RNA–Protein interactions for RNA: ENST00000512028.5

SPDL1-211, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 4

Gene SPDL1, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-211ENST00000512028 AEBP2Q6ZN18 517 aaPredicted RBP31.42■■■□□ 2.62
SPDL1-211ENST00000512028 CHIC1Q5VXU3 224 aa30.16■■■□□ 2.42
SPDL1-211ENST00000512028 SENP3Q9H4L4 574 aaPredicted RBP26.83■■□□□ 1.89
SPDL1-211ENST00000512028 PHF23Q9BUL5 403 aaPredicted RBP26.49■■□□□ 1.83
SPDL1-211ENST00000512028 FOXD1Q16676 465 aa24.93■■□□□ 1.58
SPDL1-211ENST00000512028 PLPPR3Q6T4P5 718 aa24.25■■□□□ 1.47
SPDL1-211ENST00000512028 PPP6R1Q9UPN7 881 aa23.49■■□□□ 1.35
SPDL1-211ENST00000512028 ADRA2BP18089 450 aa23.43■■□□□ 1.34
SPDL1-211ENST00000512028 PIAS4Q8N2W9 510 aaPredicted RBP23.36■■□□□ 1.33
SPDL1-211ENST00000512028 MSH5O43196 834 aa23.29■■□□□ 1.32
SPDL1-211ENST00000512028 POTEDQ86YR6 584 aa22.2■■□□□ 1.14
SPDL1-211ENST00000512028 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
SPDL1-211ENST00000512028 MAPK8IP2Q13387 824 aaPredicted RBP21.43■■□□□ 1.02
SPDL1-211ENST00000512028 DMRT2Q9Y5R5 561 aa21.31■■□□□ 1
SPDL1-211ENST00000512028 PPP4R3CPQ6ZMV5 832 aa21.26■□□□□ 0.99
SPDL1-211ENST00000512028 CNKSR2Q8WXI2 1034 aa20.83■□□□□ 0.93
SPDL1-211ENST00000512028 NISCHQ9Y2I1 1504 aa20.71■□□□□ 0.91
SPDL1-211ENST00000512028 HOXD11P31277 338 aaPredicted RBP20.65■□□□□ 0.9
SPDL1-211ENST00000512028 NCBP3Q53F19 620 aaKnown RBP20.58■□□□□ 0.89
SPDL1-211ENST00000512028 RNF216Q9NWF9 866 aaPredicted RBP20.58■□□□□ 0.89
SPDL1-211ENST00000512028 DCAF8L1A6NGE4 600 aa20.37■□□□□ 0.85
SPDL1-211ENST00000512028 NPM3O75607 178 aaKnown RBP20.22■□□□□ 0.83
SPDL1-211ENST00000512028 KCNA4P22459 653 aa20.05■□□□□ 0.8
SPDL1-211ENST00000512028 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
SPDL1-211ENST00000512028 RNF39Q9H2S5 420 aa19.86■□□□□ 0.77
SPDL1-211ENST00000512028 CACNB1Q02641 598 aaPredicted RBP19.77■□□□□ 0.76
SPDL1-211ENST00000512028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.65■□□□□ 0.74
SPDL1-211ENST00000512028 C1QBPQ07021 282 aaKnown RBP19.62■□□□□ 0.73
SPDL1-211ENST00000512028 ABCC9O60706 1549 aa19.42■□□□□ 0.7
SPDL1-211ENST00000512028 U3KPZ7 1027 aaPredicted RBP19.26■□□□□ 0.67
SPDL1-211ENST00000512028 SLC4A2P04920 1241 aa19.23■□□□□ 0.67
SPDL1-211ENST00000512028 SLC4A1APQ9BWU0 796 aaKnown RBP19.01■□□□□ 0.63
SPDL1-211ENST00000512028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
SPDL1-211ENST00000512028 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
SPDL1-211ENST00000512028 SPINK5Q9NQ38 1064 aaPredicted RBP18.87■□□□□ 0.61
SPDL1-211ENST00000512028 CAPN15O75808 1086 aa18.85■□□□□ 0.61
SPDL1-211ENST00000512028 APLP2Q06481 763 aa18.85■□□□□ 0.61
SPDL1-211ENST00000512028 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
SPDL1-211ENST00000512028 SAMD1Q6SPF0 538 aaPredicted RBP18.76■□□□□ 0.59
SPDL1-211ENST00000512028 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
SPDL1-211ENST00000512028 DSG3P32926 999 aa18.69■□□□□ 0.58
SPDL1-211ENST00000512028 FOXD4L1Q9NU39 408 aa18.67■□□□□ 0.58
SPDL1-211ENST00000512028 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.57
SPDL1-211ENST00000512028 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
SPDL1-211ENST00000512028 ZBTB22O15209 634 aa18.42■□□□□ 0.54
SPDL1-211ENST00000512028 ABCB7O75027 752 aa18.4■□□□□ 0.54
SPDL1-211ENST00000512028 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
SPDL1-211ENST00000512028 ATF5Q9Y2D1 282 aaPredicted RBP18.21■□□□□ 0.51
SPDL1-211ENST00000512028 POLA2Q14181 598 aa18.18■□□□□ 0.5
SPDL1-211ENST00000512028 ATXN8OSP0DMR3 200 aa18.13■□□□□ 0.49
SPDL1-211ENST00000512028 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
SPDL1-211ENST00000512028 NACADO15069 1562 aa17.94■□□□□ 0.46
SPDL1-211ENST00000512028 ZBTB12Q9Y330 459 aaPredicted RBP17.9■□□□□ 0.46
SPDL1-211ENST00000512028 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
SPDL1-211ENST00000512028 RBM42Q9BTD8 480 aaKnown RBP17.87■□□□□ 0.45
SPDL1-211ENST00000512028 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
SPDL1-211ENST00000512028 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
SPDL1-211ENST00000512028 EHMT2Q96KQ7 1210 aa17.73■□□□□ 0.43
SPDL1-211ENST00000512028 BICRAQ9NZM4 1560 aa17.73■□□□□ 0.43
SPDL1-211ENST00000512028 DNAJC5Q9H3Z4 198 aa17.64■□□□□ 0.41
SPDL1-211ENST00000512028 FBLN2P98095 1184 aa17.56■□□□□ 0.4
SPDL1-211ENST00000512028 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
SPDL1-211ENST00000512028 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
SPDL1-211ENST00000512028 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
SPDL1-211ENST00000512028 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
SPDL1-211ENST00000512028 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
SPDL1-211ENST00000512028 POTEHQ6S545 545 aa17.46■□□□□ 0.39
SPDL1-211ENST00000512028 MKRN4PQ13434 485 aaPredicted RBP17.4■□□□□ 0.38
SPDL1-211ENST00000512028 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
SPDL1-211ENST00000512028 SPDYE2BA6NHP3 402 aa17.35■□□□□ 0.37
SPDL1-211ENST00000512028 SPDYE6P0CI01 402 aa17.35■□□□□ 0.37
SPDL1-211ENST00000512028 SPDYE2Q495Y8 402 aa17.35■□□□□ 0.37
SPDL1-211ENST00000512028 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.37
SPDL1-211ENST00000512028 CHRDL2Q6WN34 429 aa17.32■□□□□ 0.36
SPDL1-211ENST00000512028 REM2Q8IYK8 340 aaPredicted RBP17.31■□□□□ 0.36
SPDL1-211ENST00000512028 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
SPDL1-211ENST00000512028 SCRIBQ14160 1630 aa17.14■□□□□ 0.33
SPDL1-211ENST00000512028 SSUH2Q9Y2M2 353 aa17.13■□□□□ 0.33
SPDL1-211ENST00000512028 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
SPDL1-211ENST00000512028 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
SPDL1-211ENST00000512028 ZCCHC6Q5VYS8 1495 aaKnown RBP17.02■□□□□ 0.32
SPDL1-211ENST00000512028 SPDYE1Q8NFV5 336 aaPredicted RBP16.97■□□□□ 0.31
SPDL1-211ENST00000512028 PIP4P2Q8N4L2 257 aa16.96■□□□□ 0.31
SPDL1-211ENST00000512028 CUX2O14529 1486 aa16.95■□□□□ 0.3
SPDL1-211ENST00000512028 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.3
SPDL1-211ENST00000512028 CLEC11AQ9Y240 323 aa16.89■□□□□ 0.29
SPDL1-211ENST00000512028 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
SPDL1-211ENST00000512028 SPDYE4A6NLX3 237 aa16.75■□□□□ 0.27
SPDL1-211ENST00000512028 PRR29P0C7W0 189 aa16.68■□□□□ 0.26
SPDL1-211ENST00000512028 PRKAR2AP13861 404 aaKnown RBP16.68■□□□□ 0.26
SPDL1-211ENST00000512028 TRIM41Q8WV44 630 aa16.64■□□□□ 0.25
SPDL1-211ENST00000512028 HAX1O00165 279 aa16.58■□□□□ 0.24
SPDL1-211ENST00000512028 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
SPDL1-211ENST00000512028 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
SPDL1-211ENST00000512028 NESP48681 1621 aa16.52■□□□□ 0.24
SPDL1-211ENST00000512028 CHADLQ6NUI6 762 aa16.51■□□□□ 0.23
SPDL1-211ENST00000512028 SP7Q8TDD2 431 aaPredicted RBP16.51■□□□□ 0.23
SPDL1-211ENST00000512028 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
SPDL1-211ENST00000512028 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
SPDL1-211ENST00000512028 PROM2Q8N271 834 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms