RNA–Protein interactions for RNA: ENST00000495727.2

RC3H2-209, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 2

Gene RC3H2, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-209ENST00000495727 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
RC3H2-209ENST00000495727 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
RC3H2-209ENST00000495727 PHF23Q9BUL5 403 aaPredicted RBP17.77■□□□□ 0.44
RC3H2-209ENST00000495727 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
RC3H2-209ENST00000495727 PLPPR3Q6T4P5 718 aa16.54■□□□□ 0.24
RC3H2-209ENST00000495727 FOXD1Q16676 465 aa16.26■□□□□ 0.19
RC3H2-209ENST00000495727 PPP6R1Q9UPN7 881 aa15.63■□□□□ 0.09
RC3H2-209ENST00000495727 ADRA2BP18089 450 aa15.62■□□□□ 0.09
RC3H2-209ENST00000495727 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
RC3H2-209ENST00000495727 MSH5O43196 834 aa15.09■□□□□ 0.01
RC3H2-209ENST00000495727 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
RC3H2-209ENST00000495727 SCAF1Q9H7N4 1312 aaKnown RBP14.45□□□□□ -0.1
RC3H2-209ENST00000495727 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
RC3H2-209ENST00000495727 KCNA4P22459 653 aa14.21□□□□□ -0.13
RC3H2-209ENST00000495727 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
RC3H2-209ENST00000495727 MAPK8IP2Q13387 824 aaPredicted RBP14.13□□□□□ -0.15
RC3H2-209ENST00000495727 DMRT2Q9Y5R5 561 aa14.06□□□□□ -0.16
RC3H2-209ENST00000495727 NPM3O75607 178 aaKnown RBP13.95□□□□□ -0.18
RC3H2-209ENST00000495727 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
RC3H2-209ENST00000495727 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
RC3H2-209ENST00000495727 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
RC3H2-209ENST00000495727 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
RC3H2-209ENST00000495727 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
RC3H2-209ENST00000495727 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
RC3H2-209ENST00000495727 EHMT2Q96KQ7 1210 aa13.19□□□□□ -0.3
RC3H2-209ENST00000495727 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
RC3H2-209ENST00000495727 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
RC3H2-209ENST00000495727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.31
RC3H2-209ENST00000495727 ZBTB22O15209 634 aa13.06□□□□□ -0.32
RC3H2-209ENST00000495727 CSRNP3Q8WYN3 585 aa13.05□□□□□ -0.32
RC3H2-209ENST00000495727 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
RC3H2-209ENST00000495727 U3KPZ7 1027 aaPredicted RBP12.9□□□□□ -0.34
RC3H2-209ENST00000495727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
RC3H2-209ENST00000495727 HNRNPUL2Q1KMD3 747 aaKnown RBP12.88□□□□□ -0.35
RC3H2-209ENST00000495727 RNF39Q9H2S5 420 aa12.88□□□□□ -0.35
RC3H2-209ENST00000495727 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
RC3H2-209ENST00000495727 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
RC3H2-209ENST00000495727 APLP2Q06481 763 aa12.76□□□□□ -0.37
RC3H2-209ENST00000495727 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
RC3H2-209ENST00000495727 ABCC9O60706 1549 aa12.68□□□□□ -0.38
RC3H2-209ENST00000495727 NISCHQ9Y2I1 1504 aa12.57□□□□□ -0.4
RC3H2-209ENST00000495727 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
RC3H2-209ENST00000495727 CACNB1Q02641 598 aaPredicted RBP12.47□□□□□ -0.41
RC3H2-209ENST00000495727 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
RC3H2-209ENST00000495727 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
RC3H2-209ENST00000495727 CAPN15O75808 1086 aa12.46□□□□□ -0.41
RC3H2-209ENST00000495727 DNAJC5Q9H3Z4 198 aa12.41□□□□□ -0.42
RC3H2-209ENST00000495727 TRHP20396 242 aaPredicted RBP12.38□□□□□ -0.43
RC3H2-209ENST00000495727 DSG3P32926 999 aa12.25□□□□□ -0.45
RC3H2-209ENST00000495727 POLA2Q14181 598 aa12.22□□□□□ -0.45
RC3H2-209ENST00000495727 ABCB7O75027 752 aa12.18□□□□□ -0.46
RC3H2-209ENST00000495727 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
RC3H2-209ENST00000495727 FBLN2P98095 1184 aa12.07□□□□□ -0.48
RC3H2-209ENST00000495727 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
RC3H2-209ENST00000495727 CCDC180Q9P1Z9 1646 aa11.88□□□□□ -0.51
RC3H2-209ENST00000495727 OSCARQ8IYS5 282 aa11.81□□□□□ -0.52
RC3H2-209ENST00000495727 FKBP8Q14318 412 aa11.8□□□□□ -0.52
RC3H2-209ENST00000495727 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
RC3H2-209ENST00000495727 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
RC3H2-209ENST00000495727 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
RC3H2-209ENST00000495727 SPDYE4A6NLX3 237 aa11.77□□□□□ -0.53
RC3H2-209ENST00000495727 RBM42Q9BTD8 480 aaKnown RBP11.77□□□□□ -0.53
RC3H2-209ENST00000495727 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
RC3H2-209ENST00000495727 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
RC3H2-209ENST00000495727 RB1CC1Q8TDY2 1594 aa11.69□□□□□ -0.54
RC3H2-209ENST00000495727 PROM2Q8N271 834 aa11.64□□□□□ -0.55
RC3H2-209ENST00000495727 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
RC3H2-209ENST00000495727 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
RC3H2-209ENST00000495727 CECR2Q9BXF3 1484 aa11.53□□□□□ -0.56
RC3H2-209ENST00000495727 PABPN1Q86U42 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
RC3H2-209ENST00000495727 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
RC3H2-209ENST00000495727 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
RC3H2-209ENST00000495727 STAG3Q9UJ98 1225 aa11.44□□□□□ -0.58
RC3H2-209ENST00000495727 BICRAQ9NZM4 1560 aa11.44□□□□□ -0.58
RC3H2-209ENST00000495727 REM2Q8IYK8 340 aaPredicted RBP11.43□□□□□ -0.58
RC3H2-209ENST00000495727 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
RC3H2-209ENST00000495727 TRIM41Q8WV44 630 aa11.42□□□□□ -0.58
RC3H2-209ENST00000495727 CUX2O14529 1486 aa11.38□□□□□ -0.59
RC3H2-209ENST00000495727 NACADO15069 1562 aa11.35□□□□□ -0.59
RC3H2-209ENST00000495727 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
RC3H2-209ENST00000495727 CLEC11AQ9Y240 323 aa11.27□□□□□ -0.61
RC3H2-209ENST00000495727 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
RC3H2-209ENST00000495727 PRR29P0C7W0 189 aa11.22□□□□□ -0.61
RC3H2-209ENST00000495727 EIF4G1Q04637 1599 aaKnown RBP11.2□□□□□ -0.62
RC3H2-209ENST00000495727 PLEKHG5O94827 1062 aa11.18□□□□□ -0.62
RC3H2-209ENST00000495727 CHRDL2Q6WN34 429 aa11.18□□□□□ -0.62
RC3H2-209ENST00000495727 SHROOM4Q9ULL8 1493 aa11.14□□□□□ -0.63
RC3H2-209ENST00000495727 PLCD3Q8N3E9 789 aa11.14□□□□□ -0.63
RC3H2-209ENST00000495727 MIER1Q8N108 512 aa11.13□□□□□ -0.63
RC3H2-209ENST00000495727 ZBTB47Q9UFB7 747 aaPredicted RBP11.12□□□□□ -0.63
RC3H2-209ENST00000495727 FXR2P51116 673 aaKnown RBP eCLIP11.1□□□□□ -0.63
RC3H2-209ENST00000495727 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
RC3H2-209ENST00000495727 IFNLR1Q8IU57 520 aaPredicted RBP11.06□□□□□ -0.64
RC3H2-209ENST00000495727 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
RC3H2-209ENST00000495727 PRKAR2AP13861 404 aaKnown RBP11.01□□□□□ -0.65
RC3H2-209ENST00000495727 KLHL34Q8N239 644 aa11.01□□□□□ -0.65
RC3H2-209ENST00000495727 ERCC6Q03468 1493 aa11□□□□□ -0.65
RC3H2-209ENST00000495727 MNX1P50219 401 aaPredicted RBP10.97□□□□□ -0.65
RC3H2-209ENST00000495727 SPOCK2Q92563 424 aa10.97□□□□□ -0.65
RC3H2-209ENST00000495727 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms