RNA–Protein interactions for RNA: ENST00000527498.1

PUM1-219, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-219ENST00000527498 CHIC1Q5VXU3 224 aa11.56□□□□□ -0.56
PUM1-219ENST00000527498 AEBP2Q6ZN18 517 aaPredicted RBP11.29□□□□□ -0.6
PUM1-219ENST00000527498 PHF23Q9BUL5 403 aaPredicted RBP10.16□□□□□ -0.78
PUM1-219ENST00000527498 SENP3Q9H4L4 574 aaPredicted RBP9.76□□□□□ -0.85
PUM1-219ENST00000527498 PLPPR3Q6T4P5 718 aa9.7□□□□□ -0.86
PUM1-219ENST00000527498 FOXD1Q16676 465 aa9.08□□□□□ -0.96
PUM1-219ENST00000527498 EHMT2Q96KQ7 1210 aa9.08□□□□□ -0.96
PUM1-219ENST00000527498 KCNA4P22459 653 aa8.97□□□□□ -0.97
PUM1-219ENST00000527498 ADRA2BP18089 450 aa8.93□□□□□ -0.98
PUM1-219ENST00000527498 NISCHQ9Y2I1 1504 aa8.9□□□□□ -0.98
PUM1-219ENST00000527498 POTEDQ86YR6 584 aa8.83□□□□□ -1
PUM1-219ENST00000527498 PPP6R1Q9UPN7 881 aa8.76□□□□□ -1.01
PUM1-219ENST00000527498 SLC4A1APQ9BWU0 796 aaKnown RBP8.71□□□□□ -1.02
PUM1-219ENST00000527498 CSRNP3Q8WYN3 585 aa8.69□□□□□ -1.02
PUM1-219ENST00000527498 MSH5O43196 834 aa8.67□□□□□ -1.02
PUM1-219ENST00000527498 NCBP3Q53F19 620 aaKnown RBP8.61□□□□□ -1.03
PUM1-219ENST00000527498 PPP4R3CPQ6ZMV5 832 aa8.57□□□□□ -1.04
PUM1-219ENST00000527498 ABCC9O60706 1549 aa8.47□□□□□ -1.05
PUM1-219ENST00000527498 PIAS4Q8N2W9 510 aaPredicted RBP8.43□□□□□ -1.06
PUM1-219ENST00000527498 NPM3O75607 178 aaKnown RBP8.37□□□□□ -1.07
PUM1-219ENST00000527498 SLC24A1O60721 1099 aa8.35□□□□□ -1.07
PUM1-219ENST00000527498 CNKSR2Q8WXI2 1034 aa8.25□□□□□ -1.09
PUM1-219ENST00000527498 AMER1Q5JTC6 1135 aaPredicted RBP8.24□□□□□ -1.09
PUM1-219ENST00000527498 SCAF1Q9H7N4 1312 aaKnown RBP8.23□□□□□ -1.09
PUM1-219ENST00000527498 ZBTB22O15209 634 aa8.22□□□□□ -1.09
PUM1-219ENST00000527498 DNAJC5BQ9UF47 199 aa8.22□□□□□ -1.09
PUM1-219ENST00000527498 CCDC180Q9P1Z9 1646 aa8.18□□□□□ -1.1
PUM1-219ENST00000527498 FOXD4L1Q9NU39 408 aa8.17□□□□□ -1.1
PUM1-219ENST00000527498 RTN4Q9NQC3 1192 aaKnown RBP8.13□□□□□ -1.11
PUM1-219ENST00000527498 RNF216Q9NWF9 866 aaPredicted RBP7.95□□□□□ -1.14
PUM1-219ENST00000527498 RB1CC1Q8TDY2 1594 aa7.92□□□□□ -1.14
PUM1-219ENST00000527498 ATXN8OSP0DMR3 200 aa7.89□□□□□ -1.15
PUM1-219ENST00000527498 FKBP8Q14318 412 aa7.85□□□□□ -1.15
PUM1-219ENST00000527498 UNC13AQ9UPW8 1703 aa7.82□□□□□ -1.16
PUM1-219ENST00000527498 PABPN1Q86U42 306 aaKnown RBP eCLIP7.81□□□□□ -1.16
PUM1-219ENST00000527498 MAPK8IP2Q13387 824 aaPredicted RBP7.8□□□□□ -1.16
PUM1-219ENST00000527498 MYCNP04198 464 aaPredicted RBP7.78□□□□□ -1.16
PUM1-219ENST00000527498 NACADO15069 1562 aa7.77□□□□□ -1.17
PUM1-219ENST00000527498 DNAJC5Q9H3Z4 198 aa7.76□□□□□ -1.17
PUM1-219ENST00000527498 HOXD11P31277 338 aaPredicted RBP7.74□□□□□ -1.17
PUM1-219ENST00000527498 SLC4A2P04920 1241 aa7.73□□□□□ -1.17
PUM1-219ENST00000527498 BICRAQ9NZM4 1560 aa7.71□□□□□ -1.17
PUM1-219ENST00000527498 DMRT2Q9Y5R5 561 aa7.68□□□□□ -1.18
PUM1-219ENST00000527498 DCAF8L2P0C7V8 631 aa7.65□□□□□ -1.18
PUM1-219ENST00000527498 CECR2Q9BXF3 1484 aa7.65□□□□□ -1.18
PUM1-219ENST00000527498 CC2D2AQ9P2K1 1620 aa7.65□□□□□ -1.18
PUM1-219ENST00000527498 CACNB1Q02641 598 aaPredicted RBP7.56□□□□□ -1.2
PUM1-219ENST00000527498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.54□□□□□ -1.2
PUM1-219ENST00000527498 HNRNPUL2Q1KMD3 747 aaKnown RBP7.54□□□□□ -1.2
PUM1-219ENST00000527498 EIF4G1Q04637 1599 aaKnown RBP7.54□□□□□ -1.2
PUM1-219ENST00000527498 PLCB2Q00722 1185 aa7.53□□□□□ -1.2
PUM1-219ENST00000527498 FBXO3Q9UK99 471 aa7.53□□□□□ -1.2
PUM1-219ENST00000527498 MYO15BQ96JP2 1530 aa7.52□□□□□ -1.2
PUM1-219ENST00000527498 SHROOM4Q9ULL8 1493 aa7.52□□□□□ -1.21
PUM1-219ENST00000527498 SAMD1Q6SPF0 538 aaPredicted RBP7.5□□□□□ -1.21
PUM1-219ENST00000527498 BCANQ96GW7 911 aa7.46□□□□□ -1.22
PUM1-219ENST00000527498 SCRIBQ14160 1630 aa7.43□□□□□ -1.22
PUM1-219ENST00000527498 CUX2O14529 1486 aa7.42□□□□□ -1.22
PUM1-219ENST00000527498 HAP1P54257 671 aaPredicted RBP7.41□□□□□ -1.22
PUM1-219ENST00000527498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.4□□□□□ -1.223e-7■■□□□ 11.7
PUM1-219ENST00000527498 ATF5Q9Y2D1 282 aaPredicted RBP7.4□□□□□ -1.22
PUM1-219ENST00000527498 VSIG10Q8N0Z9 540 aa7.37□□□□□ -1.23
PUM1-219ENST00000527498 DCAF8L1A6NGE4 600 aa7.35□□□□□ -1.23
PUM1-219ENST00000527498 APLP2Q06481 763 aa7.35□□□□□ -1.23
PUM1-219ENST00000527498 SPDYE4A6NLX3 237 aa7.33□□□□□ -1.24
PUM1-219ENST00000527498 RNF39Q9H2S5 420 aa7.33□□□□□ -1.24
PUM1-219ENST00000527498 DCAF1Q9Y4B6 1507 aa7.32□□□□□ -1.24
PUM1-219ENST00000527498 ERCC6Q03468 1493 aa7.32□□□□□ -1.24
PUM1-219ENST00000527498 VASPP50552 380 aaPredicted RBP7.32□□□□□ -1.24
PUM1-219ENST00000527498 ZNF219Q9P2Y4 722 aaPredicted RBP7.32□□□□□ -1.24
PUM1-219ENST00000527498 ZCCHC6Q5VYS8 1495 aaKnown RBP7.31□□□□□ -1.24
PUM1-219ENST00000527498 TRIM41Q8WV44 630 aa7.31□□□□□ -1.24
PUM1-219ENST00000527498 TAOK2Q9UL54 1235 aa7.31□□□□□ -1.24
PUM1-219ENST00000527498 U3KPZ7 1027 aaPredicted RBP7.28□□□□□ -1.24
PUM1-219ENST00000527498 PROM2Q8N271 834 aa7.27□□□□□ -1.25
PUM1-219ENST00000527498 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.27□□□□□ -1.25
PUM1-219ENST00000527498 C1QBPQ07021 282 aaKnown RBP7.25□□□□□ -1.25
PUM1-219ENST00000527498 PRKCSHP14314 528 aaPredicted RBP7.24□□□□□ -1.25
PUM1-219ENST00000527498 IFNLR1Q8IU57 520 aaPredicted RBP7.23□□□□□ -1.25
PUM1-219ENST00000527498 FBLN2P98095 1184 aa7.22□□□□□ -1.25
PUM1-219ENST00000527498 BBXQ8WY36 941 aaPredicted RBP7.21□□□□□ -1.26
PUM1-219ENST00000527498 THOC2Q8NI27 1593 aaKnown RBP7.2□□□□□ -1.26
PUM1-219ENST00000527498 PKD2Q13563 968 aa7.2□□□□□ -1.26
PUM1-219ENST00000527498 NESP48681 1621 aa7.19□□□□□ -1.26
PUM1-219ENST00000527498 TPRNQ4KMQ1 711 aa7.17□□□□□ -1.26
PUM1-219ENST00000527498 NCAPD3P42695 1498 aa7.16□□□□□ -1.26
PUM1-219ENST00000527498 KIF21AQ7Z4S6 1674 aa7.14□□□□□ -1.27
PUM1-219ENST00000527498 SMARCA2P51531 1590 aa7.13□□□□□ -1.27
PUM1-219ENST00000527498 MKRN4PQ13434 485 aaPredicted RBP7.13□□□□□ -1.27
PUM1-219ENST00000527498 PAXIP1Q6ZW49 1069 aaPredicted RBP7.13□□□□□ -1.27
PUM1-219ENST00000527498 SPOCK2Q92563 424 aa7.12□□□□□ -1.27
PUM1-219ENST00000527498 ECM2O94769 699 aaPredicted RBP7.11□□□□□ -1.27
PUM1-219ENST00000527498 CFAP44Q96MT7 982 aa7.11□□□□□ -1.27
PUM1-219ENST00000527498 KDM2AQ9Y2K7 1162 aa7.11□□□□□ -1.27
PUM1-219ENST00000527498 ATAD2BQ9ULI0 1458 aa7.11□□□□□ -1.27
PUM1-219ENST00000527498 KLHL34Q8N239 644 aa7.1□□□□□ -1.27
PUM1-219ENST00000527498 HMGXB3Q12766 1538 aa7.1□□□□□ -1.27
PUM1-219ENST00000527498 SPRYD3Q8NCJ5 442 aa7.09□□□□□ -1.27
PUM1-219ENST00000527498 BAZ1AQ9NRL2 1556 aaPredicted RBP7.08□□□□□ -1.28
PUM1-219ENST00000527498 LAMC3Q9Y6N6 1575 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms