RNA–Protein interactions for RNA: ENST00000510733.1

LRAT-207, Transcript of lecithin retinol acyltransferase, humanhuman

TSL 1 (best)

Gene LRAT, Length 5,002 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-207ENST00000510733 NISCHQ9Y2I1 1504 aa16.73■□□□□ 0.27
LRAT-207ENST00000510733 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
LRAT-207ENST00000510733 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
LRAT-207ENST00000510733 SHROOM4Q9ULL8 1493 aa15.36■□□□□ 0.05
LRAT-207ENST00000510733 FAM9AQ8IZU1 332 aaPredicted RBP15.29■□□□□ 0.04
LRAT-207ENST00000510733 APLP2Q06481 763 aa15.26■□□□□ 0.03
LRAT-207ENST00000510733 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
LRAT-207ENST00000510733 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
LRAT-207ENST00000510733 MYT1Q01538 1121 aa14.93□□□□□ -0.02
LRAT-207ENST00000510733 TRIM41Q8WV44 630 aa14.71□□□□□ -0.05
LRAT-207ENST00000510733 ZEB1P37275 1124 aaPredicted RBP14.69□□□□□ -0.06
LRAT-207ENST00000510733 UBTFP17480 764 aaKnown RBP14.55□□□□□ -0.08
LRAT-207ENST00000510733 ABCC9O60706 1549 aa14.54□□□□□ -0.08
LRAT-207ENST00000510733 ATP1B4Q9UN42 357 aaPredicted RBP14.53□□□□□ -0.08
LRAT-207ENST00000510733 CENPBP07199 599 aaPredicted RBP14.52□□□□□ -0.09
LRAT-207ENST00000510733 PCGF6Q9BYE7 350 aa14.52□□□□□ -0.09
LRAT-207ENST00000510733 CCER1Q8TC90 406 aaPredicted RBP14.51□□□□□ -0.09
LRAT-207ENST00000510733 TTBK1Q5TCY1 1321 aaPredicted RBP14.5□□□□□ -0.09
LRAT-207ENST00000510733 RANGAP1P46060 587 aaPredicted RBP14.48□□□□□ -0.09
LRAT-207ENST00000510733 ERICH6Q7L0X2 663 aa14.34□□□□□ -0.11
LRAT-207ENST00000510733 NEFLP07196 543 aa14.29□□□□□ -0.12
LRAT-207ENST00000510733 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
LRAT-207ENST00000510733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
LRAT-207ENST00000510733 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
LRAT-207ENST00000510733 TRIM26Q12899 539 aaPredicted RBP14.12□□□□□ -0.15
LRAT-207ENST00000510733 MYT1LQ9UL68 1186 aa14.12□□□□□ -0.15
LRAT-207ENST00000510733 CCDC180Q9P1Z9 1646 aa14.05□□□□□ -0.16
LRAT-207ENST00000510733 ITGAEP38570 1179 aa13.93□□□□□ -0.18
LRAT-207ENST00000510733 CHIC1Q5VXU3 224 aa13.91□□□□□ -0.18
LRAT-207ENST00000510733 YTHDC1Q96MU7 727 aaKnown RBP13.9□□□□□ -0.18
LRAT-207ENST00000510733 PPARGC1BQ86YN6 1023 aaKnown RBP13.89□□□□□ -0.19
LRAT-207ENST00000510733 DAXXQ9UER7 740 aaPredicted RBP13.87□□□□□ -0.19
LRAT-207ENST00000510733 ZCCHC6Q5VYS8 1495 aaKnown RBP13.86□□□□□ -0.19
LRAT-207ENST00000510733 POLR3GLQ9BT43 218 aa13.85□□□□□ -0.19
LRAT-207ENST00000510733 HRCP23327 699 aa13.78□□□□□ -0.2
LRAT-207ENST00000510733 LOC105371045A0A1W2PR82 267 aa13.74□□□□□ -0.21
LRAT-207ENST00000510733 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
LRAT-207ENST00000510733 FAM50AQ14320 339 aaKnown RBP13.7□□□□□ -0.22
LRAT-207ENST00000510733 SLC4A1APQ9BWU0 796 aaKnown RBP13.69□□□□□ -0.22
LRAT-207ENST00000510733 TRIM52Q96A61 297 aa13.67□□□□□ -0.22
LRAT-207ENST00000510733 RB1CC1Q8TDY2 1594 aa13.64□□□□□ -0.23
LRAT-207ENST00000510733 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
LRAT-207ENST00000510733 NACADO15069 1562 aa13.56□□□□□ -0.24
LRAT-207ENST00000510733 FBLN2P98095 1184 aa13.55□□□□□ -0.24
LRAT-207ENST00000510733 CLSPNQ9HAW4 1339 aa13.55□□□□□ -0.24
LRAT-207ENST00000510733 CDK11AQ9UQ88 783 aaPredicted RBP13.54□□□□□ -0.24
LRAT-207ENST00000510733 CNGB1Q14028 1251 aaPredicted RBP13.52□□□□□ -0.24
LRAT-207ENST00000510733 DIEXFQ68CQ4 756 aaKnown RBP13.52□□□□□ -0.25
LRAT-207ENST00000510733 ZNF316A6NFI3 1004 aaPredicted RBP13.5□□□□□ -0.25
LRAT-207ENST00000510733 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
LRAT-207ENST00000510733 ZBTB47Q9UFB7 747 aaPredicted RBP13.48□□□□□ -0.25
LRAT-207ENST00000510733 ANP32CO43423 234 aa13.47□□□□□ -0.25
LRAT-207ENST00000510733 NEFMP07197 916 aa13.46□□□□□ -0.25
LRAT-207ENST00000510733 NEUROD1Q13562 356 aa13.46□□□□□ -0.25
LRAT-207ENST00000510733 RTL5Q5HYW3 569 aaPredicted RBP13.46□□□□□ -0.26
LRAT-207ENST00000510733 ZNF326Q5BKZ1 582 aaKnown RBP13.4□□□□□ -0.26
LRAT-207ENST00000510733 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
LRAT-207ENST00000510733 ESF1Q9H501 851 aaKnown RBP13.37□□□□□ -0.27
LRAT-207ENST00000510733 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
LRAT-207ENST00000510733 BCANQ96GW7 911 aa13.34□□□□□ -0.27
LRAT-207ENST00000510733 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
LRAT-207ENST00000510733 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
LRAT-207ENST00000510733 ZNF777Q9ULD5 760 aaPredicted RBP13.29□□□□□ -0.28
LRAT-207ENST00000510733 ACIN1Q9UKV3 1341 aaKnown RBP13.22□□□□□ -0.29
LRAT-207ENST00000510733 STAG3Q9UJ98 1225 aa13.21□□□□□ -0.29
LRAT-207ENST00000510733 TONSLQ96HA7 1378 aa13.21□□□□□ -0.29
LRAT-207ENST00000510733 ARID3CA6NKF2 412 aa13.2□□□□□ -0.3
LRAT-207ENST00000510733 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
LRAT-207ENST00000510733 CECR2Q9BXF3 1484 aa13.17□□□□□ -0.3
LRAT-207ENST00000510733 MYO15BQ96JP2 1530 aa13.15□□□□□ -0.3
LRAT-207ENST00000510733 TSPY4P0CV99 314 aa13.14□□□□□ -0.31
LRAT-207ENST00000510733 TSPY10P0CW01 314 aa13.14□□□□□ -0.31
LRAT-207ENST00000510733 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
LRAT-207ENST00000510733 EEA1Q15075 1411 aa13.11□□□□□ -0.31
LRAT-207ENST00000510733 BAZ1BQ9UIG0 1483 aaKnown RBP13.1□□□□□ -0.31
LRAT-207ENST00000510733 CHMP7Q8WUX9 453 aaPredicted RBP13.09□□□□□ -0.31
LRAT-207ENST00000510733 MTUS2Q5JR59 1369 aa13.08□□□□□ -0.31
LRAT-207ENST00000510733 ANP32AP39687 249 aaKnown RBP13.07□□□□□ -0.32
LRAT-207ENST00000510733 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
LRAT-207ENST00000510733 GTF3C3Q9Y5Q9 886 aa13.05□□□□□ -0.32
LRAT-207ENST00000510733 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.03□□□□□ -0.32
LRAT-207ENST00000510733 UPF2Q9HAU5 1272 aaKnown RBP13.02□□□□□ -0.33
LRAT-207ENST00000510733 CLIP1P30622 1438 aa12.99□□□□□ -0.33
LRAT-207ENST00000510733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.33
LRAT-207ENST00000510733 MROH2BQ7Z745 1585 aa12.97□□□□□ -0.33
LRAT-207ENST00000510733 PLEKHD1A6NEE1 506 aa12.97□□□□□ -0.33
LRAT-207ENST00000510733 PRKCSHP14314 528 aaPredicted RBP12.96□□□□□ -0.34
LRAT-207ENST00000510733 WDR43Q15061 677 aaKnown RBP eCLIP12.96□□□□□ -0.34
LRAT-207ENST00000510733 TMC1Q8TDI8 760 aa12.96□□□□□ -0.34
LRAT-207ENST00000510733 ANP32BQ92688 251 aaKnown RBP12.95□□□□□ -0.34
LRAT-207ENST00000510733 CHIC2Q9UKJ5 165 aa12.95□□□□□ -0.34
LRAT-207ENST00000510733 BCL11AQ9H165 835 aa12.94□□□□□ -0.34
LRAT-207ENST00000510733 GOLGA3Q08378 1498 aa12.94□□□□□ -0.34
LRAT-207ENST00000510733 HSP90AA1P07900 732 aaKnown RBP12.93□□□□□ -0.34
LRAT-207ENST00000510733 HNRNPUQ00839 825 aaKnown RBP eCLIP12.93□□□□□ -0.34
LRAT-207ENST00000510733 KIF27Q86VH2 1401 aa12.91□□□□□ -0.34
LRAT-207ENST00000510733 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
LRAT-207ENST00000510733 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
LRAT-207ENST00000510733 WRNQ14191 1432 aaPredicted RBP eCLIP12.88□□□□□ -0.35
LRAT-207ENST00000510733 EIF4G2P78344 907 aaKnown RBP eCLIP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms