RNA–Protein interactions for RNA: ENST00000534391.1

CHRNB3-203, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

TSL 3

Gene CHRNB3, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-203ENST00000534391 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
CHRNB3-203ENST00000534391 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
CHRNB3-203ENST00000534391 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
CHRNB3-203ENST00000534391 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
CHRNB3-203ENST00000534391 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
CHRNB3-203ENST00000534391 FOXD1Q16676 465 aa18.02■□□□□ 0.48
CHRNB3-203ENST00000534391 ADRA2BP18089 450 aa17.28■□□□□ 0.36
CHRNB3-203ENST00000534391 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
CHRNB3-203ENST00000534391 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
CHRNB3-203ENST00000534391 MSH5O43196 834 aa16.69■□□□□ 0.26
CHRNB3-203ENST00000534391 PPP4R3CPQ6ZMV5 832 aa15.94■□□□□ 0.14
CHRNB3-203ENST00000534391 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
CHRNB3-203ENST00000534391 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
CHRNB3-203ENST00000534391 NCBP3Q53F19 620 aaKnown RBP15.54■□□□□ 0.08
CHRNB3-203ENST00000534391 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
CHRNB3-203ENST00000534391 KCNA4P22459 653 aa15.5■□□□□ 0.07
CHRNB3-203ENST00000534391 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
CHRNB3-203ENST00000534391 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
CHRNB3-203ENST00000534391 NPM3O75607 178 aaKnown RBP15.26■□□□□ 0.03
CHRNB3-203ENST00000534391 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
CHRNB3-203ENST00000534391 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.03
CHRNB3-203ENST00000534391 HOXD11P31277 338 aaPredicted RBP15.14■□□□□ 0.01
CHRNB3-203ENST00000534391 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
CHRNB3-203ENST00000534391 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
CHRNB3-203ENST00000534391 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
CHRNB3-203ENST00000534391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.5□□□□□ -0.09
CHRNB3-203ENST00000534391 ABCC9O60706 1549 aa14.44□□□□□ -0.1
CHRNB3-203ENST00000534391 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
CHRNB3-203ENST00000534391 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
CHRNB3-203ENST00000534391 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
CHRNB3-203ENST00000534391 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
CHRNB3-203ENST00000534391 ZBTB22O15209 634 aa14.24□□□□□ -0.13
CHRNB3-203ENST00000534391 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.13
CHRNB3-203ENST00000534391 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
CHRNB3-203ENST00000534391 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
CHRNB3-203ENST00000534391 C1QBPQ07021 282 aaKnown RBP14.1□□□□□ -0.15
CHRNB3-203ENST00000534391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
CHRNB3-203ENST00000534391 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
CHRNB3-203ENST00000534391 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
CHRNB3-203ENST00000534391 CCDC180Q9P1Z9 1646 aa13.99□□□□□ -0.17
CHRNB3-203ENST00000534391 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
CHRNB3-203ENST00000534391 APLP2Q06481 763 aa13.95□□□□□ -0.18
CHRNB3-203ENST00000534391 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
CHRNB3-203ENST00000534391 CAPN15O75808 1086 aa13.82□□□□□ -0.2
CHRNB3-203ENST00000534391 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
CHRNB3-203ENST00000534391 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
CHRNB3-203ENST00000534391 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
CHRNB3-203ENST00000534391 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.21
CHRNB3-203ENST00000534391 ABCB7O75027 752 aa13.56□□□□□ -0.24
CHRNB3-203ENST00000534391 DSG3P32926 999 aa13.55□□□□□ -0.24
CHRNB3-203ENST00000534391 RB1CC1Q8TDY2 1594 aa13.53□□□□□ -0.24
CHRNB3-203ENST00000534391 POLA2Q14181 598 aa13.48□□□□□ -0.25
CHRNB3-203ENST00000534391 PABPN1Q86U42 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
CHRNB3-203ENST00000534391 NACADO15069 1562 aa13.36□□□□□ -0.27
CHRNB3-203ENST00000534391 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
CHRNB3-203ENST00000534391 DCAF8L2P0C7V8 631 aa13.26□□□□□ -0.29
CHRNB3-203ENST00000534391 FBLN2P98095 1184 aa13.23□□□□□ -0.29
CHRNB3-203ENST00000534391 UNC13AQ9UPW8 1703 aa13.22□□□□□ -0.29
CHRNB3-203ENST00000534391 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
CHRNB3-203ENST00000534391 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
CHRNB3-203ENST00000534391 DNAJC5Q9H3Z4 198 aa13.08□□□□□ -0.32
CHRNB3-203ENST00000534391 MYO15BQ96JP2 1530 aa13.06□□□□□ -0.32
CHRNB3-203ENST00000534391 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
CHRNB3-203ENST00000534391 CECR2Q9BXF3 1484 aa13.04□□□□□ -0.32
CHRNB3-203ENST00000534391 CC2D2AQ9P2K1 1620 aa13□□□□□ -0.33
CHRNB3-203ENST00000534391 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
CHRNB3-203ENST00000534391 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
CHRNB3-203ENST00000534391 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
CHRNB3-203ENST00000534391 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
CHRNB3-203ENST00000534391 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
CHRNB3-203ENST00000534391 EIF4G1Q04637 1599 aaKnown RBP12.88□□□□□ -0.35
CHRNB3-203ENST00000534391 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
CHRNB3-203ENST00000534391 ZNF692Q9BU19 519 aaPredicted RBP12.85□□□□□ -0.35
CHRNB3-203ENST00000534391 FKBP8Q14318 412 aa12.82□□□□□ -0.36
CHRNB3-203ENST00000534391 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
CHRNB3-203ENST00000534391 SSUH2Q9Y2M2 353 aa12.77□□□□□ -0.37
CHRNB3-203ENST00000534391 SCRIBQ14160 1630 aa12.75□□□□□ -0.37
CHRNB3-203ENST00000534391 DCAF1Q9Y4B6 1507 aa12.75□□□□□ -0.37
CHRNB3-203ENST00000534391 ZCCHC6Q5VYS8 1495 aaKnown RBP12.73□□□□□ -0.37
CHRNB3-203ENST00000534391 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
CHRNB3-203ENST00000534391 CUX2O14529 1486 aa12.58□□□□□ -0.4
CHRNB3-203ENST00000534391 PROM2Q8N271 834 aa12.57□□□□□ -0.4
CHRNB3-203ENST00000534391 SPDYE1Q8NFV5 336 aaPredicted RBP12.56□□□□□ -0.4
CHRNB3-203ENST00000534391 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
CHRNB3-203ENST00000534391 PITPNM1O00562 1244 aa12.5□□□□□ -0.41
CHRNB3-203ENST00000534391 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
CHRNB3-203ENST00000534391 ERCC6Q03468 1493 aa12.46□□□□□ -0.42
CHRNB3-203ENST00000534391 CHRDL2Q6WN34 429 aa12.43□□□□□ -0.42
CHRNB3-203ENST00000534391 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
CHRNB3-203ENST00000534391 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
CHRNB3-203ENST00000534391 NCAPD3P42695 1498 aa12.38□□□□□ -0.43
CHRNB3-203ENST00000534391 TRIM41Q8WV44 630 aa12.32□□□□□ -0.44
CHRNB3-203ENST00000534391 NESP48681 1621 aa12.3□□□□□ -0.44
CHRNB3-203ENST00000534391 ATAD2BQ9ULI0 1458 aa12.28□□□□□ -0.44
CHRNB3-203ENST00000534391 FXR2P51116 673 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHRNB3-203ENST00000534391 PIP4P2Q8N4L2 257 aa12.25□□□□□ -0.45
CHRNB3-203ENST00000534391 THOC2Q8NI27 1593 aaKnown RBP12.22□□□□□ -0.45
CHRNB3-203ENST00000534391 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
CHRNB3-203ENST00000534391 HMGXB3Q12766 1538 aa12.21□□□□□ -0.46
CHRNB3-203ENST00000534391 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms