RNA–Protein interactions for RNA: ENST00000531531.1

MS4A6A-214, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-214ENST00000531531 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
MS4A6A-214ENST00000531531 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
MS4A6A-214ENST00000531531 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
MS4A6A-214ENST00000531531 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
MS4A6A-214ENST00000531531 FOXD1Q16676 465 aa17.06■□□□□ 0.32
MS4A6A-214ENST00000531531 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
MS4A6A-214ENST00000531531 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
MS4A6A-214ENST00000531531 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
MS4A6A-214ENST00000531531 ADRA2BP18089 450 aa16.19■□□□□ 0.18
MS4A6A-214ENST00000531531 MSH5O43196 834 aa16.16■□□□□ 0.18
MS4A6A-214ENST00000531531 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
MS4A6A-214ENST00000531531 SCAF1Q9H7N4 1312 aaKnown RBP14.83□□□□□ -0.04
MS4A6A-214ENST00000531531 MAPK8IP2Q13387 824 aaPredicted RBP14.78□□□□□ -0.04
MS4A6A-214ENST00000531531 PPP4R3CPQ6ZMV5 832 aa14.76□□□□□ -0.05
MS4A6A-214ENST00000531531 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
MS4A6A-214ENST00000531531 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
MS4A6A-214ENST00000531531 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
MS4A6A-214ENST00000531531 CACNB1Q02641 598 aaPredicted RBP14.21□□□□□ -0.13
MS4A6A-214ENST00000531531 HOXD11P31277 338 aaPredicted RBP14.2□□□□□ -0.14
MS4A6A-214ENST00000531531 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
MS4A6A-214ENST00000531531 NISCHQ9Y2I1 1504 aa14.16□□□□□ -0.14
MS4A6A-214ENST00000531531 KCNA4P22459 653 aa14.1□□□□□ -0.15
MS4A6A-214ENST00000531531 NPM3O75607 178 aaKnown RBP14.07□□□□□ -0.16
MS4A6A-214ENST00000531531 DCAF8L1A6NGE4 600 aa13.99□□□□□ -0.17
MS4A6A-214ENST00000531531 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
MS4A6A-214ENST00000531531 ABCC9O60706 1549 aa13.65□□□□□ -0.22
MS4A6A-214ENST00000531531 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
MS4A6A-214ENST00000531531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
MS4A6A-214ENST00000531531 C1QBPQ07021 282 aaKnown RBP13.5□□□□□ -0.25
MS4A6A-214ENST00000531531 SLC4A1APQ9BWU0 796 aaKnown RBP13.38□□□□□ -0.27
MS4A6A-214ENST00000531531 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
MS4A6A-214ENST00000531531 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.29
MS4A6A-214ENST00000531531 DNAJC5Q9H3Z4 198 aa13.25□□□□□ -0.29
MS4A6A-214ENST00000531531 CCDC180Q9P1Z9 1646 aa13.06□□□□□ -0.32
MS4A6A-214ENST00000531531 FOXD4L1Q9NU39 408 aa13.05□□□□□ -0.32
MS4A6A-214ENST00000531531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
MS4A6A-214ENST00000531531 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
MS4A6A-214ENST00000531531 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
MS4A6A-214ENST00000531531 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
MS4A6A-214ENST00000531531 ZBTB22O15209 634 aa12.96□□□□□ -0.33
MS4A6A-214ENST00000531531 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
MS4A6A-214ENST00000531531 CAPN15O75808 1086 aa12.95□□□□□ -0.34
MS4A6A-214ENST00000531531 APLP2Q06481 763 aa12.94□□□□□ -0.34
MS4A6A-214ENST00000531531 POTEHQ6S545 545 aa12.91□□□□□ -0.34
MS4A6A-214ENST00000531531 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
MS4A6A-214ENST00000531531 DSG3P32926 999 aa12.8□□□□□ -0.36
MS4A6A-214ENST00000531531 ZNF219Q9P2Y4 722 aaPredicted RBP12.8□□□□□ -0.36
MS4A6A-214ENST00000531531 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
MS4A6A-214ENST00000531531 EHMT2Q96KQ7 1210 aa12.69□□□□□ -0.38
MS4A6A-214ENST00000531531 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
MS4A6A-214ENST00000531531 RB1CC1Q8TDY2 1594 aa12.69□□□□□ -0.38
MS4A6A-214ENST00000531531 ABCB7O75027 752 aa12.68□□□□□ -0.38
MS4A6A-214ENST00000531531 ATXN8OSP0DMR3 200 aa12.63□□□□□ -0.39
MS4A6A-214ENST00000531531 POLA2Q14181 598 aa12.58□□□□□ -0.4
MS4A6A-214ENST00000531531 UNC13AQ9UPW8 1703 aa12.57□□□□□ -0.4
MS4A6A-214ENST00000531531 PABPN1Q86U42 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
MS4A6A-214ENST00000531531 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
MS4A6A-214ENST00000531531 NACADO15069 1562 aa12.43□□□□□ -0.42
MS4A6A-214ENST00000531531 CECR2Q9BXF3 1484 aa12.36□□□□□ -0.43
MS4A6A-214ENST00000531531 CC2D2AQ9P2K1 1620 aa12.35□□□□□ -0.43
MS4A6A-214ENST00000531531 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
MS4A6A-214ENST00000531531 RBM42Q9BTD8 480 aaKnown RBP12.19□□□□□ -0.46
MS4A6A-214ENST00000531531 FBLN2P98095 1184 aa12.16□□□□□ -0.46
MS4A6A-214ENST00000531531 EIF4G1Q04637 1599 aaKnown RBP12.15□□□□□ -0.46
MS4A6A-214ENST00000531531 MKRN4PQ13434 485 aaPredicted RBP12.12□□□□□ -0.47
MS4A6A-214ENST00000531531 OSCARQ8IYS5 282 aa12.12□□□□□ -0.47
MS4A6A-214ENST00000531531 SHROOM4Q9ULL8 1493 aa12.11□□□□□ -0.47
MS4A6A-214ENST00000531531 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
MS4A6A-214ENST00000531531 MYO15BQ96JP2 1530 aa12.06□□□□□ -0.48
MS4A6A-214ENST00000531531 CUX2O14529 1486 aa12.04□□□□□ -0.48
MS4A6A-214ENST00000531531 CHRDL2Q6WN34 429 aa12.04□□□□□ -0.48
MS4A6A-214ENST00000531531 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
MS4A6A-214ENST00000531531 AKT1S1Q96B36 256 aa11.99□□□□□ -0.49
MS4A6A-214ENST00000531531 SPDYE2BA6NHP3 402 aa11.97□□□□□ -0.49
MS4A6A-214ENST00000531531 SPDYE6P0CI01 402 aa11.97□□□□□ -0.49
MS4A6A-214ENST00000531531 SPDYE2Q495Y8 402 aa11.97□□□□□ -0.49
MS4A6A-214ENST00000531531 ZNF692Q9BU19 519 aaPredicted RBP11.9□□□□□ -0.5
MS4A6A-214ENST00000531531 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
MS4A6A-214ENST00000531531 SP7Q8TDD2 431 aaPredicted RBP11.86□□□□□ -0.51
MS4A6A-214ENST00000531531 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
MS4A6A-214ENST00000531531 SCRIBQ14160 1630 aa11.82□□□□□ -0.52
MS4A6A-214ENST00000531531 ERCC6Q03468 1493 aa11.75□□□□□ -0.53
MS4A6A-214ENST00000531531 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
MS4A6A-214ENST00000531531 SPDYE4A6NLX3 237 aa11.72□□□□□ -0.53
MS4A6A-214ENST00000531531 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
MS4A6A-214ENST00000531531 THOC2Q8NI27 1593 aaKnown RBP11.67□□□□□ -0.54
MS4A6A-214ENST00000531531 DCAF1Q9Y4B6 1507 aa11.66□□□□□ -0.54
MS4A6A-214ENST00000531531 HAX1O00165 279 aa11.66□□□□□ -0.54
MS4A6A-214ENST00000531531 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
MS4A6A-214ENST00000531531 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
MS4A6A-214ENST00000531531 PIP4P2Q8N4L2 257 aa11.6□□□□□ -0.55
MS4A6A-214ENST00000531531 NESP48681 1621 aa11.59□□□□□ -0.55
MS4A6A-214ENST00000531531 FXR2P51116 673 aaKnown RBP eCLIP11.58□□□□□ -0.56
MS4A6A-214ENST00000531531 ILDR1Q86SU0 546 aaPredicted RBP11.57□□□□□ -0.56
MS4A6A-214ENST00000531531 PRR29P0C7W0 189 aa11.52□□□□□ -0.57
MS4A6A-214ENST00000531531 NCAPD3P42695 1498 aa11.5□□□□□ -0.57
MS4A6A-214ENST00000531531 STAG3Q9UJ98 1225 aa11.48□□□□□ -0.57
MS4A6A-214ENST00000531531 FKBP8Q14318 412 aa11.47□□□□□ -0.57
MS4A6A-214ENST00000531531 PROM2Q8N271 834 aa11.47□□□□□ -0.57
MS4A6A-214ENST00000531531 KIF21AQ7Z4S6 1674 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms