RNA–Protein interactions for RNA: ENST00000496404.1

CHD5-206, Transcript of chromodomain helicase DNA binding protein 5, humanhuman

TSL 2

Gene CHD5, Length 4,966 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5-206ENST00000496404 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
CHD5-206ENST00000496404 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
CHD5-206ENST00000496404 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
CHD5-206ENST00000496404 SHROOM4Q9ULL8 1493 aa23.02■■□□□ 1.28
CHD5-206ENST00000496404 EHMT2Q96KQ7 1210 aa22.46■■□□□ 1.19
CHD5-206ENST00000496404 FAM9AQ8IZU1 332 aaPredicted RBP22.02■■□□□ 1.12
CHD5-206ENST00000496404 PCGF6Q9BYE7 350 aa22■■□□□ 1.11
CHD5-206ENST00000496404 APLP2Q06481 763 aa21.94■■□□□ 1.1
CHD5-206ENST00000496404 PELP1Q8IZL8 1130 aaKnown RBP21.76■■□□□ 1.07
CHD5-206ENST00000496404 TTBK1Q5TCY1 1321 aaPredicted RBP21.72■■□□□ 1.07
CHD5-206ENST00000496404 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
CHD5-206ENST00000496404 ZEB1P37275 1124 aaPredicted RBP21.54■■□□□ 1.04
CHD5-206ENST00000496404 CCER1Q8TC90 406 aaPredicted RBP21.44■■□□□ 1.02
CHD5-206ENST00000496404 RANGAP1P46060 587 aaPredicted RBP21.43■■□□□ 1.02
CHD5-206ENST00000496404 CENPBP07199 599 aaPredicted RBP21.34■■□□□ 1.01
CHD5-206ENST00000496404 UBTFP17480 764 aaKnown RBP21.31■■□□□ 1
CHD5-206ENST00000496404 ATP1B4Q9UN42 357 aaPredicted RBP21.14■□□□□ 0.97
CHD5-206ENST00000496404 TRIM26Q12899 539 aaPredicted RBP21.1■□□□□ 0.97
CHD5-206ENST00000496404 PPARGC1BQ86YN6 1023 aaKnown RBP21.1■□□□□ 0.97
CHD5-206ENST00000496404 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
CHD5-206ENST00000496404 HRCP23327 699 aa21.02■□□□□ 0.96
CHD5-206ENST00000496404 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
CHD5-206ENST00000496404 YTHDC1Q96MU7 727 aaKnown RBP20.91■□□□□ 0.94
CHD5-206ENST00000496404 MYT1Q01538 1121 aa20.82■□□□□ 0.92
CHD5-206ENST00000496404 ERICH6Q7L0X2 663 aa20.82■□□□□ 0.92
CHD5-206ENST00000496404 NEFLP07196 543 aa20.75■□□□□ 0.91
CHD5-206ENST00000496404 ITGAEP38570 1179 aa20.61■□□□□ 0.89
CHD5-206ENST00000496404 HNRNPUL2Q1KMD3 747 aaKnown RBP20.6■□□□□ 0.89
CHD5-206ENST00000496404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.46■□□□□ 0.87
CHD5-206ENST00000496404 DIEXFQ68CQ4 756 aaKnown RBP20.32■□□□□ 0.84
CHD5-206ENST00000496404 POLR3GLQ9BT43 218 aa20.27■□□□□ 0.84
CHD5-206ENST00000496404 ABCC9O60706 1549 aa20.24■□□□□ 0.83
CHD5-206ENST00000496404 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
CHD5-206ENST00000496404 CNGB1Q14028 1251 aaPredicted RBP20.12■□□□□ 0.81
CHD5-206ENST00000496404 MYT1LQ9UL68 1186 aa20.11■□□□□ 0.81
CHD5-206ENST00000496404 FAM50AQ14320 339 aaKnown RBP20.1■□□□□ 0.81
CHD5-206ENST00000496404 DAXXQ9UER7 740 aaPredicted RBP19.98■□□□□ 0.79
CHD5-206ENST00000496404 NEUROD1Q13562 356 aa19.96■□□□□ 0.79
CHD5-206ENST00000496404 TRIM52Q96A61 297 aa19.92■□□□□ 0.78
CHD5-206ENST00000496404 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
CHD5-206ENST00000496404 GTF3C3Q9Y5Q9 886 aa19.92■□□□□ 0.78
CHD5-206ENST00000496404 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
CHD5-206ENST00000496404 ZCCHC6Q5VYS8 1495 aaKnown RBP19.78■□□□□ 0.76
CHD5-206ENST00000496404 ANP32CO43423 234 aa19.77■□□□□ 0.75
CHD5-206ENST00000496404 BCANQ96GW7 911 aa19.74■□□□□ 0.75
CHD5-206ENST00000496404 SLC4A1APQ9BWU0 796 aaKnown RBP19.74■□□□□ 0.75
CHD5-206ENST00000496404 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
CHD5-206ENST00000496404 P3H3Q8IVL6 736 aa19.68■□□□□ 0.74
CHD5-206ENST00000496404 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
CHD5-206ENST00000496404 ZNF326Q5BKZ1 582 aaKnown RBP19.67■□□□□ 0.74
CHD5-206ENST00000496404 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
CHD5-206ENST00000496404 RTL5Q5HYW3 569 aaPredicted RBP19.63■□□□□ 0.73
CHD5-206ENST00000496404 SCRIBQ14160 1630 aa19.6■□□□□ 0.73
CHD5-206ENST00000496404 FBLN2P98095 1184 aa19.57■□□□□ 0.72
CHD5-206ENST00000496404 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
CHD5-206ENST00000496404 ARID3CA6NKF2 412 aa19.52■□□□□ 0.71
CHD5-206ENST00000496404 ZNF777Q9ULD5 760 aaPredicted RBP19.37■□□□□ 0.69
CHD5-206ENST00000496404 TONSLQ96HA7 1378 aa19.34■□□□□ 0.69
CHD5-206ENST00000496404 MYO15BQ96JP2 1530 aa19.33■□□□□ 0.69
CHD5-206ENST00000496404 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.68
CHD5-206ENST00000496404 DDX10Q13206 875 aaKnown RBP19.32■□□□□ 0.68
CHD5-206ENST00000496404 FKBP8Q14318 412 aa19.28■□□□□ 0.68
CHD5-206ENST00000496404 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
CHD5-206ENST00000496404 HNRNPUQ00839 825 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHD5-206ENST00000496404 CANXP27824 592 aaKnown RBP19.22■□□□□ 0.67
CHD5-206ENST00000496404 CLIP1P30622 1438 aa19.2■□□□□ 0.66
CHD5-206ENST00000496404 ZBTB47Q9UFB7 747 aaPredicted RBP19.18■□□□□ 0.66
CHD5-206ENST00000496404 MIER1Q8N108 512 aa19.18■□□□□ 0.66
CHD5-206ENST00000496404 CHIC2Q9UKJ5 165 aa19.17■□□□□ 0.66
CHD5-206ENST00000496404 ANP32AP39687 249 aaKnown RBP19.16■□□□□ 0.66
CHD5-206ENST00000496404 FAM9BQ8IZU0 186 aa19.15■□□□□ 0.66
CHD5-206ENST00000496404 SCAF1Q9H7N4 1312 aaKnown RBP19.13■□□□□ 0.65
CHD5-206ENST00000496404 NEFMP07197 916 aa19.1■□□□□ 0.65
CHD5-206ENST00000496404 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
CHD5-206ENST00000496404 EEA1Q15075 1411 aa19.09■□□□□ 0.65
CHD5-206ENST00000496404 MTUS2Q5JR59 1369 aa19.07■□□□□ 0.64
CHD5-206ENST00000496404 NPM2Q86SE8 214 aaKnown RBP19.07■□□□□ 0.64
CHD5-206ENST00000496404 BCL11AQ9H165 835 aa19.06■□□□□ 0.64
CHD5-206ENST00000496404 GOLGA3Q08378 1498 aa19.05■□□□□ 0.64
CHD5-206ENST00000496404 HIRIP3Q9BW71 556 aaPredicted RBP19.03■□□□□ 0.64
CHD5-206ENST00000496404 TMC1Q8TDI8 760 aa19.01■□□□□ 0.63
CHD5-206ENST00000496404 SALL2Q9Y467 1007 aaPredicted RBP19■□□□□ 0.63
CHD5-206ENST00000496404 MRS2Q9HD23 443 aa18.99■□□□□ 0.63
CHD5-206ENST00000496404 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.63
CHD5-206ENST00000496404 SLC24A1O60721 1099 aa18.98■□□□□ 0.63
CHD5-206ENST00000496404 CHGAP10645 457 aaKnown RBP18.98■□□□□ 0.63
CHD5-206ENST00000496404 TNIKQ9UKE5 1360 aa18.98■□□□□ 0.63
CHD5-206ENST00000496404 TSPY4P0CV99 314 aa18.97■□□□□ 0.63
CHD5-206ENST00000496404 TSPY10P0CW01 314 aa18.97■□□□□ 0.63
CHD5-206ENST00000496404 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
CHD5-206ENST00000496404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.95■□□□□ 0.62
CHD5-206ENST00000496404 CCDC136Q96JN2 1154 aa18.94■□□□□ 0.62
CHD5-206ENST00000496404 KDM2AQ9Y2K7 1162 aa18.93■□□□□ 0.62
CHD5-206ENST00000496404 RRP7BPQ9NSQ0 103 aa18.93■□□□□ 0.62
CHD5-206ENST00000496404 EIF4G2P78344 907 aaKnown RBP eCLIP18.92■□□□□ 0.62
CHD5-206ENST00000496404 IRX6P78412 446 aaPredicted RBP18.86■□□□□ 0.61
CHD5-206ENST00000496404 NACADO15069 1562 aa18.86■□□□□ 0.61
CHD5-206ENST00000496404 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
CHD5-206ENST00000496404 CHMP7Q8WUX9 453 aaPredicted RBP18.85■□□□□ 0.61
CHD5-206ENST00000496404 STAG3Q9UJ98 1225 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms