RNA–Protein interactions for RNA: ENST00000498432.5

LINC00877-208, long intergenic non-protein coding RNA 877, humanhuman

TSL 3

Gene LINC00877, Length 573 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00877-208ENST00000498432 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
LINC00877-208ENST00000498432 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
LINC00877-208ENST00000498432 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
LINC00877-208ENST00000498432 NISCHQ9Y2I1 1504 aa18.24■□□□□ 0.51
LINC00877-208ENST00000498432 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
LINC00877-208ENST00000498432 PLPPR3Q6T4P5 718 aa16.98■□□□□ 0.31
LINC00877-208ENST00000498432 FOXD1Q16676 465 aa16.76■□□□□ 0.27
LINC00877-208ENST00000498432 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
LINC00877-208ENST00000498432 ADRA2BP18089 450 aa16.13■□□□□ 0.17
LINC00877-208ENST00000498432 PPP6R1Q9UPN7 881 aa16.13■□□□□ 0.17
LINC00877-208ENST00000498432 ABCC9O60706 1549 aa16.11■□□□□ 0.17
LINC00877-208ENST00000498432 PIAS4Q8N2W9 510 aaPredicted RBP15.82■□□□□ 0.12
LINC00877-208ENST00000498432 MSH5O43196 834 aa15.49■□□□□ 0.07
LINC00877-208ENST00000498432 DCAF8L2P0C7V8 631 aa15.44■□□□□ 0.06
LINC00877-208ENST00000498432 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
LINC00877-208ENST00000498432 NACADO15069 1562 aa15.29■□□□□ 0.04
LINC00877-208ENST00000498432 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
LINC00877-208ENST00000498432 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
LINC00877-208ENST00000498432 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0
LINC00877-208ENST00000498432 DCAF1Q9Y4B6 1507 aa15.02■□□□□ -0
LINC00877-208ENST00000498432 UNC13AQ9UPW8 1703 aa14.99□□□□□ -0.01
LINC00877-208ENST00000498432 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
LINC00877-208ENST00000498432 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
LINC00877-208ENST00000498432 BICRAQ9NZM4 1560 aa14.91□□□□□ -0.02
LINC00877-208ENST00000498432 SCRIBQ14160 1630 aa14.88□□□□□ -0.03
LINC00877-208ENST00000498432 SCAF1Q9H7N4 1312 aaKnown RBP14.84□□□□□ -0.03
LINC00877-208ENST00000498432 SHROOM4Q9ULL8 1493 aa14.65□□□□□ -0.06
LINC00877-208ENST00000498432 KCNA4P22459 653 aa14.61□□□□□ -0.07
LINC00877-208ENST00000498432 MAPK8IP2Q13387 824 aaPredicted RBP14.6□□□□□ -0.07
LINC00877-208ENST00000498432 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
LINC00877-208ENST00000498432 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
LINC00877-208ENST00000498432 EIF4G1Q04637 1599 aaKnown RBP14.53□□□□□ -0.08
LINC00877-208ENST00000498432 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
LINC00877-208ENST00000498432 DMRT2Q9Y5R5 561 aa14.46□□□□□ -0.09
LINC00877-208ENST00000498432 CECR2Q9BXF3 1484 aa14.45□□□□□ -0.1
LINC00877-208ENST00000498432 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
LINC00877-208ENST00000498432 RNF216Q9NWF9 866 aaPredicted RBP14.24□□□□□ -0.13
LINC00877-208ENST00000498432 HOXD11P31277 338 aaPredicted RBP14.18□□□□□ -0.14
LINC00877-208ENST00000498432 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
LINC00877-208ENST00000498432 ATAD2BQ9ULI0 1458 aa14.15□□□□□ -0.14
LINC00877-208ENST00000498432 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
LINC00877-208ENST00000498432 NCAPD3P42695 1498 aa14.13□□□□□ -0.15
LINC00877-208ENST00000498432 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
LINC00877-208ENST00000498432 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
LINC00877-208ENST00000498432 BAZ1BQ9UIG0 1483 aaKnown RBP14.03□□□□□ -0.16
LINC00877-208ENST00000498432 HMGXB3Q12766 1538 aa14.03□□□□□ -0.16
LINC00877-208ENST00000498432 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
LINC00877-208ENST00000498432 PEG3Q9GZU2 1588 aa13.99□□□□□ -0.17
LINC00877-208ENST00000498432 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
LINC00877-208ENST00000498432 WIZO95785 1651 aa13.94□□□□□ -0.18
LINC00877-208ENST00000498432 NESP48681 1621 aa13.9□□□□□ -0.18
LINC00877-208ENST00000498432 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
LINC00877-208ENST00000498432 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
LINC00877-208ENST00000498432 DCAF8L1A6NGE4 600 aa13.77□□□□□ -0.21
LINC00877-208ENST00000498432 LAMC3Q9Y6N6 1575 aa13.75□□□□□ -0.21
LINC00877-208ENST00000498432 TOP2AP11388 1531 aaKnown RBP13.75□□□□□ -0.21
LINC00877-208ENST00000498432 CADPSQ9ULU8 1353 aa13.74□□□□□ -0.21
LINC00877-208ENST00000498432 CUX2O14529 1486 aa13.7□□□□□ -0.22
LINC00877-208ENST00000498432 PDS5BQ9NTI5 1447 aa13.7□□□□□ -0.22
LINC00877-208ENST00000498432 KIF21AQ7Z4S6 1674 aa13.68□□□□□ -0.22
LINC00877-208ENST00000498432 THOC2Q8NI27 1593 aaKnown RBP13.65□□□□□ -0.22
LINC00877-208ENST00000498432 CCDC88BA6NC98 1476 aa13.62□□□□□ -0.23
LINC00877-208ENST00000498432 CFTRP13569 1480 aa13.61□□□□□ -0.23
LINC00877-208ENST00000498432 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
LINC00877-208ENST00000498432 MRC2Q9UBG0 1479 aa13.58□□□□□ -0.24
LINC00877-208ENST00000498432 CEP164Q9UPV0 1460 aa13.57□□□□□ -0.24
LINC00877-208ENST00000498432 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
LINC00877-208ENST00000498432 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
LINC00877-208ENST00000498432 SLC4A2P04920 1241 aa13.52□□□□□ -0.25
LINC00877-208ENST00000498432 WDR62O43379 1518 aa13.51□□□□□ -0.25
LINC00877-208ENST00000498432 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.25
LINC00877-208ENST00000498432 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
LINC00877-208ENST00000498432 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
LINC00877-208ENST00000498432 URB2Q14146 1524 aaKnown RBP13.47□□□□□ -0.25
LINC00877-208ENST00000498432 ZBTB22O15209 634 aa13.43□□□□□ -0.26
LINC00877-208ENST00000498432 PRDM2Q13029 1718 aa13.43□□□□□ -0.26
LINC00877-208ENST00000498432 CSRNP3Q8WYN3 585 aa13.4□□□□□ -0.26
LINC00877-208ENST00000498432 TOPBP1Q92547 1522 aa13.35□□□□□ -0.27
LINC00877-208ENST00000498432 DNMBPQ6XZF7 1577 aa13.31□□□□□ -0.28
LINC00877-208ENST00000498432 ABCC8Q09428 1581 aa13.29□□□□□ -0.28
LINC00877-208ENST00000498432 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
LINC00877-208ENST00000498432 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
LINC00877-208ENST00000498432 ZNF608Q9ULD9 1512 aaPredicted RBP13.29□□□□□ -0.28
LINC00877-208ENST00000498432 RNF39Q9H2S5 420 aa13.26□□□□□ -0.29
LINC00877-208ENST00000498432 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
LINC00877-208ENST00000498432 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
LINC00877-208ENST00000498432 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
LINC00877-208ENST00000498432 CUX1P39880 1505 aa13.22□□□□□ -0.29
LINC00877-208ENST00000498432 AQRO60306 1485 aaKnown RBP eCLIP13.21□□□□□ -0.3
LINC00877-208ENST00000498432 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.3
LINC00877-208ENST00000498432 SOGA1O94964 1423 aa13.2□□□□□ -0.3
LINC00877-208ENST00000498432 TARBP1Q13395 1621 aaKnown RBP13.19□□□□□ -0.3
LINC00877-208ENST00000498432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.18□□□□□ -0.3
LINC00877-208ENST00000498432 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
LINC00877-208ENST00000498432 EIF4G3O43432 1585 aaKnown RBP13.18□□□□□ -0.3
LINC00877-208ENST00000498432 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
LINC00877-208ENST00000498432 TDRD9Q8NDG6 1382 aaKnown RBP13.17□□□□□ -0.3
LINC00877-208ENST00000498432 C1QBPQ07021 282 aaKnown RBP13.13□□□□□ -0.31
LINC00877-208ENST00000498432 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
LINC00877-208ENST00000498432 FBLN2P98095 1184 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms