00000538503 PCGF6Q9BYE7 350 aa19.64■□□□□ 0.73
KDM2B-209ENST00000538503 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
KDM2B-209ENST00000538503 STAG3Q9UJ98 1225 aa19.6■□□□□ 0.73
KDM2B-209ENST00000538503 CCER1Q8TC90 406 aaPredicted RBP19.55■□□□□ 0.72
KDM2B-209ENST00000538503 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
KDM2B-209ENST00000538503 CNGB1Q14028 1251 aaPredicted RBP19.52■□□□□ 0.72
KDM2B-209ENST00000538503 A0A0G2JS52 829 aa19.49■□□□□ 0.71
KDM2B-209ENST00000538503 CENPBP07199 599 aaPredicted RBP19.47■□□□□ 0.71
KDM2B-209ENST00000538503 ARID3CA6NKF2 412 aa19.4■□□□□ 0.7
KDM2B-209ENST00000538503 ARID4BQ4LE39 1312 aaPredicted RBP19.35■□□□□ 0.69
KDM2B-209ENST00000538503 TRIM52Q96A61 297 aa19.33■□□□□ 0.69
KDM2B-209ENST00000538503 YTHDC1Q96MU7 727 aaKnown RBP19.3■□□□□ 0.68
KDM2B-209ENST00000538503 C14orf37Q86TY3 774 aa19.26■□□□□ 0.67
KDM2B-209ENST00000538503 CHGAP10645 457 aaKnown RBP19.25■□□□□ 0.67
KDM2B-209ENST00000538503 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
KDM2B-209ENST00000538503 HAP1P54257 671 aaPredicted RBP19.23■□□□□ 0.67
KDM2B-209ENST00000538503 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
KDM2B-209ENST00000538503 NEFLP07196 543 aa19.22■□□□□ 0.67
KDM2B-209ENST00000538503 ZNF777Q9ULD5 760 aaPredicted RBP19.22■□□□□ 0.67
KDM2B-209ENST00000538503 PPARGC1BQ86YN6 1023 aaKnown RBP19.22■□□□□ 0.67
KDM2B-209ENST00000538503 ZEB1P37275 1124 aaPredicted RBP19.2■□□□□ 0.66
KDM2B-209ENST00000538503 PLEKHG5O94827 1062 aa19.15■□□□□ 0.66
KDM2B-209ENST00000538503 NEFMP07197 916 aa19.13■□□□□ 0.65
KDM2B-209ENST00000538503 MYT1Q01538 1121 aa19.1■□□□□ 0.65
KDM2B-209ENST00000538503 ZNF326Q5BKZ1 582 aaKnown RBP19.1■□□□□ 0.65
KDM2B-209ENST00000538503 ERCC6Q03468 1493 aa19.08■□□□□ 0.64
KDM2B-209ENST00000538503 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
KDM2B-209ENST00000538503 ZBTB7CA1YPR0 619 aa19.07■□□□□ 0.64
KDM2B-209ENST00000538503 ZBTB47Q9UFB7 747 aaPredicted RBP19.03■□□□□ 0.64
KDM2B-209ENST00000538503 CDK11AQ9UQ88 783 aaPredicted RBP19.02■□□□□ 0.63
KDM2B-209ENST00000538503 P3H3Q8IVL6 736 aa19.01■□□□□ 0.63
KDM2B-209ENST00000538503 DAXXQ9UER7 740 aaPredicted RBP18.98■□□□□ 0.63
KDM2B-209ENST00000538503 NPM2Q86SE8 214 aaKnown RBP18.96■□□□□ 0.63
KDM2B-209ENST00000538503 BCL11AQ9H165 835 aa18.95■□□□□ 0.62
KDM2B-209ENST00000538503 PPP1R15AO75807 674 aaPredicted RBP18.92■□□□□ 0.62
KDM2B-209ENST00000538503 CLSPNQ9HAW4 1339 aa18.83■□□□□ 0.61
KDM2B-209ENST00000538503 KCNH8Q96L42 1107 aa18.81■□□□□ 0.6
KDM2B-209ENST00000538503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.76■□□□□ 0.591e-6■■■■□ 21.3
KDM2B-209ENST00000538503 NPHP1O15259 732 aa18.76■□□□□ 0.59
KDM2B-209ENST00000538503 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
KDM2B-209ENST00000538503 DCAF8L1A6NGE4 600 aa18.68■□□□□ 0.58
KDM2B-209ENST00000538503 LMOD2Q6P5Q4 547 aa18.68■□□□□ 0.58
KDM2B-209ENST00000538503 NEUROD1Q13562 356 aa18.67■□□□□ 0.58
KDM2B-209ENST00000538503 ARXQ96QS3 562 aa18.66■□□□□ 0.58
KDM2B-209ENST00000538503 CANXP27824 592 aaKnown RBP18.64■□□□□ 0.57
KDM2B-209ENST00000538503 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
KDM2B-209ENST00000538503 MLECQ14165 292 aa18.6■□□□□ 0.57
KDM2B-209ENST00000538503 TRIM26Q12899 539 aaPredicted RBP18.53■□□□□ 0.56
KDM2B-209ENST00000538503 CCDC9Q9Y3X0 531 aaKnown RBP18.51■□□□□ 0.55
KDM2B-209ENST00000538503 ZNF316A6NFI3 1004 aaPredicted RBP18.46■□□□□ 0.54
KDM2B-209ENST00000538503 MEX3CQ5U5Q3 659 aaKnown RBP18.44■□□□□ 0.54
KDM2B-209ENST00000538503 TSPY4P0CV99 314 aa18.44■□□□□ 0.54
KDM2B-209ENST00000538503 TSPY10P0CW01 314 aa18.44■□□□□ 0.54
KDM2B-209ENST00000538503 HRCP23327 699 aa18.42■□□□□ 0.54
KDM2B-209ENST00000538503 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.53
KDM2B-209ENST00000538503 RTL5Q5HYW3 569 aaPredicted RBP18.33■□□□□ 0.52
KDM2B-209ENST00000538503 PLEKHD1A6NEE1 506 aa18.33■□□□□ 0.52
KDM2B-209ENST00000538503 FOXD1Q16676 465 aa18.29■□□□□ 0.52
KDM2B-209ENST00000538503 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
KDM2B-209ENST00000538503 HDGFP51858 240 aaKnown RBP18.26■□□□□ 0.51
KDM2B-209ENST00000538503 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
KDM2B-209ENST00000538503 CHIC2Q9UKJ5 165 aa18.2■□□□□ 0.5
KDM2B-209ENST00000538503 TULP1O00294 542 aaPredicted RBP18.19■□□□□ 0.5
KDM2B-209ENST00000538503 KLHL34Q8N239 644 aa18.14■□□□□ 0.5
KDM2B-209ENST00000538503 KDM2AQ9Y2K7 1162 aa18.13■□□□□ 0.49
KDM2B-209ENST00000538503 POGKQ9P215 609 aa18.12■□□□□ 0.49
KDM2B-209ENST00000538503 CYB5RLQ6IPT4 315 aa18.12■□□□□ 0.49
KDM2B-209ENST00000538503 CDK11BP21127 795 aaKnown RBP18.11■□□□□ 0.49
KDM2B-209ENST00000538503 DIEXFQ68CQ4 756 aaKnown RBP18.11■□□□□ 0.49
KDM2B-209ENST00000538503 TMC1Q8TDI8 760 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms