RNA–Protein interactions for RNA: ENST00000526075.1

LETM2-209, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, humanhuman

TSL 2

Gene LETM2, Length 986 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM2-209ENST00000526075 AEBP2Q6ZN18 517 aaPredicted RBP30.04■■■□□ 2.4
LETM2-209ENST00000526075 CHIC1Q5VXU3 224 aa29.52■■■□□ 2.32
LETM2-209ENST00000526075 PHF23Q9BUL5 403 aaPredicted RBP26■■□□□ 1.75
LETM2-209ENST00000526075 NISCHQ9Y2I1 1504 aa25.58■■□□□ 1.68
LETM2-209ENST00000526075 SENP3Q9H4L4 574 aaPredicted RBP25.45■■□□□ 1.66
LETM2-209ENST00000526075 PLPPR3Q6T4P5 718 aa24.06■■□□□ 1.44
LETM2-209ENST00000526075 FOXD1Q16676 465 aa23.61■■□□□ 1.37
LETM2-209ENST00000526075 PPP6R1Q9UPN7 881 aa22.89■■□□□ 1.25
LETM2-209ENST00000526075 ADRA2BP18089 450 aa22.87■■□□□ 1.25
LETM2-209ENST00000526075 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
LETM2-209ENST00000526075 ABCC9O60706 1549 aa22.63■■□□□ 1.21
LETM2-209ENST00000526075 PIAS4Q8N2W9 510 aaPredicted RBP22.31■■□□□ 1.16
LETM2-209ENST00000526075 MSH5O43196 834 aa21.68■■□□□ 1.06
LETM2-209ENST00000526075 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
LETM2-209ENST00000526075 NACADO15069 1562 aa21.57■■□□□ 1.04
LETM2-209ENST00000526075 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
LETM2-209ENST00000526075 MYO15BQ96JP2 1530 aa21.37■■□□□ 1.01
LETM2-209ENST00000526075 PPP4R3CPQ6ZMV5 832 aa21.24■□□□□ 0.99
LETM2-209ENST00000526075 ZCCHC6Q5VYS8 1495 aaKnown RBP21.21■□□□□ 0.99
LETM2-209ENST00000526075 DCAF1Q9Y4B6 1507 aa21.17■□□□□ 0.98
LETM2-209ENST00000526075 PABPN1Q86U42 306 aaKnown RBP eCLIP21.15■□□□□ 0.98
LETM2-209ENST00000526075 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
LETM2-209ENST00000526075 UNC13AQ9UPW8 1703 aa21.11■□□□□ 0.97
LETM2-209ENST00000526075 BICRAQ9NZM4 1560 aa21.01■□□□□ 0.95
LETM2-209ENST00000526075 KCNA4P22459 653 aa20.97■□□□□ 0.95
LETM2-209ENST00000526075 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
LETM2-209ENST00000526075 SCRIBQ14160 1630 aa20.78■□□□□ 0.92
LETM2-209ENST00000526075 SHROOM4Q9ULL8 1493 aa20.77■□□□□ 0.92
LETM2-209ENST00000526075 NCBP3Q53F19 620 aaKnown RBP20.73■□□□□ 0.91
LETM2-209ENST00000526075 MAPK8IP2Q13387 824 aaPredicted RBP20.7■□□□□ 0.9
LETM2-209ENST00000526075 CNKSR2Q8WXI2 1034 aa20.59■□□□□ 0.89
LETM2-209ENST00000526075 EIF4G1Q04637 1599 aaKnown RBP20.46■□□□□ 0.87
LETM2-209ENST00000526075 CC2D2AQ9P2K1 1620 aa20.45■□□□□ 0.87
LETM2-209ENST00000526075 NPM3O75607 178 aaKnown RBP20.44■□□□□ 0.86
LETM2-209ENST00000526075 CECR2Q9BXF3 1484 aa20.38■□□□□ 0.85
LETM2-209ENST00000526075 POTEDQ86YR6 584 aa20.36■□□□□ 0.85
LETM2-209ENST00000526075 DMRT2Q9Y5R5 561 aa20.34■□□□□ 0.85
LETM2-209ENST00000526075 RNF216Q9NWF9 866 aaPredicted RBP20.14■□□□□ 0.81
LETM2-209ENST00000526075 HOXD11P31277 338 aaPredicted RBP20.01■□□□□ 0.79
LETM2-209ENST00000526075 SLC4A1APQ9BWU0 796 aaKnown RBP20■□□□□ 0.79
LETM2-209ENST00000526075 NCAPD3P42695 1498 aa19.94■□□□□ 0.78
LETM2-209ENST00000526075 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
LETM2-209ENST00000526075 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
LETM2-209ENST00000526075 BAZ1AQ9NRL2 1556 aaPredicted RBP19.83■□□□□ 0.77
LETM2-209ENST00000526075 SMARCA2P51531 1590 aa19.83■□□□□ 0.76
LETM2-209ENST00000526075 HMGXB3Q12766 1538 aa19.76■□□□□ 0.75
LETM2-209ENST00000526075 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
LETM2-209ENST00000526075 MROH2BQ7Z745 1585 aa19.69■□□□□ 0.74
LETM2-209ENST00000526075 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
LETM2-209ENST00000526075 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
LETM2-209ENST00000526075 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
LETM2-209ENST00000526075 NESP48681 1621 aa19.5■□□□□ 0.71
LETM2-209ENST00000526075 DCAF8L1A6NGE4 600 aa19.47■□□□□ 0.71
LETM2-209ENST00000526075 CUX2O14529 1486 aa19.45■□□□□ 0.7
LETM2-209ENST00000526075 WIZO95785 1651 aa19.45■□□□□ 0.7
LETM2-209ENST00000526075 LAMC3Q9Y6N6 1575 aa19.41■□□□□ 0.7
LETM2-209ENST00000526075 RSF1Q96T23 1441 aaPredicted RBP19.39■□□□□ 0.69
LETM2-209ENST00000526075 CSRNP3Q8WYN3 585 aa19.36■□□□□ 0.69
LETM2-209ENST00000526075 CADPSQ9ULU8 1353 aa19.34■□□□□ 0.69
LETM2-209ENST00000526075 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
LETM2-209ENST00000526075 ZBTB22O15209 634 aa19.3■□□□□ 0.68
LETM2-209ENST00000526075 DNAJC5Q9H3Z4 198 aa19.27■□□□□ 0.68
LETM2-209ENST00000526075 SLC4A2P04920 1241 aa19.25■□□□□ 0.67
LETM2-209ENST00000526075 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
LETM2-209ENST00000526075 FOXD4L1Q9NU39 408 aa19.23■□□□□ 0.67
LETM2-209ENST00000526075 TOP2AP11388 1531 aaKnown RBP19.22■□□□□ 0.67
LETM2-209ENST00000526075 KIF21AQ7Z4S6 1674 aa19.22■□□□□ 0.67
LETM2-209ENST00000526075 CFTRP13569 1480 aa19.16■□□□□ 0.66
LETM2-209ENST00000526075 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
LETM2-209ENST00000526075 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
LETM2-209ENST00000526075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.07■□□□□ 0.64
LETM2-209ENST00000526075 CEP164Q9UPV0 1460 aa19.07■□□□□ 0.64
LETM2-209ENST00000526075 WDR62O43379 1518 aa19.05■□□□□ 0.64
LETM2-209ENST00000526075 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
LETM2-209ENST00000526075 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
LETM2-209ENST00000526075 PRDM2Q13029 1718 aa18.9■□□□□ 0.62
LETM2-209ENST00000526075 MYCNP04198 464 aaPredicted RBP18.87■□□□□ 0.61
LETM2-209ENST00000526075 U3KPZ7 1027 aaPredicted RBP18.78■□□□□ 0.6
LETM2-209ENST00000526075 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
LETM2-209ENST00000526075 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
LETM2-209ENST00000526075 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
LETM2-209ENST00000526075 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
LETM2-209ENST00000526075 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
LETM2-209ENST00000526075 OSCARQ8IYS5 282 aa18.66■□□□□ 0.58
LETM2-209ENST00000526075 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.57
LETM2-209ENST00000526075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
LETM2-209ENST00000526075 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
LETM2-209ENST00000526075 RNF39Q9H2S5 420 aa18.6■□□□□ 0.57
LETM2-209ENST00000526075 POLA1P09884 1462 aaPredicted RBP18.56■□□□□ 0.56
LETM2-209ENST00000526075 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
LETM2-209ENST00000526075 ATXN8OSP0DMR3 200 aa18.54■□□□□ 0.56
LETM2-209ENST00000526075 SAMD1Q6SPF0 538 aaPredicted RBP18.54■□□□□ 0.56
LETM2-209ENST00000526075 SOGA1O94964 1423 aa18.52■□□□□ 0.56
LETM2-209ENST00000526075 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.55
LETM2-209ENST00000526075 EIF4G3O43432 1585 aaKnown RBP18.51■□□□□ 0.55
LETM2-209ENST00000526075 RAD54L2Q9Y4B4 1467 aa18.49■□□□□ 0.55
LETM2-209ENST00000526075 CUX1P39880 1505 aa18.49■□□□□ 0.55
LETM2-209ENST00000526075 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
LETM2-209ENST00000526075 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
LETM2-209ENST00000526075 TRIM41Q8WV44 630 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms