RNA–Protein interactions for RNA: ENST00000495203.5

PROCA1-206, Transcript of protein interacting with cyclin A1, humanhuman

TSL 1 (best)

Gene PROCA1, Length 3,168 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROCA1-206ENST00000495203 NISCHQ9Y2I1 1504 aa21.1■□□□□ 0.97
PROCA1-206ENST00000495203 HRCP23327 699 aa19.59■□□□□ 0.73
PROCA1-206ENST00000495203 PPARGC1BQ86YN6 1023 aaKnown RBP19.49■□□□□ 0.71
PROCA1-206ENST00000495203 PCGF6Q9BYE7 350 aa19.42■□□□□ 0.7
PROCA1-206ENST00000495203 SUPT5HO00267 1087 aaKnown RBP19.41■□□□□ 0.7
PROCA1-206ENST00000495203 SHROOM4Q9ULL8 1493 aa19.36■□□□□ 0.69
PROCA1-206ENST00000495203 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
PROCA1-206ENST00000495203 MYO15BQ96JP2 1530 aa18.85■□□□□ 0.61
PROCA1-206ENST00000495203 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
PROCA1-206ENST00000495203 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
PROCA1-206ENST00000495203 LOC105371045A0A1W2PR82 267 aa18.64■□□□□ 0.57
PROCA1-206ENST00000495203 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
PROCA1-206ENST00000495203 TRIM26Q12899 539 aaPredicted RBP18.48■□□□□ 0.55
PROCA1-206ENST00000495203 DCAF8L2P0C7V8 631 aa18.34■□□□□ 0.53
PROCA1-206ENST00000495203 ZEB1P37275 1124 aaPredicted RBP18.3■□□□□ 0.52
PROCA1-206ENST00000495203 MYT1Q01538 1121 aa18.27■□□□□ 0.52
PROCA1-206ENST00000495203 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
PROCA1-206ENST00000495203 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
PROCA1-206ENST00000495203 NEUROD1Q13562 356 aa18.21■□□□□ 0.51
PROCA1-206ENST00000495203 GTF3C3Q9Y5Q9 886 aa18.2■□□□□ 0.5
PROCA1-206ENST00000495203 ACIN1Q9UKV3 1341 aaKnown RBP18.17■□□□□ 0.5
PROCA1-206ENST00000495203 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
PROCA1-206ENST00000495203 CENPBP07199 599 aaPredicted RBP18.01■□□□□ 0.47
PROCA1-206ENST00000495203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
PROCA1-206ENST00000495203 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
PROCA1-206ENST00000495203 CCER1Q8TC90 406 aaPredicted RBP17.91■□□□□ 0.46
PROCA1-206ENST00000495203 DIEXFQ68CQ4 756 aaKnown RBP17.89■□□□□ 0.45
PROCA1-206ENST00000495203 TTBK1Q5TCY1 1321 aaPredicted RBP17.8■□□□□ 0.44
PROCA1-206ENST00000495203 TRIM41Q8WV44 630 aa17.75■□□□□ 0.43
PROCA1-206ENST00000495203 ZCCHC6Q5VYS8 1495 aaKnown RBP17.72■□□□□ 0.43
PROCA1-206ENST00000495203 ABCC9O60706 1549 aa17.54■□□□□ 0.4
PROCA1-206ENST00000495203 MIER1Q8N108 512 aa17.42■□□□□ 0.38
PROCA1-206ENST00000495203 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
PROCA1-206ENST00000495203 BCL11AQ9H165 835 aa17.36■□□□□ 0.37
PROCA1-206ENST00000495203 NACADO15069 1562 aa17.29■□□□□ 0.36
PROCA1-206ENST00000495203 ANP32EQ9BTT0 268 aa17.21■□□□□ 0.35
PROCA1-206ENST00000495203 RB1CC1Q8TDY2 1594 aa17.16■□□□□ 0.34
PROCA1-206ENST00000495203 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
PROCA1-206ENST00000495203 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
PROCA1-206ENST00000495203 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
PROCA1-206ENST00000495203 BCANQ96GW7 911 aa17.13■□□□□ 0.33
PROCA1-206ENST00000495203 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
PROCA1-206ENST00000495203 RSF1Q96T23 1441 aaPredicted RBP17■□□□□ 0.31
PROCA1-206ENST00000495203 UNC13AQ9UPW8 1703 aa16.98■□□□□ 0.31
PROCA1-206ENST00000495203 UBTFP17480 764 aaKnown RBP16.95■□□□□ 0.3
PROCA1-206ENST00000495203 SCRIBQ14160 1630 aa16.93■□□□□ 0.3
PROCA1-206ENST00000495203 RANGAP1P46060 587 aaPredicted RBP16.86■□□□□ 0.29
PROCA1-206ENST00000495203 FKBP8Q14318 412 aa16.83■□□□□ 0.28
PROCA1-206ENST00000495203 ITGAEP38570 1179 aa16.8■□□□□ 0.28
PROCA1-206ENST00000495203 CLSPNQ9HAW4 1339 aa16.79■□□□□ 0.28
PROCA1-206ENST00000495203 KCNH8Q96L42 1107 aa16.78■□□□□ 0.28
PROCA1-206ENST00000495203 CEP162Q5TB80 1403 aa16.78■□□□□ 0.28
PROCA1-206ENST00000495203 BICRAQ9NZM4 1560 aa16.76■□□□□ 0.27
PROCA1-206ENST00000495203 RBM19Q9Y4C8 960 aaKnown RBP16.74■□□□□ 0.27
PROCA1-206ENST00000495203 ERICH6Q7L0X2 663 aa16.72■□□□□ 0.27
PROCA1-206ENST00000495203 APLP2Q06481 763 aa16.71■□□□□ 0.27
PROCA1-206ENST00000495203 NEFLP07196 543 aa16.69■□□□□ 0.26
PROCA1-206ENST00000495203 PRKCSHP14314 528 aaPredicted RBP16.69■□□□□ 0.26
PROCA1-206ENST00000495203 WRNQ14191 1432 aaPredicted RBP eCLIP16.63■□□□□ 0.25
PROCA1-206ENST00000495203 TRIM52Q96A61 297 aa16.59■□□□□ 0.25
PROCA1-206ENST00000495203 SOGA1O94964 1423 aa16.57■□□□□ 0.24
PROCA1-206ENST00000495203 MSH5O43196 834 aa16.56■□□□□ 0.24
PROCA1-206ENST00000495203 CECR2Q9BXF3 1484 aa16.55■□□□□ 0.24
PROCA1-206ENST00000495203 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
PROCA1-206ENST00000495203 TNIKQ9UKE5 1360 aa16.53■□□□□ 0.24
PROCA1-206ENST00000495203 DDX10Q13206 875 aaKnown RBP16.52■□□□□ 0.23
PROCA1-206ENST00000495203 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
PROCA1-206ENST00000495203 IRX6P78412 446 aaPredicted RBP16.5■□□□□ 0.23
PROCA1-206ENST00000495203 HIRIP3Q9BW71 556 aaPredicted RBP16.46■□□□□ 0.23
PROCA1-206ENST00000495203 RUSC2Q8N2Y8 1516 aa16.45■□□□□ 0.22
PROCA1-206ENST00000495203 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
PROCA1-206ENST00000495203 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
PROCA1-206ENST00000495203 DEKP35659 375 aaKnown RBP16.41■□□□□ 0.22
PROCA1-206ENST00000495203 NBR1Q14596 966 aa16.4■□□□□ 0.22
PROCA1-206ENST00000495203 WIZO95785 1651 aa16.4■□□□□ 0.22
PROCA1-206ENST00000495203 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
PROCA1-206ENST00000495203 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
PROCA1-206ENST00000495203 DHX57Q6P158 1386 aaKnown RBP16.38■□□□□ 0.21
PROCA1-206ENST00000495203 CLIP1P30622 1438 aa16.33■□□□□ 0.21
PROCA1-206ENST00000495203 GOLGA3Q08378 1498 aa16.31■□□□□ 0.2
PROCA1-206ENST00000495203 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
PROCA1-206ENST00000495203 BAZ1AQ9NRL2 1556 aaPredicted RBP16.29■□□□□ 0.2
PROCA1-206ENST00000495203 ANP32CO43423 234 aa16.27■□□□□ 0.2
PROCA1-206ENST00000495203 CCDC136Q96JN2 1154 aa16.27■□□□□ 0.19
PROCA1-206ENST00000495203 RTN4Q9NQC3 1192 aaKnown RBP16.26■□□□□ 0.19
PROCA1-206ENST00000495203 HNRNPUQ00839 825 aaKnown RBP eCLIP16.24■□□□□ 0.19
PROCA1-206ENST00000495203 FANCIQ9NVI1 1328 aa16.23■□□□□ 0.19
PROCA1-206ENST00000495203 KANK4Q5T7N3 995 aaPredicted RBP16.22■□□□□ 0.19
PROCA1-206ENST00000495203 SIN3AQ96ST3 1273 aa16.22■□□□□ 0.19
PROCA1-206ENST00000495203 VPS8Q8N3P4 1428 aa16.21■□□□□ 0.19
PROCA1-206ENST00000495203 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
PROCA1-206ENST00000495203 EIF4G1Q04637 1599 aaKnown RBP16.19■□□□□ 0.18
PROCA1-206ENST00000495203 PEG3Q9GZU2 1588 aa16.19■□□□□ 0.18
PROCA1-206ENST00000495203 EEA1Q15075 1411 aa16.16■□□□□ 0.18
PROCA1-206ENST00000495203 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.16■□□□□ 0.18
PROCA1-206ENST00000495203 B4GALNT3Q6L9W6 998 aa16.15■□□□□ 0.18
PROCA1-206ENST00000495203 MYT1LQ9UL68 1186 aa16.13■□□□□ 0.17
PROCA1-206ENST00000495203 RTL5Q5HYW3 569 aaPredicted RBP16.12■□□□□ 0.17
PROCA1-206ENST00000495203 PAK3O75914 559 aaPredicted RBP16.11■□□□□ 0.17
PROCA1-206ENST00000495203 NOP58Q9Y2X3 529 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms