RNA–Protein interactions for RNA: ENST00000508541.1

SLIT2-205, Transcript of slit guidance ligand 2, humanhuman

TSL 2

Gene SLIT2, Length 2,947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-205ENST00000508541 NISCHQ9Y2I1 1504 aa16.32■□□□□ 0.2
SLIT2-205ENST00000508541 PELP1Q8IZL8 1130 aaKnown RBP15.76■□□□□ 0.11
SLIT2-205ENST00000508541 HRCP23327 699 aa15.75■□□□□ 0.11
SLIT2-205ENST00000508541 PPARGC1BQ86YN6 1023 aaKnown RBP15.44■□□□□ 0.06
SLIT2-205ENST00000508541 MYT1Q01538 1121 aa15.24■□□□□ 0.03
SLIT2-205ENST00000508541 PCGF6Q9BYE7 350 aa15.19■□□□□ 0.02
SLIT2-205ENST00000508541 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
SLIT2-205ENST00000508541 MYO15BQ96JP2 1530 aa14.96□□□□□ -0.01
SLIT2-205ENST00000508541 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
SLIT2-205ENST00000508541 CHIC1Q5VXU3 224 aa14.66□□□□□ -0.06
SLIT2-205ENST00000508541 DCAF1Q9Y4B6 1507 aa14.64□□□□□ -0.07
SLIT2-205ENST00000508541 ACIN1Q9UKV3 1341 aaKnown RBP14.62□□□□□ -0.07
SLIT2-205ENST00000508541 SHROOM4Q9ULL8 1493 aa14.59□□□□□ -0.07
SLIT2-205ENST00000508541 NEUROD1Q13562 356 aa14.59□□□□□ -0.07
SLIT2-205ENST00000508541 TRIM26Q12899 539 aaPredicted RBP14.56□□□□□ -0.08
SLIT2-205ENST00000508541 ZEB1P37275 1124 aaPredicted RBP14.54□□□□□ -0.08
SLIT2-205ENST00000508541 CCDC180Q9P1Z9 1646 aa14.54□□□□□ -0.08
SLIT2-205ENST00000508541 GTF3C3Q9Y5Q9 886 aa14.52□□□□□ -0.09
SLIT2-205ENST00000508541 TTBK1Q5TCY1 1321 aaPredicted RBP14.44□□□□□ -0.1
SLIT2-205ENST00000508541 LOC105371045A0A1W2PR82 267 aa14.38□□□□□ -0.11
SLIT2-205ENST00000508541 BCL11AQ9H165 835 aa14.32□□□□□ -0.12
SLIT2-205ENST00000508541 CENPBP07199 599 aaPredicted RBP14.29□□□□□ -0.12
SLIT2-205ENST00000508541 FAM9AQ8IZU1 332 aaPredicted RBP14.24□□□□□ -0.13
SLIT2-205ENST00000508541 DIEXFQ68CQ4 756 aaKnown RBP14.11□□□□□ -0.15
SLIT2-205ENST00000508541 PRKCSHP14314 528 aaPredicted RBP14.1□□□□□ -0.15
SLIT2-205ENST00000508541 ANP32EQ9BTT0 268 aa14.01□□□□□ -0.17
SLIT2-205ENST00000508541 YTHDC1Q96MU7 727 aaKnown RBP13.93□□□□□ -0.18
SLIT2-205ENST00000508541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.92□□□□□ -0.18
SLIT2-205ENST00000508541 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
SLIT2-205ENST00000508541 ZCCHC6Q5VYS8 1495 aaKnown RBP13.91□□□□□ -0.18
SLIT2-205ENST00000508541 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
SLIT2-205ENST00000508541 CCER1Q8TC90 406 aaPredicted RBP13.87□□□□□ -0.19
SLIT2-205ENST00000508541 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
SLIT2-205ENST00000508541 MIER1Q8N108 512 aa13.74□□□□□ -0.21
SLIT2-205ENST00000508541 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
SLIT2-205ENST00000508541 SUPT16HQ9Y5B9 1047 aaKnown RBP13.73□□□□□ -0.21
SLIT2-205ENST00000508541 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.22
SLIT2-205ENST00000508541 APLP2Q06481 763 aa13.6□□□□□ -0.23
SLIT2-205ENST00000508541 CLSPNQ9HAW4 1339 aa13.59□□□□□ -0.23
SLIT2-205ENST00000508541 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
SLIT2-205ENST00000508541 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
SLIT2-205ENST00000508541 RBM19Q9Y4C8 960 aaKnown RBP13.41□□□□□ -0.26
SLIT2-205ENST00000508541 ANO8Q9HCE9 1232 aaPredicted RBP13.41□□□□□ -0.26
SLIT2-205ENST00000508541 MSH5O43196 834 aa13.4□□□□□ -0.27
SLIT2-205ENST00000508541 BCANQ96GW7 911 aa13.35□□□□□ -0.27
SLIT2-205ENST00000508541 ABCC9O60706 1549 aa13.24□□□□□ -0.29
SLIT2-205ENST00000508541 FKBP8Q14318 412 aa13.24□□□□□ -0.29
SLIT2-205ENST00000508541 DEKP35659 375 aaKnown RBP13.23□□□□□ -0.29
SLIT2-205ENST00000508541 SALL2Q9Y467 1007 aaPredicted RBP13.22□□□□□ -0.29
SLIT2-205ENST00000508541 WRNQ14191 1432 aaPredicted RBP eCLIP13.21□□□□□ -0.3
SLIT2-205ENST00000508541 RSF1Q96T23 1441 aaPredicted RBP13.18□□□□□ -0.3
SLIT2-205ENST00000508541 FANCIQ9NVI1 1328 aa13.17□□□□□ -0.3
SLIT2-205ENST00000508541 ITGAEP38570 1179 aa13.16□□□□□ -0.3
SLIT2-205ENST00000508541 KCNH8Q96L42 1107 aa13.16□□□□□ -0.3
SLIT2-205ENST00000508541 MYT1LQ9UL68 1186 aa13.15□□□□□ -0.3
SLIT2-205ENST00000508541 CCDC136Q96JN2 1154 aa13.14□□□□□ -0.31
SLIT2-205ENST00000508541 RB1CC1Q8TDY2 1594 aa13.13□□□□□ -0.31
SLIT2-205ENST00000508541 UBE2Q2Q8WVN8 375 aa13.12□□□□□ -0.31
SLIT2-205ENST00000508541 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
SLIT2-205ENST00000508541 ERICH6BQ5W0A0 696 aa13.07□□□□□ -0.32
SLIT2-205ENST00000508541 CEP162Q5TB80 1403 aa13.05□□□□□ -0.32
SLIT2-205ENST00000508541 NEFLP07196 543 aa13.03□□□□□ -0.32
SLIT2-205ENST00000508541 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
SLIT2-205ENST00000508541 IL27Q8NEV9 243 aa12.97□□□□□ -0.33
SLIT2-205ENST00000508541 NBR1Q14596 966 aa12.94□□□□□ -0.34
SLIT2-205ENST00000508541 CDK11AQ9UQ88 783 aaPredicted RBP12.93□□□□□ -0.34
SLIT2-205ENST00000508541 RTN4Q9NQC3 1192 aaKnown RBP12.92□□□□□ -0.34
SLIT2-205ENST00000508541 TNIKQ9UKE5 1360 aa12.9□□□□□ -0.34
SLIT2-205ENST00000508541 DHX57Q6P158 1386 aaKnown RBP12.89□□□□□ -0.35
SLIT2-205ENST00000508541 TRIM52Q96A61 297 aa12.88□□□□□ -0.35
SLIT2-205ENST00000508541 PAK3O75914 559 aaPredicted RBP12.88□□□□□ -0.35
SLIT2-205ENST00000508541 NOP58Q9Y2X3 529 aaKnown RBP12.86□□□□□ -0.35
SLIT2-205ENST00000508541 SCRIBQ14160 1630 aa12.84□□□□□ -0.35
SLIT2-205ENST00000508541 IRX6P78412 446 aaPredicted RBP12.82□□□□□ -0.36
SLIT2-205ENST00000508541 DDX10Q13206 875 aaKnown RBP12.78□□□□□ -0.36
SLIT2-205ENST00000508541 ABCC8Q09428 1581 aa12.77□□□□□ -0.36
SLIT2-205ENST00000508541 PKNOX2Q96KN3 472 aa12.77□□□□□ -0.36
SLIT2-205ENST00000508541 EIF5BO60841 1220 aaKnown RBP12.77□□□□□ -0.37
SLIT2-205ENST00000508541 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
SLIT2-205ENST00000508541 CCDC88BA6NC98 1476 aa12.75□□□□□ -0.37
SLIT2-205ENST00000508541 NACADO15069 1562 aa12.75□□□□□ -0.37
SLIT2-205ENST00000508541 EIF4G1Q04637 1599 aaKnown RBP12.75□□□□□ -0.37
SLIT2-205ENST00000508541 SOGA1O94964 1423 aa12.74□□□□□ -0.37
SLIT2-205ENST00000508541 EEA1Q15075 1411 aa12.74□□□□□ -0.37
SLIT2-205ENST00000508541 RTL5Q5HYW3 569 aaPredicted RBP12.74□□□□□ -0.37
SLIT2-205ENST00000508541 CCER2I3L3R5 266 aa12.72□□□□□ -0.37
SLIT2-205ENST00000508541 MROH2BQ7Z745 1585 aa12.72□□□□□ -0.37
SLIT2-205ENST00000508541 PPP1R15AO75807 674 aaPredicted RBP12.72□□□□□ -0.37
SLIT2-205ENST00000508541 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
SLIT2-205ENST00000508541 PPP4R2Q9NY27 417 aa12.69□□□□□ -0.38
SLIT2-205ENST00000508541 WASHC2AQ641Q2 1341 aa12.69□□□□□ -0.38
SLIT2-205ENST00000508541 WIZO95785 1651 aa12.68□□□□□ -0.38
SLIT2-205ENST00000508541 GOLGA3Q08378 1498 aa12.68□□□□□ -0.38
SLIT2-205ENST00000508541 RUSC2Q8N2Y8 1516 aa12.67□□□□□ -0.38
SLIT2-205ENST00000508541 C11orf95C9JLR9 678 aaPredicted RBP12.67□□□□□ -0.38
SLIT2-205ENST00000508541 BAZ1AQ9NRL2 1556 aaPredicted RBP12.65□□□□□ -0.38
SLIT2-205ENST00000508541 CLIP1P30622 1438 aa12.65□□□□□ -0.38
SLIT2-205ENST00000508541 B4GALNT3Q6L9W6 998 aa12.65□□□□□ -0.38
SLIT2-205ENST00000508541 IPO9Q96P70 1041 aaKnown RBP12.65□□□□□ -0.38
SLIT2-205ENST00000508541 VPS8Q8N3P4 1428 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms