RNA–Protein interactions for RNA: ENST00000535681.1

NPTX1-202, Transcript of neuronal pentraxin 1, humanhuman

TSL 2

Gene NPTX1, Length 3,957 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1-202ENST00000535681 NISCHQ9Y2I1 1504 aa18.43■□□□□ 0.54
NPTX1-202ENST00000535681 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
NPTX1-202ENST00000535681 MYT1Q01538 1121 aa16.73■□□□□ 0.27
NPTX1-202ENST00000535681 DCAF8L2P0C7V8 631 aa16.53■□□□□ 0.24
NPTX1-202ENST00000535681 HRCP23327 699 aa16.53■□□□□ 0.24
NPTX1-202ENST00000535681 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
NPTX1-202ENST00000535681 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
NPTX1-202ENST00000535681 PPARGC1BQ86YN6 1023 aaKnown RBP16.17■□□□□ 0.18
NPTX1-202ENST00000535681 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
NPTX1-202ENST00000535681 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
NPTX1-202ENST00000535681 TTBK1Q5TCY1 1321 aaPredicted RBP15.79■□□□□ 0.12
NPTX1-202ENST00000535681 CHIC1Q5VXU3 224 aa15.6■□□□□ 0.09
NPTX1-202ENST00000535681 ZCCHC6Q5VYS8 1495 aaKnown RBP15.58■□□□□ 0.08
NPTX1-202ENST00000535681 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
NPTX1-202ENST00000535681 ZEB1P37275 1124 aaPredicted RBP15.5■□□□□ 0.07
NPTX1-202ENST00000535681 MYO15BQ96JP2 1530 aa15.49■□□□□ 0.07
NPTX1-202ENST00000535681 ACIN1Q9UKV3 1341 aaKnown RBP15.47■□□□□ 0.07
NPTX1-202ENST00000535681 CENPBP07199 599 aaPredicted RBP15.45■□□□□ 0.06
NPTX1-202ENST00000535681 GTF3C3Q9Y5Q9 886 aa15.45■□□□□ 0.06
NPTX1-202ENST00000535681 BCL11AQ9H165 835 aa15.38■□□□□ 0.05
NPTX1-202ENST00000535681 NEUROD1Q13562 356 aa15.34■□□□□ 0.05
NPTX1-202ENST00000535681 CCDC180Q9P1Z9 1646 aa15.34■□□□□ 0.05
NPTX1-202ENST00000535681 LOC105371045A0A1W2PR82 267 aa15.31■□□□□ 0.04
NPTX1-202ENST00000535681 TRIM26Q12899 539 aaPredicted RBP15.29■□□□□ 0.04
NPTX1-202ENST00000535681 PRKCSHP14314 528 aaPredicted RBP15.18■□□□□ 0.02
NPTX1-202ENST00000535681 FAM9AQ8IZU1 332 aaPredicted RBP15.13■□□□□ 0.01
NPTX1-202ENST00000535681 ERICH6Q7L0X2 663 aa15.12■□□□□ 0.01
NPTX1-202ENST00000535681 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
NPTX1-202ENST00000535681 ANP32EQ9BTT0 268 aa14.98□□□□□ -0.01
NPTX1-202ENST00000535681 DIEXFQ68CQ4 756 aaKnown RBP14.95□□□□□ -0.02
NPTX1-202ENST00000535681 YTHDC1Q96MU7 727 aaKnown RBP14.95□□□□□ -0.02
NPTX1-202ENST00000535681 TRIM41Q8WV44 630 aa14.94□□□□□ -0.02
NPTX1-202ENST00000535681 ABCC9O60706 1549 aa14.8□□□□□ -0.04
NPTX1-202ENST00000535681 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
NPTX1-202ENST00000535681 CCER1Q8TC90 406 aaPredicted RBP14.78□□□□□ -0.04
NPTX1-202ENST00000535681 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
NPTX1-202ENST00000535681 SCRIBQ14160 1630 aa14.76□□□□□ -0.05
NPTX1-202ENST00000535681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
NPTX1-202ENST00000535681 APLP2Q06481 763 aa14.62□□□□□ -0.07
NPTX1-202ENST00000535681 RB1CC1Q8TDY2 1594 aa14.6□□□□□ -0.07
NPTX1-202ENST00000535681 PABPN1Q86U42 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
NPTX1-202ENST00000535681 TSHZ2Q9NRE2 1034 aa14.53□□□□□ -0.08
NPTX1-202ENST00000535681 CECR2Q9BXF3 1484 aa14.51□□□□□ -0.09
NPTX1-202ENST00000535681 CLSPNQ9HAW4 1339 aa14.49□□□□□ -0.09
NPTX1-202ENST00000535681 ZNF316A6NFI3 1004 aaPredicted RBP14.48□□□□□ -0.09
NPTX1-202ENST00000535681 RANGAP1P46060 587 aaPredicted RBP14.45□□□□□ -0.1
NPTX1-202ENST00000535681 SUPT16HQ9Y5B9 1047 aaKnown RBP14.45□□□□□ -0.1
NPTX1-202ENST00000535681 MROH2BQ7Z745 1585 aa14.42□□□□□ -0.1
NPTX1-202ENST00000535681 MIER1Q8N108 512 aa14.41□□□□□ -0.1
NPTX1-202ENST00000535681 ANO8Q9HCE9 1232 aaPredicted RBP14.34□□□□□ -0.11
NPTX1-202ENST00000535681 WIZO95785 1651 aa14.32□□□□□ -0.12
NPTX1-202ENST00000535681 BCANQ96GW7 911 aa14.31□□□□□ -0.12
NPTX1-202ENST00000535681 UBTFP17480 764 aaKnown RBP14.28□□□□□ -0.12
NPTX1-202ENST00000535681 NACADO15069 1562 aa14.28□□□□□ -0.12
NPTX1-202ENST00000535681 MYT1LQ9UL68 1186 aa14.26□□□□□ -0.13
NPTX1-202ENST00000535681 RBM19Q9Y4C8 960 aaKnown RBP14.21□□□□□ -0.14
NPTX1-202ENST00000535681 NEFLP07196 543 aa14.19□□□□□ -0.14
NPTX1-202ENST00000535681 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
NPTX1-202ENST00000535681 CCDC88BA6NC98 1476 aa14.17□□□□□ -0.14
NPTX1-202ENST00000535681 DEKP35659 375 aaKnown RBP14.17□□□□□ -0.14
NPTX1-202ENST00000535681 CCDC136Q96JN2 1154 aa14.15□□□□□ -0.15
NPTX1-202ENST00000535681 SOGA1O94964 1423 aa14.14□□□□□ -0.15
NPTX1-202ENST00000535681 CEP162Q5TB80 1403 aa14.14□□□□□ -0.15
NPTX1-202ENST00000535681 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
NPTX1-202ENST00000535681 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
NPTX1-202ENST00000535681 FKBP8Q14318 412 aa14.11□□□□□ -0.15
NPTX1-202ENST00000535681 SALL2Q9Y467 1007 aaPredicted RBP14.11□□□□□ -0.15
NPTX1-202ENST00000535681 EIF5BO60841 1220 aaKnown RBP14.09□□□□□ -0.15
NPTX1-202ENST00000535681 UBE2Q2Q8WVN8 375 aa14.07□□□□□ -0.16
NPTX1-202ENST00000535681 ERICH6BQ5W0A0 696 aa14.06□□□□□ -0.16
NPTX1-202ENST00000535681 TNIKQ9UKE5 1360 aa14.05□□□□□ -0.16
NPTX1-202ENST00000535681 RUSC2Q8N2Y8 1516 aa14.05□□□□□ -0.16
NPTX1-202ENST00000535681 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
NPTX1-202ENST00000535681 WRNQ14191 1432 aaPredicted RBP eCLIP14.02□□□□□ -0.17
NPTX1-202ENST00000535681 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.01□□□□□ -0.17
NPTX1-202ENST00000535681 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
NPTX1-202ENST00000535681 ITGAEP38570 1179 aa13.99□□□□□ -0.17
NPTX1-202ENST00000535681 MSH5O43196 834 aa13.98□□□□□ -0.17
NPTX1-202ENST00000535681 SMARCA2P51531 1590 aa13.97□□□□□ -0.17
NPTX1-202ENST00000535681 RTL5Q5HYW3 569 aaPredicted RBP13.97□□□□□ -0.17
NPTX1-202ENST00000535681 SLC24A1O60721 1099 aa13.96□□□□□ -0.17
NPTX1-202ENST00000535681 RTN4Q9NQC3 1192 aaKnown RBP13.96□□□□□ -0.17
NPTX1-202ENST00000535681 SMARCA4P51532 1647 aa13.96□□□□□ -0.18
NPTX1-202ENST00000535681 CDK11AQ9UQ88 783 aaPredicted RBP13.96□□□□□ -0.18
NPTX1-202ENST00000535681 NBR1Q14596 966 aa13.95□□□□□ -0.18
NPTX1-202ENST00000535681 ATP1B4Q9UN42 357 aaPredicted RBP13.93□□□□□ -0.18
NPTX1-202ENST00000535681 GOLGA3Q08378 1498 aa13.93□□□□□ -0.18
NPTX1-202ENST00000535681 EEA1Q15075 1411 aa13.93□□□□□ -0.18
NPTX1-202ENST00000535681 FANCIQ9NVI1 1328 aa13.9□□□□□ -0.19
NPTX1-202ENST00000535681 PKNOX2Q96KN3 472 aa13.88□□□□□ -0.19
NPTX1-202ENST00000535681 CLIP1P30622 1438 aa13.87□□□□□ -0.19
NPTX1-202ENST00000535681 CEP164Q9UPV0 1460 aa13.81□□□□□ -0.2
NPTX1-202ENST00000535681 IL27Q8NEV9 243 aa13.79□□□□□ -0.2
NPTX1-202ENST00000535681 CNGB1Q14028 1251 aaPredicted RBP13.77□□□□□ -0.21
NPTX1-202ENST00000535681 GLIPR1L2Q4G1C9 344 aa13.76□□□□□ -0.21
NPTX1-202ENST00000535681 VPS8Q8N3P4 1428 aa13.75□□□□□ -0.21
NPTX1-202ENST00000535681 NOP58Q9Y2X3 529 aaKnown RBP13.74□□□□□ -0.21
NPTX1-202ENST00000535681 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
NPTX1-202ENST00000535681 SYNJ1O43426 1573 aa13.73□□□□□ -0.21
NPTX1-202ENST00000535681 PODXL2Q9NZ53 605 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms