RNA–Protein interactions for RNA: ENST00000517808.1

PCNX2-219, Transcript of pecanex 2, humanhuman

TSL 5

Gene PCNX2, Length 307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-219ENST00000517808 CHIC1Q5VXU3 224 aa14.73□□□□□ -0.05
PCNX2-219ENST00000517808 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
PCNX2-219ENST00000517808 NISCHQ9Y2I1 1504 aa13.54□□□□□ -0.24
PCNX2-219ENST00000517808 PHF23Q9BUL5 403 aaPredicted RBP13.02□□□□□ -0.33
PCNX2-219ENST00000517808 PLPPR3Q6T4P5 718 aa12.24□□□□□ -0.45
PCNX2-219ENST00000517808 SENP3Q9H4L4 574 aaPredicted RBP12.16□□□□□ -0.46
PCNX2-219ENST00000517808 CCDC180Q9P1Z9 1646 aa11.98□□□□□ -0.49
PCNX2-219ENST00000517808 ABCC9O60706 1549 aa11.96□□□□□ -0.49
PCNX2-219ENST00000517808 ADRA2BP18089 450 aa11.42□□□□□ -0.58
PCNX2-219ENST00000517808 DNAJC5BQ9UF47 199 aa11.39□□□□□ -0.59
PCNX2-219ENST00000517808 NACADO15069 1562 aa11.36□□□□□ -0.59
PCNX2-219ENST00000517808 RB1CC1Q8TDY2 1594 aa11.36□□□□□ -0.59
PCNX2-219ENST00000517808 KCNA4P22459 653 aa11.33□□□□□ -0.6
PCNX2-219ENST00000517808 DCAF8L2P0C7V8 631 aa11.31□□□□□ -0.6
PCNX2-219ENST00000517808 EHMT2Q96KQ7 1210 aa11.31□□□□□ -0.6
PCNX2-219ENST00000517808 MYO15BQ96JP2 1530 aa11.3□□□□□ -0.6
PCNX2-219ENST00000517808 PPP6R1Q9UPN7 881 aa11.26□□□□□ -0.61
PCNX2-219ENST00000517808 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
PCNX2-219ENST00000517808 ZCCHC6Q5VYS8 1495 aaKnown RBP11.21□□□□□ -0.61
PCNX2-219ENST00000517808 BICRAQ9NZM4 1560 aa11.2□□□□□ -0.62
PCNX2-219ENST00000517808 UNC13AQ9UPW8 1703 aa11.19□□□□□ -0.62
PCNX2-219ENST00000517808 FOXD1Q16676 465 aa11.19□□□□□ -0.62
PCNX2-219ENST00000517808 DCAF1Q9Y4B6 1507 aa11.19□□□□□ -0.62
PCNX2-219ENST00000517808 SCRIBQ14160 1630 aa10.93□□□□□ -0.66
PCNX2-219ENST00000517808 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
PCNX2-219ENST00000517808 SLC4A1APQ9BWU0 796 aaKnown RBP10.91□□□□□ -0.66
PCNX2-219ENST00000517808 SHROOM4Q9ULL8 1493 aa10.88□□□□□ -0.67
PCNX2-219ENST00000517808 PPP4R3CPQ6ZMV5 832 aa10.86□□□□□ -0.67
PCNX2-219ENST00000517808 CC2D2AQ9P2K1 1620 aa10.81□□□□□ -0.68
PCNX2-219ENST00000517808 EIF4G1Q04637 1599 aaKnown RBP10.81□□□□□ -0.68
PCNX2-219ENST00000517808 NCBP3Q53F19 620 aaKnown RBP10.77□□□□□ -0.69
PCNX2-219ENST00000517808 CECR2Q9BXF3 1484 aa10.75□□□□□ -0.69
PCNX2-219ENST00000517808 PIAS4Q8N2W9 510 aaPredicted RBP10.72□□□□□ -0.69
PCNX2-219ENST00000517808 NPM3O75607 178 aaKnown RBP10.6□□□□□ -0.71
PCNX2-219ENST00000517808 NCAPD3P42695 1498 aa10.58□□□□□ -0.72
PCNX2-219ENST00000517808 ATAD2BQ9ULI0 1458 aa10.54□□□□□ -0.72
PCNX2-219ENST00000517808 SMARCA4P51532 1647 aa10.48□□□□□ -0.73
PCNX2-219ENST00000517808 MROH2BQ7Z745 1585 aa10.47□□□□□ -0.73
PCNX2-219ENST00000517808 ZBTB22O15209 634 aa10.44□□□□□ -0.74
PCNX2-219ENST00000517808 PEG3Q9GZU2 1588 aa10.43□□□□□ -0.74
PCNX2-219ENST00000517808 CNKSR2Q8WXI2 1034 aa10.43□□□□□ -0.74
PCNX2-219ENST00000517808 BAZ1AQ9NRL2 1556 aaPredicted RBP10.41□□□□□ -0.74
PCNX2-219ENST00000517808 SMARCA2P51531 1590 aa10.4□□□□□ -0.74
PCNX2-219ENST00000517808 HMGXB3Q12766 1538 aa10.4□□□□□ -0.74
PCNX2-219ENST00000517808 NESP48681 1621 aa10.37□□□□□ -0.75
PCNX2-219ENST00000517808 SCAF1Q9H7N4 1312 aaKnown RBP10.34□□□□□ -0.75
PCNX2-219ENST00000517808 BAZ1BQ9UIG0 1483 aaKnown RBP10.33□□□□□ -0.76
PCNX2-219ENST00000517808 RSF1Q96T23 1441 aaPredicted RBP10.31□□□□□ -0.76
PCNX2-219ENST00000517808 WIZO95785 1651 aa10.3□□□□□ -0.76
PCNX2-219ENST00000517808 DNAJC5Q9H3Z4 198 aa10.28□□□□□ -0.76
PCNX2-219ENST00000517808 FOXD4L1Q9NU39 408 aa10.25□□□□□ -0.77
PCNX2-219ENST00000517808 CADPSQ9ULU8 1353 aa10.24□□□□□ -0.77
PCNX2-219ENST00000517808 CUX2O14529 1486 aa10.23□□□□□ -0.77
PCNX2-219ENST00000517808 LAMC3Q9Y6N6 1575 aa10.2□□□□□ -0.78
PCNX2-219ENST00000517808 ERCC6Q03468 1493 aa10.19□□□□□ -0.78
PCNX2-219ENST00000517808 THOC2Q8NI27 1593 aaKnown RBP10.17□□□□□ -0.78
PCNX2-219ENST00000517808 CFTRP13569 1480 aa10.15□□□□□ -0.78
PCNX2-219ENST00000517808 PDS5BQ9NTI5 1447 aa10.15□□□□□ -0.79
PCNX2-219ENST00000517808 SLC24A1O60721 1099 aa10.14□□□□□ -0.79
PCNX2-219ENST00000517808 KIF21AQ7Z4S6 1674 aa10.14□□□□□ -0.79
PCNX2-219ENST00000517808 TOP2AP11388 1531 aaKnown RBP10.12□□□□□ -0.79
PCNX2-219ENST00000517808 CCDC88BA6NC98 1476 aa10.1□□□□□ -0.79
PCNX2-219ENST00000517808 AMER1Q5JTC6 1135 aaPredicted RBP10.09□□□□□ -0.79
PCNX2-219ENST00000517808 MSH5O43196 834 aa10.08□□□□□ -0.8
PCNX2-219ENST00000517808 RTN4Q9NQC3 1192 aaKnown RBP10.07□□□□□ -0.8
PCNX2-219ENST00000517808 RNF216Q9NWF9 866 aaPredicted RBP10.07□□□□□ -0.8
PCNX2-219ENST00000517808 FANCD2Q9BXW9 1451 aa10.06□□□□□ -0.8
PCNX2-219ENST00000517808 HRCP23327 699 aa10.06□□□□□ -0.8
PCNX2-219ENST00000517808 MRC2Q9UBG0 1479 aa10.05□□□□□ -0.8
PCNX2-219ENST00000517808 WDR62O43379 1518 aa10.05□□□□□ -0.8
PCNX2-219ENST00000517808 MAPK8IP2Q13387 824 aaPredicted RBP10.04□□□□□ -0.8
PCNX2-219ENST00000517808 URB2Q14146 1524 aaKnown RBP10.03□□□□□ -0.8
PCNX2-219ENST00000517808 CEP164Q9UPV0 1460 aa9.99□□□□□ -0.81
PCNX2-219ENST00000517808 PELP1Q8IZL8 1130 aaKnown RBP9.93□□□□□ -0.82
PCNX2-219ENST00000517808 TOPBP1Q92547 1522 aa9.91□□□□□ -0.82
PCNX2-219ENST00000517808 ZNF608Q9ULD9 1512 aaPredicted RBP9.9□□□□□ -0.82
PCNX2-219ENST00000517808 PRDM2Q13029 1718 aa9.9□□□□□ -0.83
PCNX2-219ENST00000517808 SLC4A2P04920 1241 aa9.86□□□□□ -0.83
PCNX2-219ENST00000517808 HOXD11P31277 338 aaPredicted RBP9.86□□□□□ -0.83
PCNX2-219ENST00000517808 ATXN8OSP0DMR3 200 aa9.85□□□□□ -0.83
PCNX2-219ENST00000517808 OSCARQ8IYS5 282 aa9.85□□□□□ -0.83
PCNX2-219ENST00000517808 SUPT5HO00267 1087 aaKnown RBP9.84□□□□□ -0.83
PCNX2-219ENST00000517808 IFT140Q96RY7 1462 aa9.84□□□□□ -0.83
PCNX2-219ENST00000517808 TARBP1Q13395 1621 aaKnown RBP9.83□□□□□ -0.84
PCNX2-219ENST00000517808 ABCC8Q09428 1581 aa9.83□□□□□ -0.84
PCNX2-219ENST00000517808 AQRO60306 1485 aaKnown RBP eCLIP9.82□□□□□ -0.84
PCNX2-219ENST00000517808 DNMBPQ6XZF7 1577 aa9.82□□□□□ -0.84
PCNX2-219ENST00000517808 POLA1P09884 1462 aaPredicted RBP9.81□□□□□ -0.84
PCNX2-219ENST00000517808 RAD54L2Q9Y4B4 1467 aa9.81□□□□□ -0.84
PCNX2-219ENST00000517808 FKBP8Q14318 412 aa9.81□□□□□ -0.84
PCNX2-219ENST00000517808 DMRT2Q9Y5R5 561 aa9.81□□□□□ -0.84
PCNX2-219ENST00000517808 MYCNP04198 464 aaPredicted RBP9.8□□□□□ -0.84
PCNX2-219ENST00000517808 CUX1P39880 1505 aa9.8□□□□□ -0.84
PCNX2-219ENST00000517808 SOGA1O94964 1423 aa9.78□□□□□ -0.84
PCNX2-219ENST00000517808 TDRD9Q8NDG6 1382 aaKnown RBP9.77□□□□□ -0.84
PCNX2-219ENST00000517808 FGD5Q6ZNL6 1462 aa9.74□□□□□ -0.85
PCNX2-219ENST00000517808 EIF4G3O43432 1585 aaKnown RBP9.72□□□□□ -0.85
PCNX2-219ENST00000517808 TRIM41Q8WV44 630 aa9.7□□□□□ -0.86
PCNX2-219ENST00000517808 PCGF6Q9BYE7 350 aa9.69□□□□□ -0.86
PCNX2-219ENST00000517808 ZEB1P37275 1124 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms