RNA–Protein interactions for RNA: ENST00000513457.5

LDB2-215, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 530 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-215ENST00000513457 AEBP2Q6ZN18 517 aaPredicted RBP21.58■■□□□ 1.05
LDB2-215ENST00000513457 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
LDB2-215ENST00000513457 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
LDB2-215ENST00000513457 PHF23Q9BUL5 403 aaPredicted RBP18.12■□□□□ 0.49
LDB2-215ENST00000513457 FOXD1Q16676 465 aa17.21■□□□□ 0.35
LDB2-215ENST00000513457 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
LDB2-215ENST00000513457 MSH5O43196 834 aa16.14■□□□□ 0.17
LDB2-215ENST00000513457 PIAS4Q8N2W9 510 aaPredicted RBP16.02■□□□□ 0.16
LDB2-215ENST00000513457 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
LDB2-215ENST00000513457 PPP6R1Q9UPN7 881 aa15.9■□□□□ 0.14
LDB2-215ENST00000513457 ADRA2BP18089 450 aa15.84■□□□□ 0.13
LDB2-215ENST00000513457 MAPK8IP2Q13387 824 aaPredicted RBP14.65□□□□□ -0.06
LDB2-215ENST00000513457 NISCHQ9Y2I1 1504 aa14.53□□□□□ -0.08
LDB2-215ENST00000513457 DMRT2Q9Y5R5 561 aa14.53□□□□□ -0.08
LDB2-215ENST00000513457 SCAF1Q9H7N4 1312 aaKnown RBP14.36□□□□□ -0.11
LDB2-215ENST00000513457 CACNB1Q02641 598 aaPredicted RBP14.09□□□□□ -0.15
LDB2-215ENST00000513457 DCAF8L1A6NGE4 600 aa14.03□□□□□ -0.16
LDB2-215ENST00000513457 PPP4R3CPQ6ZMV5 832 aa13.97□□□□□ -0.17
LDB2-215ENST00000513457 HOXD11P31277 338 aaPredicted RBP13.86□□□□□ -0.19
LDB2-215ENST00000513457 RNF39Q9H2S5 420 aa13.78□□□□□ -0.2
LDB2-215ENST00000513457 CNKSR2Q8WXI2 1034 aa13.73□□□□□ -0.21
LDB2-215ENST00000513457 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
LDB2-215ENST00000513457 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
LDB2-215ENST00000513457 DNAJC5BQ9UF47 199 aa13.34□□□□□ -0.27
LDB2-215ENST00000513457 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
LDB2-215ENST00000513457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.25□□□□□ -0.29
LDB2-215ENST00000513457 CCDC180Q9P1Z9 1646 aa13.21□□□□□ -0.3
LDB2-215ENST00000513457 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
LDB2-215ENST00000513457 ABCC9O60706 1549 aa13.04□□□□□ -0.32
LDB2-215ENST00000513457 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
LDB2-215ENST00000513457 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
LDB2-215ENST00000513457 CAPN15O75808 1086 aa12.86□□□□□ -0.35
LDB2-215ENST00000513457 DSG3P32926 999 aa12.82□□□□□ -0.36
LDB2-215ENST00000513457 POTEHQ6S545 545 aa12.73□□□□□ -0.37
LDB2-215ENST00000513457 KCNA4P22459 653 aa12.68□□□□□ -0.38
LDB2-215ENST00000513457 SLC4A2P04920 1241 aa12.66□□□□□ -0.38
LDB2-215ENST00000513457 TRHP20396 242 aaPredicted RBP12.59□□□□□ -0.39
LDB2-215ENST00000513457 ABCB7O75027 752 aa12.58□□□□□ -0.4
LDB2-215ENST00000513457 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.4
LDB2-215ENST00000513457 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
LDB2-215ENST00000513457 APLP2Q06481 763 aa12.44□□□□□ -0.42
LDB2-215ENST00000513457 NACADO15069 1562 aa12.42□□□□□ -0.42
LDB2-215ENST00000513457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.37□□□□□ -0.43
LDB2-215ENST00000513457 HNRNPUL2Q1KMD3 747 aaKnown RBP12.37□□□□□ -0.43
LDB2-215ENST00000513457 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
LDB2-215ENST00000513457 MYO15BQ96JP2 1530 aa12.27□□□□□ -0.44
LDB2-215ENST00000513457 UNC13AQ9UPW8 1703 aa12.23□□□□□ -0.45
LDB2-215ENST00000513457 RBM42Q9BTD8 480 aaKnown RBP12.18□□□□□ -0.46
LDB2-215ENST00000513457 POLA2Q14181 598 aa12.16□□□□□ -0.46
LDB2-215ENST00000513457 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
LDB2-215ENST00000513457 BICRAQ9NZM4 1560 aa12.1□□□□□ -0.47
LDB2-215ENST00000513457 SHROOM4Q9ULL8 1493 aa12.1□□□□□ -0.47
LDB2-215ENST00000513457 CHRDL2Q6WN34 429 aa12.09□□□□□ -0.47
LDB2-215ENST00000513457 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
LDB2-215ENST00000513457 ZCCHC6Q5VYS8 1495 aaKnown RBP12.08□□□□□ -0.47
LDB2-215ENST00000513457 DCAF8L2P0C7V8 631 aa12.06□□□□□ -0.48
LDB2-215ENST00000513457 PABPN1Q86U42 306 aaKnown RBP eCLIP12.02□□□□□ -0.49
LDB2-215ENST00000513457 ATF5Q9Y2D1 282 aaPredicted RBP11.98□□□□□ -0.49
LDB2-215ENST00000513457 SCRIBQ14160 1630 aa11.91□□□□□ -0.5
LDB2-215ENST00000513457 SLC4A1APQ9BWU0 796 aaKnown RBP11.88□□□□□ -0.51
LDB2-215ENST00000513457 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
LDB2-215ENST00000513457 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
LDB2-215ENST00000513457 CC2D2AQ9P2K1 1620 aa11.85□□□□□ -0.51
LDB2-215ENST00000513457 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
LDB2-215ENST00000513457 OSCARQ8IYS5 282 aa11.83□□□□□ -0.52
LDB2-215ENST00000513457 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
LDB2-215ENST00000513457 CECR2Q9BXF3 1484 aa11.8□□□□□ -0.52
LDB2-215ENST00000513457 SP7Q8TDD2 431 aaPredicted RBP11.79□□□□□ -0.52
LDB2-215ENST00000513457 REM2Q8IYK8 340 aaPredicted RBP11.78□□□□□ -0.52
LDB2-215ENST00000513457 PIP4P2Q8N4L2 257 aa11.76□□□□□ -0.53
LDB2-215ENST00000513457 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
LDB2-215ENST00000513457 ZBTB22O15209 634 aa11.68□□□□□ -0.54
LDB2-215ENST00000513457 HAX1O00165 279 aa11.62□□□□□ -0.55
LDB2-215ENST00000513457 FXR2P51116 673 aaKnown RBP eCLIP11.6□□□□□ -0.55
LDB2-215ENST00000513457 EVX2Q03828 476 aa11.51□□□□□ -0.57
LDB2-215ENST00000513457 SPDYE2BA6NHP3 402 aa11.45□□□□□ -0.58
LDB2-215ENST00000513457 SPDYE6P0CI01 402 aa11.45□□□□□ -0.58
LDB2-215ENST00000513457 ATXN8OSP0DMR3 200 aa11.45□□□□□ -0.58
LDB2-215ENST00000513457 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
LDB2-215ENST00000513457 FBLN2P98095 1184 aa11.43□□□□□ -0.58
LDB2-215ENST00000513457 HMGXB3Q12766 1538 aa11.41□□□□□ -0.58
LDB2-215ENST00000513457 CLEC11AQ9Y240 323 aa11.41□□□□□ -0.58
LDB2-215ENST00000513457 NCAPD3P42695 1498 aa11.4□□□□□ -0.58
LDB2-215ENST00000513457 SMARCA2P51531 1590 aa11.4□□□□□ -0.58
LDB2-215ENST00000513457 SMARCA4P51532 1647 aa11.39□□□□□ -0.59
LDB2-215ENST00000513457 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
LDB2-215ENST00000513457 PRKAR2AP13861 404 aaKnown RBP11.38□□□□□ -0.59
LDB2-215ENST00000513457 CUX2O14529 1486 aa11.38□□□□□ -0.59
LDB2-215ENST00000513457 ATAD2BQ9ULI0 1458 aa11.35□□□□□ -0.59
LDB2-215ENST00000513457 BAZ1AQ9NRL2 1556 aaPredicted RBP11.34□□□□□ -0.59
LDB2-215ENST00000513457 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
LDB2-215ENST00000513457 ERCC6Q03468 1493 aa11.32□□□□□ -0.6
LDB2-215ENST00000513457 PEG3Q9GZU2 1588 aa11.32□□□□□ -0.6
LDB2-215ENST00000513457 ZNF692Q9BU19 519 aaPredicted RBP11.3□□□□□ -0.6
LDB2-215ENST00000513457 BAZ1BQ9UIG0 1483 aaKnown RBP11.28□□□□□ -0.6
LDB2-215ENST00000513457 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
LDB2-215ENST00000513457 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
LDB2-215ENST00000513457 CHADLQ6NUI6 762 aa11.25□□□□□ -0.61
LDB2-215ENST00000513457 DNAJC5Q9H3Z4 198 aa11.24□□□□□ -0.61
LDB2-215ENST00000513457 LAMC3Q9Y6N6 1575 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms