RNA–Protein interactions for RNA: ENST00000538243.1

KDM2B-207, Transcript of lysine demethylase 2B, humanhuman

TSL 2

Gene KDM2B, Length 4,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-207ENST00000538243 NISCHQ9Y2I1 1504 aa28.64■■■□□ 2.17
KDM2B-207ENST00000538243 DCAF8L2P0C7V8 631 aa27.79■■■□□ 2.04
KDM2B-207ENST00000538243 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
KDM2B-207ENST00000538243 SHROOM4Q9ULL8 1493 aa27.46■■□□□ 1.99
KDM2B-207ENST00000538243 PCGF6Q9BYE7 350 aa26.73■■□□□ 1.87
KDM2B-207ENST00000538243 EHMT2Q96KQ7 1210 aa26.54■■□□□ 1.84
KDM2B-207ENST00000538243 FAM9AQ8IZU1 332 aaPredicted RBP26.03■■□□□ 1.76
KDM2B-207ENST00000538243 HRCP23327 699 aa26.02■■□□□ 1.76
KDM2B-207ENST00000538243 PPARGC1BQ86YN6 1023 aaKnown RBP25.87■■□□□ 1.73
KDM2B-207ENST00000538243 TTBK1Q5TCY1 1321 aaPredicted RBP25.72■■□□□ 1.71
KDM2B-207ENST00000538243 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
KDM2B-207ENST00000538243 LOC105371045A0A1W2PR82 267 aa25.62■■□□□ 1.69
KDM2B-207ENST00000538243 ZEB1P37275 1124 aaPredicted RBP25.45■■□□□ 1.67
KDM2B-207ENST00000538243 TRIM41Q8WV44 630 aa25.44■■□□□ 1.66
KDM2B-207ENST00000538243 TRIM26Q12899 539 aaPredicted RBP25.39■■□□□ 1.65
KDM2B-207ENST00000538243 PELP1Q8IZL8 1130 aaKnown RBP25.38■■□□□ 1.65
KDM2B-207ENST00000538243 CCER1Q8TC90 406 aaPredicted RBP25.37■■□□□ 1.65
KDM2B-207ENST00000538243 CENPBP07199 599 aaPredicted RBP25.23■■□□□ 1.63
KDM2B-207ENST00000538243 YTHDC1Q96MU7 727 aaKnown RBP25.11■■□□□ 1.61
KDM2B-207ENST00000538243 APLP2Q06481 763 aa24.94■■□□□ 1.58
KDM2B-207ENST00000538243 RANGAP1P46060 587 aaPredicted RBP24.93■■□□□ 1.58
KDM2B-207ENST00000538243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.81■■□□□ 1.56
KDM2B-207ENST00000538243 UBTFP17480 764 aaKnown RBP24.75■■□□□ 1.55
KDM2B-207ENST00000538243 DIEXFQ68CQ4 756 aaKnown RBP24.56■■□□□ 1.52
KDM2B-207ENST00000538243 MYT1Q01538 1121 aa24.51■■□□□ 1.51
KDM2B-207ENST00000538243 MYO15BQ96JP2 1530 aa24.5■■□□□ 1.51
KDM2B-207ENST00000538243 GTF3C3Q9Y5Q9 886 aa24.5■■□□□ 1.51
KDM2B-207ENST00000538243 HNRNPUL2Q1KMD3 747 aaKnown RBP24.42■■□□□ 1.5
KDM2B-207ENST00000538243 SCAF1Q9H7N4 1312 aaKnown RBP24.28■■□□□ 1.48
KDM2B-207ENST00000538243 ACIN1Q9UKV3 1341 aaKnown RBP24.26■■□□□ 1.47
KDM2B-207ENST00000538243 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
KDM2B-207ENST00000538243 ATP1B4Q9UN42 357 aaPredicted RBP24.14■■□□□ 1.45
KDM2B-207ENST00000538243 ERICH6Q7L0X2 663 aa24.13■■□□□ 1.45
KDM2B-207ENST00000538243 ITGAEP38570 1179 aa24.12■■□□□ 1.45
KDM2B-207ENST00000538243 NEUROD1Q13562 356 aa24.1■■□□□ 1.45
KDM2B-207ENST00000538243 NEFLP07196 543 aa24.08■■□□□ 1.45
KDM2B-207ENST00000538243 ZCCHC6Q5VYS8 1495 aaKnown RBP23.95■■□□□ 1.42
KDM2B-207ENST00000538243 ZNF316A6NFI3 1004 aaPredicted RBP23.93■■□□□ 1.42
KDM2B-207ENST00000538243 BCANQ96GW7 911 aa23.83■■□□□ 1.41
KDM2B-207ENST00000538243 CNGB1Q14028 1251 aaPredicted RBP23.58■■□□□ 1.36
KDM2B-207ENST00000538243 MIER1Q8N108 512 aa23.54■■□□□ 1.36
KDM2B-207ENST00000538243 CSRNP3Q8WYN3 585 aa23.51■■□□□ 1.35
KDM2B-207ENST00000538243 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
KDM2B-207ENST00000538243 ABCC9O60706 1549 aa23.45■■□□□ 1.34
KDM2B-207ENST00000538243 POLR3GLQ9BT43 218 aa23.4■■□□□ 1.34
KDM2B-207ENST00000538243 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
KDM2B-207ENST00000538243 PABPN1Q86U42 306 aaKnown RBP eCLIP23.37■■□□□ 1.33
KDM2B-207ENST00000538243 SCRIBQ14160 1630 aa23.34■■□□□ 1.33
KDM2B-207ENST00000538243 RSF1Q96T23 1441 aaPredicted RBP23.26■■□□□ 1.31
KDM2B-207ENST00000538243 FKBP8Q14318 412 aa23.24■■□□□ 1.31
KDM2B-207ENST00000538243 ANP32CO43423 234 aa23.18■■□□□ 1.3
KDM2B-207ENST00000538243 DDX10Q13206 875 aaKnown RBP23.14■■□□□ 1.29
KDM2B-207ENST00000538243 TRIM52Q96A61 297 aa23.08■■□□□ 1.29
KDM2B-207ENST00000538243 CDK11AQ9UQ88 783 aaPredicted RBP23.06■■□□□ 1.28
KDM2B-207ENST00000538243 CEP162Q5TB80 1403 aa23.04■■□□□ 1.28
KDM2B-207ENST00000538243 P3H3Q8IVL6 736 aa23.02■■□□□ 1.28
KDM2B-207ENST00000538243 HIRIP3Q9BW71 556 aaPredicted RBP23.02■■□□□ 1.28
KDM2B-207ENST00000538243 RTL5Q5HYW3 569 aaPredicted RBP22.96■■□□□ 1.27
KDM2B-207ENST00000538243 CLSPNQ9HAW4 1339 aa22.94■■□□□ 1.26
KDM2B-207ENST00000538243 IRX6P78412 446 aaPredicted RBP22.88■■□□□ 1.25
KDM2B-207ENST00000538243 HNRNPUQ00839 825 aaKnown RBP eCLIP22.87■■□□□ 1.25
KDM2B-207ENST00000538243 DAXXQ9UER7 740 aaPredicted RBP22.87■■□□□ 1.25
KDM2B-207ENST00000538243 SUPT16HQ9Y5B9 1047 aaKnown RBP22.86■■□□□ 1.25
KDM2B-207ENST00000538243 CLIP1P30622 1438 aa22.84■■□□□ 1.25
KDM2B-207ENST00000538243 ZNF326Q5BKZ1 582 aaKnown RBP22.8■■□□□ 1.24
KDM2B-207ENST00000538243 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
KDM2B-207ENST00000538243 ANP32EQ9BTT0 268 aa22.79■■□□□ 1.24
KDM2B-207ENST00000538243 CECR2Q9BXF3 1484 aa22.76■■□□□ 1.23
KDM2B-207ENST00000538243 TNIKQ9UKE5 1360 aa22.73■■□□□ 1.23
KDM2B-207ENST00000538243 FAM9BQ8IZU0 186 aa22.7■■□□□ 1.22
KDM2B-207ENST00000538243 SOGA1O94964 1423 aa22.69■■□□□ 1.22
KDM2B-207ENST00000538243 ARID3CA6NKF2 412 aa22.69■■□□□ 1.22
KDM2B-207ENST00000538243 TONSLQ96HA7 1378 aa22.65■■□□□ 1.22
KDM2B-207ENST00000538243 GOLGA3Q08378 1498 aa22.65■■□□□ 1.22
KDM2B-207ENST00000538243 NBR1Q14596 966 aa22.64■■□□□ 1.21
KDM2B-207ENST00000538243 NPM2Q86SE8 214 aaKnown RBP22.63■■□□□ 1.21
KDM2B-207ENST00000538243 SIN3AQ96ST3 1273 aa22.57■■□□□ 1.2
KDM2B-207ENST00000538243 ANP32AP39687 249 aaKnown RBP22.55■■□□□ 1.2
KDM2B-207ENST00000538243 SENP3-EIF4A1A0A087X0R7 540 aa22.54■■□□□ 1.2
KDM2B-207ENST00000538243 EEA1Q15075 1411 aa22.52■■□□□ 1.2
KDM2B-207ENST00000538243 TSHZ2Q9NRE2 1034 aa22.51■■□□□ 1.19
KDM2B-207ENST00000538243 CCDC88BA6NC98 1476 aa22.5■■□□□ 1.19
KDM2B-207ENST00000538243 WRNQ14191 1432 aaPredicted RBP eCLIP22.5■■□□□ 1.19
KDM2B-207ENST00000538243 CHIC2Q9UKJ5 165 aa22.49■■□□□ 1.19
KDM2B-207ENST00000538243 ABCC8Q09428 1581 aa22.48■■□□□ 1.19
KDM2B-207ENST00000538243 SALL2Q9Y467 1007 aaPredicted RBP22.48■■□□□ 1.19
KDM2B-207ENST00000538243 BCL11AQ9H165 835 aa22.46■■□□□ 1.19
KDM2B-207ENST00000538243 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
KDM2B-207ENST00000538243 MRS2Q9HD23 443 aa22.45■■□□□ 1.18
KDM2B-207ENST00000538243 KCNH8Q96L42 1107 aa22.43■■□□□ 1.18
KDM2B-207ENST00000538243 RBM19Q9Y4C8 960 aaKnown RBP22.41■■□□□ 1.18
KDM2B-207ENST00000538243 CCDC136Q96JN2 1154 aa22.4■■□□□ 1.18
KDM2B-207ENST00000538243 CEP164Q9UPV0 1460 aa22.38■■□□□ 1.17
KDM2B-207ENST00000538243 KANK4Q5T7N3 995 aaPredicted RBP22.38■■□□□ 1.17
KDM2B-207ENST00000538243 MYT1LQ9UL68 1186 aa22.32■■□□□ 1.16
KDM2B-207ENST00000538243 SLC4A1APQ9BWU0 796 aaKnown RBP22.31■■□□□ 1.16
KDM2B-207ENST00000538243 ZBTB47Q9UFB7 747 aaPredicted RBP22.3■■□□□ 1.16
KDM2B-207ENST00000538243 EIF5BO60841 1220 aaKnown RBP22.27■■□□□ 1.16
KDM2B-207ENST00000538243 RRP7BPQ9NSQ0 103 aa22.27■■□□□ 1.16
KDM2B-207ENST00000538243 ZNF777Q9ULD5 760 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms