RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 AEBP2Q6ZN18 517 aaPredicted RBP22.46■■□□□ 1.19
SMAD5-201ENST00000506223 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
SMAD5-201ENST00000506223 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
SMAD5-201ENST00000506223 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
SMAD5-201ENST00000506223 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
SMAD5-201ENST00000506223 FOXD1Q16676 465 aa17.58■□□□□ 0.4
SMAD5-201ENST00000506223 ADRA2BP18089 450 aa17.24■□□□□ 0.35
SMAD5-201ENST00000506223 PPP6R1Q9UPN7 881 aa17.23■□□□□ 0.35
SMAD5-201ENST00000506223 PIAS4Q8N2W9 510 aaPredicted RBP16.69■□□□□ 0.26
SMAD5-201ENST00000506223 KCNA4P22459 653 aa16.28■□□□□ 0.2
SMAD5-201ENST00000506223 PPP4R3CPQ6ZMV5 832 aa16.18■□□□□ 0.18
SMAD5-201ENST00000506223 MSH5O43196 834 aa16.05■□□□□ 0.16
SMAD5-201ENST00000506223 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
SMAD5-201ENST00000506223 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
SMAD5-201ENST00000506223 NISCHQ9Y2I1 1504 aa15.74■□□□□ 0.11
SMAD5-201ENST00000506223 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
SMAD5-201ENST00000506223 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.09
SMAD5-201ENST00000506223 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
SMAD5-201ENST00000506223 SLC4A1APQ9BWU0 796 aaKnown RBP15.57■□□□□ 0.08
SMAD5-201ENST00000506223 MAPK8IP2Q13387 824 aaPredicted RBP15.52■□□□□ 0.08
SMAD5-201ENST00000506223 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
SMAD5-201ENST00000506223 DMRT2Q9Y5R5 561 aa15.23■□□□□ 0.03
SMAD5-201ENST00000506223 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
SMAD5-201ENST00000506223 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
SMAD5-201ENST00000506223 HOXD11P31277 338 aaPredicted RBP15.06■□□□□ 0
SMAD5-201ENST00000506223 ZBTB22O15209 634 aa14.98□□□□□ -0.01
SMAD5-201ENST00000506223 ABCC9O60706 1549 aa14.92□□□□□ -0.02
SMAD5-201ENST00000506223 FOXD4L1Q9NU39 408 aa14.86□□□□□ -0.03
SMAD5-201ENST00000506223 SLC4A2P04920 1241 aa14.68□□□□□ -0.06
SMAD5-201ENST00000506223 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
SMAD5-201ENST00000506223 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
SMAD5-201ENST00000506223 CCDC180Q9P1Z9 1646 aa14.38□□□□□ -0.11
SMAD5-201ENST00000506223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.11
SMAD5-201ENST00000506223 ATXN8OSP0DMR3 200 aa14.3□□□□□ -0.12
SMAD5-201ENST00000506223 U3KPZ7 1027 aaPredicted RBP14.18□□□□□ -0.14
SMAD5-201ENST00000506223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
SMAD5-201ENST00000506223 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
SMAD5-201ENST00000506223 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
SMAD5-201ENST00000506223 POTEDQ86YR6 584 aa14.09□□□□□ -0.15
SMAD5-201ENST00000506223 ATF5Q9Y2D1 282 aaPredicted RBP14.04□□□□□ -0.16
SMAD5-201ENST00000506223 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
SMAD5-201ENST00000506223 APLP2Q06481 763 aa13.89□□□□□ -0.19
SMAD5-201ENST00000506223 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMAD5-201ENST00000506223 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
SMAD5-201ENST00000506223 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
SMAD5-201ENST00000506223 FKBP8Q14318 412 aa13.75□□□□□ -0.21
SMAD5-201ENST00000506223 UNC13AQ9UPW8 1703 aa13.74□□□□□ -0.21
SMAD5-201ENST00000506223 NACADO15069 1562 aa13.69□□□□□ -0.22
SMAD5-201ENST00000506223 SPINK5Q9NQ38 1064 aaPredicted RBP13.67□□□□□ -0.22
SMAD5-201ENST00000506223 DNAJC5Q9H3Z4 198 aa13.66□□□□□ -0.22
SMAD5-201ENST00000506223 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
SMAD5-201ENST00000506223 TRHP20396 242 aaPredicted RBP13.63□□□□□ -0.23
SMAD5-201ENST00000506223 BICRAQ9NZM4 1560 aa13.61□□□□□ -0.23
SMAD5-201ENST00000506223 CAPN15O75808 1086 aa13.59□□□□□ -0.23
SMAD5-201ENST00000506223 DCAF8L2P0C7V8 631 aa13.5□□□□□ -0.25
SMAD5-201ENST00000506223 POLA2Q14181 598 aa13.49□□□□□ -0.25
SMAD5-201ENST00000506223 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
SMAD5-201ENST00000506223 CC2D2AQ9P2K1 1620 aa13.46□□□□□ -0.25
SMAD5-201ENST00000506223 MKRN4PQ13434 485 aaPredicted RBP13.45□□□□□ -0.26
SMAD5-201ENST00000506223 FBLN2P98095 1184 aa13.42□□□□□ -0.26
SMAD5-201ENST00000506223 ABCB7O75027 752 aa13.38□□□□□ -0.27
SMAD5-201ENST00000506223 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
SMAD5-201ENST00000506223 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
SMAD5-201ENST00000506223 MYO15BQ96JP2 1530 aa13.29□□□□□ -0.28
SMAD5-201ENST00000506223 EIF4G1Q04637 1599 aaKnown RBP13.28□□□□□ -0.28
SMAD5-201ENST00000506223 DSG3P32926 999 aa13.26□□□□□ -0.29
SMAD5-201ENST00000506223 SHROOM4Q9ULL8 1493 aa13.25□□□□□ -0.29
SMAD5-201ENST00000506223 AMER1Q5JTC6 1135 aaPredicted RBP13.23□□□□□ -0.29
SMAD5-201ENST00000506223 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.29
SMAD5-201ENST00000506223 PROM2Q8N271 834 aa13.17□□□□□ -0.3
SMAD5-201ENST00000506223 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
SMAD5-201ENST00000506223 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
SMAD5-201ENST00000506223 SCRIBQ14160 1630 aa13.1□□□□□ -0.31
SMAD5-201ENST00000506223 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
SMAD5-201ENST00000506223 CUX2O14529 1486 aa13.04□□□□□ -0.32
SMAD5-201ENST00000506223 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
SMAD5-201ENST00000506223 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
SMAD5-201ENST00000506223 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
SMAD5-201ENST00000506223 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
SMAD5-201ENST00000506223 VASPP50552 380 aaPredicted RBP12.96□□□□□ -0.33
SMAD5-201ENST00000506223 DCAF1Q9Y4B6 1507 aa12.93□□□□□ -0.34
SMAD5-201ENST00000506223 ZCCHC6Q5VYS8 1495 aaKnown RBP12.93□□□□□ -0.34
SMAD5-201ENST00000506223 SSUH2Q9Y2M2 353 aa12.92□□□□□ -0.34
SMAD5-201ENST00000506223 ERCC6Q03468 1493 aa12.88□□□□□ -0.35
SMAD5-201ENST00000506223 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
SMAD5-201ENST00000506223 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
SMAD5-201ENST00000506223 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
SMAD5-201ENST00000506223 NESP48681 1621 aa12.69□□□□□ -0.38
SMAD5-201ENST00000506223 THOC2Q8NI27 1593 aaKnown RBP12.67□□□□□ -0.38
SMAD5-201ENST00000506223 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
SMAD5-201ENST00000506223 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
SMAD5-201ENST00000506223 NCAPD3P42695 1498 aa12.64□□□□□ -0.39
SMAD5-201ENST00000506223 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
SMAD5-201ENST00000506223 MIER1Q8N108 512 aa12.6□□□□□ -0.39
SMAD5-201ENST00000506223 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
SMAD5-201ENST00000506223 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
SMAD5-201ENST00000506223 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
SMAD5-201ENST00000506223 ATAD2BQ9ULI0 1458 aa12.54□□□□□ -0.4
SMAD5-201ENST00000506223 SMARCA2P51531 1590 aa12.54□□□□□ -0.4
SMAD5-201ENST00000506223 KIF21AQ7Z4S6 1674 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms