RNA–Protein interactions for RNA: ENST00000493023.1

C1QTNF6-206, Transcript of C1q and TNF related 6, humanhuman

TSL 1 (best)

Gene C1QTNF6, Length 3,296 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF6-206ENST00000493023 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
C1QTNF6-206ENST00000493023 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
C1QTNF6-206ENST00000493023 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
C1QTNF6-206ENST00000493023 SUPT5HO00267 1087 aaKnown RBP20.09■□□□□ 0.81
C1QTNF6-206ENST00000493023 PCGF6Q9BYE7 350 aa19.43■□□□□ 0.7
C1QTNF6-206ENST00000493023 HRCP23327 699 aa19.31■□□□□ 0.68
C1QTNF6-206ENST00000493023 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
C1QTNF6-206ENST00000493023 PPARGC1BQ86YN6 1023 aaKnown RBP19.24■□□□□ 0.67
C1QTNF6-206ENST00000493023 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
C1QTNF6-206ENST00000493023 LOC105371045A0A1W2PR82 267 aa19.05■□□□□ 0.64
C1QTNF6-206ENST00000493023 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
C1QTNF6-206ENST00000493023 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
C1QTNF6-206ENST00000493023 FAM9AQ8IZU1 332 aaPredicted RBP18.7■□□□□ 0.58
C1QTNF6-206ENST00000493023 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
C1QTNF6-206ENST00000493023 TRIM26Q12899 539 aaPredicted RBP18.61■□□□□ 0.57
C1QTNF6-206ENST00000493023 ABCC9O60706 1549 aa18.57■□□□□ 0.56
C1QTNF6-206ENST00000493023 TRIM41Q8WV44 630 aa18.45■□□□□ 0.54
C1QTNF6-206ENST00000493023 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
C1QTNF6-206ENST00000493023 TTBK1Q5TCY1 1321 aaPredicted RBP18.28■□□□□ 0.52
C1QTNF6-206ENST00000493023 SCRIBQ14160 1630 aa18.27■□□□□ 0.52
C1QTNF6-206ENST00000493023 ZEB1P37275 1124 aaPredicted RBP18.26■□□□□ 0.51
C1QTNF6-206ENST00000493023 SCAF1Q9H7N4 1312 aaKnown RBP18.15■□□□□ 0.5
C1QTNF6-206ENST00000493023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
C1QTNF6-206ENST00000493023 CCER1Q8TC90 406 aaPredicted RBP18.09■□□□□ 0.49
C1QTNF6-206ENST00000493023 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.49
C1QTNF6-206ENST00000493023 RSF1Q96T23 1441 aaPredicted RBP17.99■□□□□ 0.47
C1QTNF6-206ENST00000493023 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
C1QTNF6-206ENST00000493023 CECR2Q9BXF3 1484 aa17.92■□□□□ 0.46
C1QTNF6-206ENST00000493023 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
C1QTNF6-206ENST00000493023 RB1CC1Q8TDY2 1594 aa17.84■□□□□ 0.45
C1QTNF6-206ENST00000493023 DIEXFQ68CQ4 756 aaKnown RBP17.81■□□□□ 0.44
C1QTNF6-206ENST00000493023 YTHDC1Q96MU7 727 aaKnown RBP17.81■□□□□ 0.44
C1QTNF6-206ENST00000493023 GTF3C3Q9Y5Q9 886 aa17.8■□□□□ 0.44
C1QTNF6-206ENST00000493023 ACIN1Q9UKV3 1341 aaKnown RBP17.79■□□□□ 0.44
C1QTNF6-206ENST00000493023 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
C1QTNF6-206ENST00000493023 RANGAP1P46060 587 aaPredicted RBP17.7■□□□□ 0.42
C1QTNF6-206ENST00000493023 UBTFP17480 764 aaKnown RBP17.68■□□□□ 0.42
C1QTNF6-206ENST00000493023 MROH2BQ7Z745 1585 aa17.67■□□□□ 0.42
C1QTNF6-206ENST00000493023 NACADO15069 1562 aa17.61■□□□□ 0.41
C1QTNF6-206ENST00000493023 HNRNPUL2Q1KMD3 747 aaKnown RBP17.59■□□□□ 0.41
C1QTNF6-206ENST00000493023 WIZO95785 1651 aa17.51■□□□□ 0.39
C1QTNF6-206ENST00000493023 ZNF316A6NFI3 1004 aaPredicted RBP17.46■□□□□ 0.39
C1QTNF6-206ENST00000493023 MIER1Q8N108 512 aa17.39■□□□□ 0.37
C1QTNF6-206ENST00000493023 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
C1QTNF6-206ENST00000493023 ABCC8Q09428 1581 aa17.37■□□□□ 0.37
C1QTNF6-206ENST00000493023 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
