RNA–Protein interactions for RNA: ENST00000495388.6

CTNND2-203, Transcript of catenin delta 2, humanhuman

TSL 2

Gene CTNND2, Length 3,684 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-203ENST00000495388 NISCHQ9Y2I1 1504 aa21.08■□□□□ 0.97
CTNND2-203ENST00000495388 SHROOM4Q9ULL8 1493 aa19.08■□□□□ 0.64
CTNND2-203ENST00000495388 SUPT5HO00267 1087 aaKnown RBP18.93■□□□□ 0.62
CTNND2-203ENST00000495388 DCAF8L2P0C7V8 631 aa18.53■□□□□ 0.56
CTNND2-203ENST00000495388 PCGF6Q9BYE7 350 aa18.26■□□□□ 0.51
CTNND2-203ENST00000495388 HRCP23327 699 aa18.15■□□□□ 0.5
CTNND2-203ENST00000495388 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
CTNND2-203ENST00000495388 PPARGC1BQ86YN6 1023 aaKnown RBP18.07■□□□□ 0.48
CTNND2-203ENST00000495388 MYO15BQ96JP2 1530 aa18.01■□□□□ 0.47
CTNND2-203ENST00000495388 LOC105371045A0A1W2PR82 267 aa17.91■□□□□ 0.46
CTNND2-203ENST00000495388 ZCCHC6Q5VYS8 1495 aaKnown RBP17.8■□□□□ 0.44
CTNND2-203ENST00000495388 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
CTNND2-203ENST00000495388 CCDC180Q9P1Z9 1646 aa17.63■□□□□ 0.41
CTNND2-203ENST00000495388 FAM9AQ8IZU1 332 aaPredicted RBP17.62■□□□□ 0.41
CTNND2-203ENST00000495388 TRIM26Q12899 539 aaPredicted RBP17.52■□□□□ 0.39
CTNND2-203ENST00000495388 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
CTNND2-203ENST00000495388 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
CTNND2-203ENST00000495388 TTBK1Q5TCY1 1321 aaPredicted RBP17.22■□□□□ 0.35
CTNND2-203ENST00000495388 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
CTNND2-203ENST00000495388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
CTNND2-203ENST00000495388 SCAF1Q9H7N4 1312 aaKnown RBP17.04■□□□□ 0.32
CTNND2-203ENST00000495388 CCER1Q8TC90 406 aaPredicted RBP17.04■□□□□ 0.32
CTNND2-203ENST00000495388 SCRIBQ14160 1630 aa16.97■□□□□ 0.31
CTNND2-203ENST00000495388 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
CTNND2-203ENST00000495388 PELP1Q8IZL8 1130 aaKnown RBP16.91■□□□□ 0.3
CTNND2-203ENST00000495388 RB1CC1Q8TDY2 1594 aa16.83■□□□□ 0.29
CTNND2-203ENST00000495388 ABCC9O60706 1549 aa16.83■□□□□ 0.28
CTNND2-203ENST00000495388 NEUROD1Q13562 356 aa16.77■□□□□ 0.28
CTNND2-203ENST00000495388 YTHDC1Q96MU7 727 aaKnown RBP16.75■□□□□ 0.27
CTNND2-203ENST00000495388 DIEXFQ68CQ4 756 aaKnown RBP16.75■□□□□ 0.27
CTNND2-203ENST00000495388 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
CTNND2-203ENST00000495388 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
CTNND2-203ENST00000495388 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
CTNND2-203ENST00000495388 CECR2Q9BXF3 1484 aa16.68■□□□□ 0.26
CTNND2-203ENST00000495388 UBTFP17480 764 aaKnown RBP16.67■□□□□ 0.26
CTNND2-203ENST00000495388 RANGAP1P46060 587 aaPredicted RBP16.63■□□□□ 0.25
CTNND2-203ENST00000495388 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
CTNND2-203ENST00000495388 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
CTNND2-203ENST00000495388 WIZO95785 1651 aa16.46■□□□□ 0.23
CTNND2-203ENST00000495388 ZNF316A6NFI3 1004 aaPredicted RBP16.43■□□□□ 0.22
CTNND2-203ENST00000495388 NACADO15069 1562 aa16.41■□□□□ 0.22
CTNND2-203ENST00000495388 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
CTNND2-203ENST00000495388 CEP162Q5TB80 1403 aa16.38■□□□□ 0.21
CTNND2-203ENST00000495388 APLP2Q06481 763 aa16.38■□□□□ 0.21
CTNND2-203ENST00000495388 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
CTNND2-203ENST00000495388 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
CTNND2-203ENST00000495388 SOGA1O94964 1423 aa16.35■□□□□ 0.21
CTNND2-203ENST00000495388 MIER1Q8N108 512 aa16.34■□□□□ 0.21
CTNND2-203ENST00000495388 PABPN1Q86U42 306 aaKnown RBP eCLIP16.28■□□□□ 0.2
CTNND2-203ENST00000495388 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
CTNND2-203ENST00000495388 TNIKQ9UKE5 1360 aa16.2■□□□□ 0.18
CTNND2-203ENST00000495388 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
CTNND2-203ENST00000495388 ITGAEP38570 1179 aa16.15■□□□□ 0.18
CTNND2-203ENST00000495388 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
CTNND2-203ENST00000495388 MYT1Q01538 1121 aa16.08■□□□□ 0.16
CTNND2-203ENST00000495388 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
CTNND2-203ENST00000495388 CLIP1P30622 1438 aa16.06■□□□□ 0.16
CTNND2-203ENST00000495388 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
CTNND2-203ENST00000495388 SMARCA2P51531 1590 aa16■□□□□ 0.15
CTNND2-203ENST00000495388 EEA1Q15075 1411 aa16■□□□□ 0.15
CTNND2-203ENST00000495388 EIF4G1Q04637 1599 aaKnown RBP15.98■□□□□ 0.15
CTNND2-203ENST00000495388 BCANQ96GW7 911 aa15.97■□□□□ 0.15
CTNND2-203ENST00000495388 SMARCA4P51532 1647 aa15.95■□□□□ 0.14
CTNND2-203ENST00000495388 CEP164Q9UPV0 1460 aa15.92■□□□□ 0.14
CTNND2-203ENST00000495388 ATP1B4Q9UN42 357 aaPredicted RBP15.9■□□□□ 0.14
CTNND2-203ENST00000495388 VPS8Q8N3P4 1428 aa15.88■□□□□ 0.13
CTNND2-203ENST00000495388 KANK4Q5T7N3 995 aaPredicted RBP15.87■□□□□ 0.13
CTNND2-203ENST00000495388 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
CTNND2-203ENST00000495388 RAPGEF2Q9Y4G8 1499 aa15.86■□□□□ 0.13
CTNND2-203ENST00000495388 KCNH8Q96L42 1107 aa15.82■□□□□ 0.12
CTNND2-203ENST00000495388 HIRIP3Q9BW71 556 aaPredicted RBP15.79■□□□□ 0.12
CTNND2-203ENST00000495388 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.12
CTNND2-203ENST00000495388 SYNJ1O43426 1573 aa15.77■□□□□ 0.12
CTNND2-203ENST00000495388 DHX57Q6P158 1386 aaKnown RBP15.77■□□□□ 0.12
CTNND2-203ENST00000495388 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
CTNND2-203ENST00000495388 FAM50AQ14320 339 aaKnown RBP15.75■□□□□ 0.11
CTNND2-203ENST00000495388 FKBP8Q14318 412 aa15.72■□□□□ 0.11
CTNND2-203ENST00000495388 P3H3Q8IVL6 736 aa15.72■□□□□ 0.11
CTNND2-203ENST00000495388 KIF21BO75037 1637 aa15.7■□□□□ 0.1
CTNND2-203ENST00000495388 TSHZ2Q9NRE2 1034 aa15.69■□□□□ 0.1
CTNND2-203ENST00000495388 BAZ1BQ9UIG0 1483 aaKnown RBP15.68■□□□□ 0.1
CTNND2-203ENST00000495388 NEFLP07196 543 aa15.68■□□□□ 0.1
CTNND2-203ENST00000495388 SIN3AQ96ST3 1273 aa15.68■□□□□ 0.1
CTNND2-203ENST00000495388 TRIM52Q96A61 297 aa15.67■□□□□ 0.1
CTNND2-203ENST00000495388 BICRAQ9NZM4 1560 aa15.65■□□□□ 0.1
CTNND2-203ENST00000495388 CLSPNQ9HAW4 1339 aa15.63■□□□□ 0.09
CTNND2-203ENST00000495388 CCNB3Q8WWL7 1395 aa15.61■□□□□ 0.09
CTNND2-203ENST00000495388 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
CTNND2-203ENST00000495388 RAB3GAP2Q9H2M9 1393 aa15.56■□□□□ 0.08
CTNND2-203ENST00000495388 ARAP1Q96P48 1450 aa15.56■□□□□ 0.08
CTNND2-203ENST00000495388 ANP32EQ9BTT0 268 aa15.55■□□□□ 0.08
CTNND2-203ENST00000495388 ANP32CO43423 234 aa15.53■□□□□ 0.08
CTNND2-203ENST00000495388 IRX6P78412 446 aaPredicted RBP15.52■□□□□ 0.07
CTNND2-203ENST00000495388 PEG3Q9GZU2 1588 aa15.51■□□□□ 0.07
CTNND2-203ENST00000495388 KIF27Q86VH2 1401 aa15.5■□□□□ 0.07
CTNND2-203ENST00000495388 CNGB1Q14028 1251 aaPredicted RBP15.48■□□□□ 0.07
CTNND2-203ENST00000495388 PRXQ9BXM0 1461 aa15.44■□□□□ 0.06
CTNND2-203ENST00000495388 RRBP1Q9P2E9 1410 aaKnown RBP15.43■□□□□ 0.06
CTNND2-203ENST00000495388 ERICH6Q7L0X2 663 aa15.42■□□□□ 0.06
CTNND2-203ENST00000495388 SETD5Q9C0A6 1442 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms