RNA–Protein interactions for RNA: ENST00000521686.1

MSRA-207, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 3

Gene MSRA, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-207ENST00000521686 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
MSRA-207ENST00000521686 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
MSRA-207ENST00000521686 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
MSRA-207ENST00000521686 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
MSRA-207ENST00000521686 FOXD1Q16676 465 aa19.33■□□□□ 0.68
MSRA-207ENST00000521686 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
MSRA-207ENST00000521686 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
MSRA-207ENST00000521686 ADRA2BP18089 450 aa18.25■□□□□ 0.51
MSRA-207ENST00000521686 PIAS4Q8N2W9 510 aaPredicted RBP18.09■□□□□ 0.49
MSRA-207ENST00000521686 MSH5O43196 834 aa17.87■□□□□ 0.45
MSRA-207ENST00000521686 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
MSRA-207ENST00000521686 MAPK8IP2Q13387 824 aaPredicted RBP16.71■□□□□ 0.27
MSRA-207ENST00000521686 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
MSRA-207ENST00000521686 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
MSRA-207ENST00000521686 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
MSRA-207ENST00000521686 CNKSR2Q8WXI2 1034 aa16.06■□□□□ 0.16
MSRA-207ENST00000521686 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
MSRA-207ENST00000521686 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
MSRA-207ENST00000521686 NISCHQ9Y2I1 1504 aa15.83■□□□□ 0.12
MSRA-207ENST00000521686 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
MSRA-207ENST00000521686 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
MSRA-207ENST00000521686 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
MSRA-207ENST00000521686 KCNA4P22459 653 aa15.67■□□□□ 0.1
MSRA-207ENST00000521686 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
MSRA-207ENST00000521686 ABCC9O60706 1549 aa15.33■□□□□ 0.04
MSRA-207ENST00000521686 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
MSRA-207ENST00000521686 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
MSRA-207ENST00000521686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.02
MSRA-207ENST00000521686 C1QBPQ07021 282 aaKnown RBP15.06■□□□□ 0
MSRA-207ENST00000521686 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
MSRA-207ENST00000521686 U3KPZ7 1027 aaPredicted RBP14.95□□□□□ -0.02
MSRA-207ENST00000521686 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
MSRA-207ENST00000521686 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
MSRA-207ENST00000521686 CAPN15O75808 1086 aa14.59□□□□□ -0.07
MSRA-207ENST00000521686 MYCNP04198 464 aaPredicted RBP14.47□□□□□ -0.09
MSRA-207ENST00000521686 DSG3P32926 999 aa14.47□□□□□ -0.09
MSRA-207ENST00000521686 ZBTB22O15209 634 aa14.46□□□□□ -0.09
MSRA-207ENST00000521686 FOXD4L1Q9NU39 408 aa14.46□□□□□ -0.09
MSRA-207ENST00000521686 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
MSRA-207ENST00000521686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
MSRA-207ENST00000521686 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
MSRA-207ENST00000521686 HNRNPUL2Q1KMD3 747 aaKnown RBP14.44□□□□□ -0.1
MSRA-207ENST00000521686 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
MSRA-207ENST00000521686 DNAJC5Q9H3Z4 198 aa14.4□□□□□ -0.1
MSRA-207ENST00000521686 APLP2Q06481 763 aa14.36□□□□□ -0.11
MSRA-207ENST00000521686 ABCB7O75027 752 aa14.34□□□□□ -0.11
MSRA-207ENST00000521686 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.12
MSRA-207ENST00000521686 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
MSRA-207ENST00000521686 PABPN1Q86U42 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
MSRA-207ENST00000521686 RB1CC1Q8TDY2 1594 aa14.14□□□□□ -0.15
MSRA-207ENST00000521686 POLA2Q14181 598 aa14.1□□□□□ -0.15
MSRA-207ENST00000521686 CSRNP3Q8WYN3 585 aa13.96□□□□□ -0.17
MSRA-207ENST00000521686 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
MSRA-207ENST00000521686 ATXN8OSP0DMR3 200 aa13.92□□□□□ -0.18
MSRA-207ENST00000521686 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
MSRA-207ENST00000521686 NACADO15069 1562 aa13.87□□□□□ -0.19
MSRA-207ENST00000521686 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
MSRA-207ENST00000521686 UNC13AQ9UPW8 1703 aa13.82□□□□□ -0.2
MSRA-207ENST00000521686 CC2D2AQ9P2K1 1620 aa13.76□□□□□ -0.21
MSRA-207ENST00000521686 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
MSRA-207ENST00000521686 DCAF8L2P0C7V8 631 aa13.68□□□□□ -0.22
MSRA-207ENST00000521686 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
MSRA-207ENST00000521686 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
MSRA-207ENST00000521686 MKRN4PQ13434 485 aaPredicted RBP13.58□□□□□ -0.24
MSRA-207ENST00000521686 EIF4G1Q04637 1599 aaKnown RBP13.55□□□□□ -0.24
MSRA-207ENST00000521686 FBLN2P98095 1184 aa13.51□□□□□ -0.25
MSRA-207ENST00000521686 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
MSRA-207ENST00000521686 POTEHQ6S545 545 aa13.46□□□□□ -0.25
MSRA-207ENST00000521686 CUX2O14529 1486 aa13.45□□□□□ -0.26
MSRA-207ENST00000521686 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
MSRA-207ENST00000521686 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
MSRA-207ENST00000521686 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
MSRA-207ENST00000521686 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
MSRA-207ENST00000521686 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
MSRA-207ENST00000521686 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
MSRA-207ENST00000521686 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
MSRA-207ENST00000521686 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
MSRA-207ENST00000521686 PITPNM1O00562 1244 aa13.27□□□□□ -0.29
MSRA-207ENST00000521686 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
MSRA-207ENST00000521686 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
MSRA-207ENST00000521686 ERCC6Q03468 1493 aa13.21□□□□□ -0.3
MSRA-207ENST00000521686 SCRIBQ14160 1630 aa13.2□□□□□ -0.3
MSRA-207ENST00000521686 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
MSRA-207ENST00000521686 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
MSRA-207ENST00000521686 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
MSRA-207ENST00000521686 SPDYE1Q8NFV5 336 aaPredicted RBP13.05□□□□□ -0.32
MSRA-207ENST00000521686 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
MSRA-207ENST00000521686 DCAF1Q9Y4B6 1507 aa12.98□□□□□ -0.33
MSRA-207ENST00000521686 NESP48681 1621 aa12.98□□□□□ -0.33
MSRA-207ENST00000521686 ZCCHC6Q5VYS8 1495 aaKnown RBP12.97□□□□□ -0.33
MSRA-207ENST00000521686 THOC2Q8NI27 1593 aaKnown RBP12.94□□□□□ -0.34
MSRA-207ENST00000521686 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
MSRA-207ENST00000521686 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
MSRA-207ENST00000521686 NCAPD3P42695 1498 aa12.87□□□□□ -0.35
MSRA-207ENST00000521686 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
MSRA-207ENST00000521686 HAX1O00165 279 aa12.81□□□□□ -0.36
MSRA-207ENST00000521686 SMARCA2P51531 1590 aa12.8□□□□□ -0.36
MSRA-207ENST00000521686 EVX2Q03828 476 aa12.78□□□□□ -0.36
MSRA-207ENST00000521686 ATAD2BQ9ULI0 1458 aa12.74□□□□□ -0.37
MSRA-207ENST00000521686 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms