RNA–Protein interactions for RNA: ENST00000511139.1

FAM172A-209, Transcript of family with sequence similarity 172 member A, humanhuman

TSL 5

Gene FAM172A, Length 310 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM172A-209ENST00000511139 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
FAM172A-209ENST00000511139 CHIC1Q5VXU3 224 aa14.88□□□□□ -0.03
FAM172A-209ENST00000511139 PHF23Q9BUL5 403 aaPredicted RBP13.08□□□□□ -0.32
FAM172A-209ENST00000511139 SENP3Q9H4L4 574 aaPredicted RBP12.9□□□□□ -0.34
FAM172A-209ENST00000511139 PLPPR3Q6T4P5 718 aa12.15□□□□□ -0.46
FAM172A-209ENST00000511139 FOXD1Q16676 465 aa11.93□□□□□ -0.5
FAM172A-209ENST00000511139 ADRA2BP18089 450 aa11.55□□□□□ -0.56
FAM172A-209ENST00000511139 PPP6R1Q9UPN7 881 aa11.52□□□□□ -0.57
FAM172A-209ENST00000511139 PIAS4Q8N2W9 510 aaPredicted RBP11.33□□□□□ -0.6
FAM172A-209ENST00000511139 MSH5O43196 834 aa11□□□□□ -0.65
FAM172A-209ENST00000511139 NISCHQ9Y2I1 1504 aa10.81□□□□□ -0.68
FAM172A-209ENST00000511139 PPP4R3CPQ6ZMV5 832 aa10.71□□□□□ -0.69
FAM172A-209ENST00000511139 SCAF1Q9H7N4 1312 aaKnown RBP10.58□□□□□ -0.71
FAM172A-209ENST00000511139 KCNA4P22459 653 aa10.54□□□□□ -0.72
FAM172A-209ENST00000511139 NCBP3Q53F19 620 aaKnown RBP10.47□□□□□ -0.73
FAM172A-209ENST00000511139 MAPK8IP2Q13387 824 aaPredicted RBP10.45□□□□□ -0.74
FAM172A-209ENST00000511139 CNKSR2Q8WXI2 1034 aa10.39□□□□□ -0.75
FAM172A-209ENST00000511139 NPM3O75607 178 aaKnown RBP10.29□□□□□ -0.76
FAM172A-209ENST00000511139 DMRT2Q9Y5R5 561 aa10.28□□□□□ -0.76
FAM172A-209ENST00000511139 RNF216Q9NWF9 866 aaPredicted RBP10.15□□□□□ -0.78
FAM172A-209ENST00000511139 SLC4A1APQ9BWU0 796 aaKnown RBP10.08□□□□□ -0.8
FAM172A-209ENST00000511139 HOXD11P31277 338 aaPredicted RBP10.07□□□□□ -0.8
FAM172A-209ENST00000511139 DCAF8L1A6NGE4 600 aa9.95□□□□□ -0.82
FAM172A-209ENST00000511139 EHMT2Q96KQ7 1210 aa9.92□□□□□ -0.82
FAM172A-209ENST00000511139 POTEDQ86YR6 584 aa9.91□□□□□ -0.82
FAM172A-209ENST00000511139 DNAJC5BQ9UF47 199 aa9.88□□□□□ -0.83
FAM172A-209ENST00000511139 CCDC180Q9P1Z9 1646 aa9.76□□□□□ -0.85
FAM172A-209ENST00000511139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.69□□□□□ -0.86
FAM172A-209ENST00000511139 FOXD4L1Q9NU39 408 aa9.69□□□□□ -0.86
FAM172A-209ENST00000511139 ZBTB22O15209 634 aa9.68□□□□□ -0.86
FAM172A-209ENST00000511139 CSRNP3Q8WYN3 585 aa9.68□□□□□ -0.86
FAM172A-209ENST00000511139 SLC4A2P04920 1241 aa9.67□□□□□ -0.86
FAM172A-209ENST00000511139 ABCC9O60706 1549 aa9.55□□□□□ -0.88
FAM172A-209ENST00000511139 MYCNP04198 464 aaPredicted RBP9.53□□□□□ -0.88
FAM172A-209ENST00000511139 U3KPZ7 1027 aaPredicted RBP9.49□□□□□ -0.89
FAM172A-209ENST00000511139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.42□□□□□ -0.9
FAM172A-209ENST00000511139 HNRNPUL2Q1KMD3 747 aaKnown RBP9.42□□□□□ -0.9
FAM172A-209ENST00000511139 RNF39Q9H2S5 420 aa9.41□□□□□ -0.9
FAM172A-209ENST00000511139 SAMD1Q6SPF0 538 aaPredicted RBP9.38□□□□□ -0.91
FAM172A-209ENST00000511139 APLP2Q06481 763 aa9.32□□□□□ -0.92
FAM172A-209ENST00000511139 ATXN8OSP0DMR3 200 aa9.31□□□□□ -0.92
FAM172A-209ENST00000511139 C1QBPQ07021 282 aaKnown RBP9.31□□□□□ -0.92
FAM172A-209ENST00000511139 RB1CC1Q8TDY2 1594 aa9.29□□□□□ -0.92
FAM172A-209ENST00000511139 NACADO15069 1562 aa9.26□□□□□ -0.93
FAM172A-209ENST00000511139 ATF5Q9Y2D1 282 aaPredicted RBP9.24□□□□□ -0.93
FAM172A-209ENST00000511139 MYO15BQ96JP2 1530 aa9.24□□□□□ -0.93
FAM172A-209ENST00000511139 CAPN15O75808 1086 aa9.23□□□□□ -0.93
FAM172A-209ENST00000511139 SPINK5Q9NQ38 1064 aaPredicted RBP9.22□□□□□ -0.93
FAM172A-209ENST00000511139 TRHP20396 242 aaPredicted RBP9.19□□□□□ -0.94
FAM172A-209ENST00000511139 CACNB1Q02641 598 aaPredicted RBP9.17□□□□□ -0.94
FAM172A-209ENST00000511139 ZNF219Q9P2Y4 722 aaPredicted RBP9.17□□□□□ -0.94
FAM172A-209ENST00000511139 DCAF1Q9Y4B6 1507 aa9.07□□□□□ -0.96
FAM172A-209ENST00000511139 SHROOM4Q9ULL8 1493 aa9.07□□□□□ -0.96
FAM172A-209ENST00000511139 ABCB7O75027 752 aa9.05□□□□□ -0.96
FAM172A-209ENST00000511139 DCAF8L2P0C7V8 631 aa9.03□□□□□ -0.96
FAM172A-209ENST00000511139 POLA2Q14181 598 aa9.03□□□□□ -0.96
FAM172A-209ENST00000511139 DSG3P32926 999 aa8.99□□□□□ -0.97
FAM172A-209ENST00000511139 ZCCHC6Q5VYS8 1495 aaKnown RBP8.95□□□□□ -0.98
FAM172A-209ENST00000511139 FBLN2P98095 1184 aa8.91□□□□□ -0.98
FAM172A-209ENST00000511139 ZBTB12Q9Y330 459 aaPredicted RBP8.89□□□□□ -0.99
FAM172A-209ENST00000511139 UNC13AQ9UPW8 1703 aa8.88□□□□□ -0.99
FAM172A-209ENST00000511139 PABPN1Q86U42 306 aaKnown RBP eCLIP8.87□□□□□ -0.99
FAM172A-209ENST00000511139 BICRAQ9NZM4 1560 aa8.85□□□□□ -0.99
FAM172A-209ENST00000511139 MKRN4PQ13434 485 aaPredicted RBP8.83□□□□□ -1
FAM172A-209ENST00000511139 FKBP8Q14318 412 aa8.81□□□□□ -1
FAM172A-209ENST00000511139 OSCARQ8IYS5 282 aa8.74□□□□□ -1.01
FAM172A-209ENST00000511139 SPDYE4A6NLX3 237 aa8.71□□□□□ -1.02
FAM172A-209ENST00000511139 CECR2Q9BXF3 1484 aa8.7□□□□□ -1.02
FAM172A-209ENST00000511139 EIF4G1Q04637 1599 aaKnown RBP8.69□□□□□ -1.02
FAM172A-209ENST00000511139 SCRIBQ14160 1630 aa8.69□□□□□ -1.02
FAM172A-209ENST00000511139 CC2D2AQ9P2K1 1620 aa8.68□□□□□ -1.02
FAM172A-209ENST00000511139 SPDYE2BA6NHP3 402 aa8.64□□□□□ -1.03
FAM172A-209ENST00000511139 SPDYE6P0CI01 402 aa8.64□□□□□ -1.03
FAM172A-209ENST00000511139 SPDYE2Q495Y8 402 aa8.64□□□□□ -1.03
FAM172A-209ENST00000511139 ZNF692Q9BU19 519 aaPredicted RBP8.64□□□□□ -1.03
FAM172A-209ENST00000511139 RBM42Q9BTD8 480 aaKnown RBP8.6□□□□□ -1.03
FAM172A-209ENST00000511139 SSUH2Q9Y2M2 353 aa8.55□□□□□ -1.04
FAM172A-209ENST00000511139 NCAPD3P42695 1498 aa8.53□□□□□ -1.04
FAM172A-209ENST00000511139 SMARCA2P51531 1590 aa8.5□□□□□ -1.05
FAM172A-209ENST00000511139 PROM2Q8N271 834 aa8.5□□□□□ -1.05
FAM172A-209ENST00000511139 AKT1S1Q96B36 256 aa8.48□□□□□ -1.05
FAM172A-209ENST00000511139 FBXO3Q9UK99 471 aa8.47□□□□□ -1.05
FAM172A-209ENST00000511139 HMGXB3Q12766 1538 aa8.46□□□□□ -1.05
FAM172A-209ENST00000511139 BAZ1AQ9NRL2 1556 aaPredicted RBP8.44□□□□□ -1.06
FAM172A-209ENST00000511139 CUX2O14529 1486 aa8.44□□□□□ -1.06
FAM172A-209ENST00000511139 ATAD2BQ9ULI0 1458 aa8.43□□□□□ -1.06
FAM172A-209ENST00000511139 PEG3Q9GZU2 1588 aa8.41□□□□□ -1.06
FAM172A-209ENST00000511139 REM2Q8IYK8 340 aaPredicted RBP8.4□□□□□ -1.06
FAM172A-209ENST00000511139 STAG3Q9UJ98 1225 aa8.39□□□□□ -1.07
FAM172A-209ENST00000511139 CLEC11AQ9Y240 323 aa8.39□□□□□ -1.07
FAM172A-209ENST00000511139 SMARCA4P51532 1647 aa8.39□□□□□ -1.07
FAM172A-209ENST00000511139 SPDYE1Q8NFV5 336 aaPredicted RBP8.38□□□□□ -1.07
FAM172A-209ENST00000511139 DNAJC5Q9H3Z4 198 aa8.37□□□□□ -1.07
FAM172A-209ENST00000511139 ERCC6Q03468 1493 aa8.37□□□□□ -1.07
FAM172A-209ENST00000511139 BAZ1BQ9UIG0 1483 aaKnown RBP8.36□□□□□ -1.07
FAM172A-209ENST00000511139 VASPP50552 380 aaPredicted RBP8.35□□□□□ -1.07
FAM172A-209ENST00000511139 PDS5BQ9NTI5 1447 aa8.34□□□□□ -1.07
FAM172A-209ENST00000511139 LAMC3Q9Y6N6 1575 aa8.33□□□□□ -1.08
FAM172A-209ENST00000511139 PITPNM1O00562 1244 aa8.32□□□□□ -1.08
FAM172A-209ENST00000511139 PLCD3Q8N3E9 789 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms