RNA–Protein interactions for RNA: ENST00000527224.1

PACS1-205, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 3,024 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-205ENST00000527224 NISCHQ9Y2I1 1504 aa33.86■■■■□ 3.01
PACS1-205ENST00000527224 HRCP23327 699 aa31.79■■■□□ 2.68
PACS1-205ENST00000527224 PPARGC1BQ86YN6 1023 aaKnown RBP31.51■■■□□ 2.63
PACS1-205ENST00000527224 PELP1Q8IZL8 1130 aaKnown RBP31.34■■■□□ 2.61
PACS1-205ENST00000527224 PCGF6Q9BYE7 350 aa31.1■■■□□ 2.57
PACS1-205ENST00000527224 SCAF1Q9H7N4 1312 aaKnown RBP30.61■■■□□ 2.49
PACS1-205ENST00000527224 SUPT5HO00267 1087 aaKnown RBP30.52■■■□□ 2.48
PACS1-205ENST00000527224 SHROOM4Q9ULL8 1493 aa30.39■■■□□ 2.46
PACS1-205ENST00000527224 MYO15BQ96JP2 1530 aa30.37■■■□□ 2.45
PACS1-205ENST00000527224 MYT1Q01538 1121 aa30.17■■■□□ 2.42
PACS1-205ENST00000527224 CHIC1Q5VXU3 224 aa29.95■■■□□ 2.39
PACS1-205ENST00000527224 LOC105371045A0A1W2PR82 267 aa29.61■■■□□ 2.33
PACS1-205ENST00000527224 TRIM26Q12899 539 aaPredicted RBP29.6■■■□□ 2.33
PACS1-205ENST00000527224 NEUROD1Q13562 356 aa29.56■■■□□ 2.32
PACS1-205ENST00000527224 ACIN1Q9UKV3 1341 aaKnown RBP29.51■■■□□ 2.32
PACS1-205ENST00000527224 DCAF1Q9Y4B6 1507 aa29.51■■■□□ 2.31
PACS1-205ENST00000527224 GTF3C3Q9Y5Q9 886 aa29.47■■■□□ 2.31
PACS1-205ENST00000527224 ZEB1P37275 1124 aaPredicted RBP29.39■■■□□ 2.3
PACS1-205ENST00000527224 CCDC180Q9P1Z9 1646 aa29.24■■■□□ 2.27
PACS1-205ENST00000527224 CENPBP07199 599 aaPredicted RBP28.98■■■□□ 2.23
PACS1-205ENST00000527224 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
PACS1-205ENST00000527224 DIEXFQ68CQ4 756 aaKnown RBP28.73■■■□□ 2.19
PACS1-205ENST00000527224 BCL11AQ9H165 835 aa28.68■■■□□ 2.18
PACS1-205ENST00000527224 YTHDC1Q96MU7 727 aaKnown RBP28.67■■■□□ 2.18
PACS1-205ENST00000527224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.62■■■□□ 2.17
PACS1-205ENST00000527224 EHMT2Q96KQ7 1210 aa28.53■■■□□ 2.16
PACS1-205ENST00000527224 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
PACS1-205ENST00000527224 FAM9AQ8IZU1 332 aaPredicted RBP28.53■■■□□ 2.16
PACS1-205ENST00000527224 CCER1Q8TC90 406 aaPredicted RBP28.47■■■□□ 2.15
PACS1-205ENST00000527224 TTBK1Q5TCY1 1321 aaPredicted RBP28.37■■■□□ 2.13
PACS1-205ENST00000527224 ANP32EQ9BTT0 268 aa28.15■■■□□ 2.1
PACS1-205ENST00000527224 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
PACS1-205ENST00000527224 CSRNP3Q8WYN3 585 aa28.06■■■□□ 2.08
PACS1-205ENST00000527224 MIER1Q8N108 512 aa28■■■□□ 2.07
PACS1-205ENST00000527224 PRKCSHP14314 528 aaPredicted RBP27.98■■■□□ 2.07
PACS1-205ENST00000527224 ZNF316A6NFI3 1004 aaPredicted RBP27.91■■■□□ 2.06
PACS1-205ENST00000527224 TSHZ2Q9NRE2 1034 aa27.86■■■□□ 2.05
PACS1-205ENST00000527224 SUPT16HQ9Y5B9 1047 aaKnown RBP27.79■■■□□ 2.04
PACS1-205ENST00000527224 BCANQ96GW7 911 aa27.44■■□□□ 1.98
PACS1-205ENST00000527224 ABCC9O60706 1549 aa27.28■■□□□ 1.96
PACS1-205ENST00000527224 SCRIBQ14160 1630 aa27.22■■□□□ 1.95
PACS1-205ENST00000527224 CLSPNQ9HAW4 1339 aa27.22■■□□□ 1.95
PACS1-205ENST00000527224 RBM19Q9Y4C8 960 aaKnown RBP27.14■■□□□ 1.94
PACS1-205ENST00000527224 HNRNPUL2Q1KMD3 747 aaKnown RBP27.08■■□□□ 1.93
PACS1-205ENST00000527224 MSH5O43196 834 aa27.03■■□□□ 1.92
PACS1-205ENST00000527224 FKBP8Q14318 412 aa27.02■■□□□ 1.92
PACS1-205ENST00000527224 ERICH6Q7L0X2 663 aa27■■□□□ 1.91
PACS1-205ENST00000527224 ITGAEP38570 1179 aa26.98■■□□□ 1.91
PACS1-205ENST00000527224 ANO8Q9HCE9 1232 aaPredicted RBP26.98■■□□□ 1.91
PACS1-205ENST00000527224 KCNH8Q96L42 1107 aa26.94■■□□□ 1.9
PACS1-205ENST00000527224 RB1CC1Q8TDY2 1594 aa26.93■■□□□ 1.9
PACS1-205ENST00000527224 RSF1Q96T23 1441 aaPredicted RBP26.85■■□□□ 1.89
PACS1-205ENST00000527224 DEKP35659 375 aaKnown RBP26.71■■□□□ 1.87
PACS1-205ENST00000527224 WRNQ14191 1432 aaPredicted RBP eCLIP26.69■■□□□ 1.86
PACS1-205ENST00000527224 APLP2Q06481 763 aa26.68■■□□□ 1.86
PACS1-205ENST00000527224 CEP162Q5TB80 1403 aa26.68■■□□□ 1.86
PACS1-205ENST00000527224 NACADO15069 1562 aa26.66■■□□□ 1.86
PACS1-205ENST00000527224 CCDC136Q96JN2 1154 aa26.64■■□□□ 1.85
PACS1-205ENST00000527224 SALL2Q9Y467 1007 aaPredicted RBP26.63■■□□□ 1.85
PACS1-205ENST00000527224 NEFLP07196 543 aa26.62■■□□□ 1.85
PACS1-205ENST00000527224 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
PACS1-205ENST00000527224 UBTFP17480 764 aaKnown RBP26.51■■□□□ 1.83
PACS1-205ENST00000527224 TRIM52Q96A61 297 aa26.47■■□□□ 1.83
PACS1-205ENST00000527224 NBR1Q14596 966 aa26.44■■□□□ 1.82
PACS1-205ENST00000527224 FANCIQ9NVI1 1328 aa26.43■■□□□ 1.82
PACS1-205ENST00000527224 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
PACS1-205ENST00000527224 IRX6P78412 446 aaPredicted RBP26.39■■□□□ 1.81
PACS1-205ENST00000527224 RTN4Q9NQC3 1192 aaKnown RBP26.36■■□□□ 1.81
PACS1-205ENST00000527224 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.36■■□□□ 1.81
PACS1-205ENST00000527224 CDK11AQ9UQ88 783 aaPredicted RBP26.3■■□□□ 1.8
PACS1-205ENST00000527224 TNIKQ9UKE5 1360 aa26.28■■□□□ 1.8
PACS1-205ENST00000527224 WIZO95785 1651 aa26.27■■□□□ 1.8
PACS1-205ENST00000527224 DDX10Q13206 875 aaKnown RBP26.26■■□□□ 1.79
PACS1-205ENST00000527224 MYT1LQ9UL68 1186 aa26.26■■□□□ 1.79
PACS1-205ENST00000527224 IL27Q8NEV9 243 aa26.25■■□□□ 1.79
PACS1-205ENST00000527224 DHX57Q6P158 1386 aaKnown RBP26.23■■□□□ 1.79
PACS1-205ENST00000527224 PABPN1Q86U42 306 aaKnown RBP eCLIP26.22■■□□□ 1.79
PACS1-205ENST00000527224 SOGA1O94964 1423 aa26.21■■□□□ 1.79
PACS1-205ENST00000527224 ABCC8Q09428 1581 aa26.21■■□□□ 1.79
PACS1-205ENST00000527224 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
PACS1-205ENST00000527224 RANGAP1P46060 587 aaPredicted RBP26.19■■□□□ 1.78
PACS1-205ENST00000527224 PAK3O75914 559 aaPredicted RBP26.12■■□□□ 1.77
PACS1-205ENST00000527224 HIRIP3Q9BW71 556 aaPredicted RBP26.07■■□□□ 1.76
PACS1-205ENST00000527224 RUSC2Q8N2Y8 1516 aa26.06■■□□□ 1.76
PACS1-205ENST00000527224 UBE2Q2Q8WVN8 375 aa26.05■■□□□ 1.76
PACS1-205ENST00000527224 ERICH6BQ5W0A0 696 aa26.05■■□□□ 1.76
PACS1-205ENST00000527224 NOP58Q9Y2X3 529 aaKnown RBP26.04■■□□□ 1.76
PACS1-205ENST00000527224 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
PACS1-205ENST00000527224 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
PACS1-205ENST00000527224 RTL5Q5HYW3 569 aaPredicted RBP25.92■■□□□ 1.74
PACS1-205ENST00000527224 B4GALNT3Q6L9W6 998 aa25.88■■□□□ 1.73
PACS1-205ENST00000527224 ANP32CO43423 234 aa25.86■■□□□ 1.73
PACS1-205ENST00000527224 EIF5BO60841 1220 aaKnown RBP25.86■■□□□ 1.73
PACS1-205ENST00000527224 CLIP1P30622 1438 aa25.86■■□□□ 1.73
PACS1-205ENST00000527224 HNRNPUQ00839 825 aaKnown RBP eCLIP25.85■■□□□ 1.73
PACS1-205ENST00000527224 GOLGA3Q08378 1498 aa25.85■■□□□ 1.73
PACS1-205ENST00000527224 PPP1R15AO75807 674 aaPredicted RBP25.81■■□□□ 1.72
PACS1-205ENST00000527224 SMARCA4P51532 1647 aa25.81■■□□□ 1.72
PACS1-205ENST00000527224 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
PACS1-205ENST00000527224 VPS8Q8N3P4 1428 aa25.76■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 731.8 ms