C1QTNF6-206ENST00000493023 CCDC88BA6NC98 1476 aa17.36■□□□□ 0.37
C1QTNF6-206ENST00000493023 SOGA1O94964 1423 aa17.36■□□□□ 0.37
C1QTNF6-206ENST00000493023 APLP2Q06481 763 aa17.35■□□□□ 0.37
C1QTNF6-206ENST00000493023 BAZ1AQ9NRL2 1556 aaPredicted RBP17.26■□□□□ 0.35
C1QTNF6-206ENST00000493023 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
C1QTNF6-206ENST00000493023 TNIKQ9UKE5 1360 aa17.18■□□□□ 0.34
C1QTNF6-206ENST00000493023 ITGAEP38570 1179 aa17.14■□□□□ 0.33
C1QTNF6-206ENST00000493023 WRNQ14191 1432 aaPredicted RBP eCLIP17.12■□□□□ 0.33
C1QTNF6-206ENST00000493023 SMARCA4P51532 1647 aa17.1■□□□□ 0.33
C1QTNF6-206ENST00000493023 MYT1Q01538 1121 aa17.09■□□□□ 0.33
C1QTNF6-206ENST00000493023 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
C1QTNF6-206ENST00000493023 TOP2AP11388 1531 aaKnown RBP17.03■□□□□ 0.32
C1QTNF6-206ENST00000493023 CLIP1P30622 1438 aa17.02■□□□□ 0.32
C1QTNF6-206ENST00000493023 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
C1QTNF6-206ENST00000493023 BCANQ96GW7 911 aa16.97■□□□□ 0.31
C1QTNF6-206ENST00000493023 BAZ1BQ9UIG0 1483 aaKnown RBP16.96■□□□□ 0.31
C1QTNF6-206ENST00000493023 ATP1B4Q9UN42 357 aaPredicted RBP16.96■□□□□ 0.31
C1QTNF6-206ENST00000493023 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
C1QTNF6-206ENST00000493023 BICRAQ9NZM4 1560 aa16.95■□□□□ 0.3
C1QTNF6-206ENST00000493023 EEA1Q15075 1411 aa16.93■□□□□ 0.3
C1QTNF6-206ENST00000493023 EIF4G1Q04637 1599 aaKnown RBP16.93■□□□□ 0.3
C1QTNF6-206ENST00000493023 ATAD2BQ9ULI0 1458 aa16.9■□□□□ 0.3
C1QTNF6-206ENST00000493023 SUPT16HQ9Y5B9 1047 aaKnown RBP16.89■□□□□ 0.29
C1QTNF6-206ENST00000493023 KANK4Q5T7N3 995 aaPredicted RBP16.87■□□□□ 0.29
C1QTNF6-206ENST00000493023 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
C1QTNF6-206ENST00000493023 KCNH8Q96L42 1107 aa16.85■□□□□ 0.29
C1QTNF6-206ENST00000493023 VPS8Q8N3P4 1428 aa16.83■□□□□ 0.29
C1QTNF6-206ENST00000493023 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
C1QTNF6-206ENST00000493023 P3H3Q8IVL6 736 aa16.83■□□□□ 0.28
C1QTNF6-206ENST00000493023 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
C1QTNF6-206ENST00000493023 DHX57Q6P158 1386 aaKnown RBP16.75■□□□□ 0.27
C1QTNF6-206ENST00000493023 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
C1QTNF6-206ENST00000493023 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
C1QTNF6-206ENST00000493023 FKBP8Q14318 412 aa16.71■□□□□ 0.27
C1QTNF6-206ENST00000493023 FAM50AQ14320 339 aaKnown RBP16.71■□□□□ 0.26
C1QTNF6-206ENST00000493023 TSHZ2Q9NRE2 1034 aa16.7■□□□□ 0.26
C1QTNF6-206ENST00000493023 TRIM52Q96A61 297 aa16.67■□□□□ 0.26
C1QTNF6-206ENST00000493023 SIN3AQ96ST3 1273 aa16.66■□□□□ 0.26
C1QTNF6-206ENST00000493023 KIF21BO75037 1637 aa16.65■□□□□ 0.26
C1QTNF6-206ENST00000493023 DNAJC5BQ9UF47 199 aa16.64■□□□□ 0.25
C1QTNF6-206ENST00000493023 NEFLP07196 543 aa16.62■□□□□ 0.25
C1QTNF6-206ENST00000493023 CLSPNQ9HAW4 1339 aa16.59■□□□□ 0.25
C1QTNF6-206ENST00000493023 ARID3CA6NKF2 412 aa16.57■□□□□ 0.24
C1QTNF6-206ENST00000493023 CCNB3Q8WWL7 1395 aa16.56■□□□□ 0.24
C1QTNF6-206ENST00000493023 ANP32EQ9BTT0 268 aa16.55■□□□□ 0.24
C1QTNF6-206ENST00000493023 RAB3GAP2Q9H2M9 1393 aa16.52■□□□□ 0.24
C1QTNF6-206ENST00000493023 ARAP1Q96P48 1450 aa16.5■□□□□ 0.23
C1QTNF6-206ENST00000493023 IRX6P78412 446 aaPredicted RBP16.5■□□□□ 0.23
C1QTNF6-206ENST00000493023 ANP32CO43423 234 aa16.48■□□□□ 0.23
C1QTNF6-206ENST00000493023 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
C1QTNF6-206ENST00000493023 CUX2O14529 1486 aa16.47■□□□□ 0.23
C1QTNF6-206ENST00000493023 KIF27Q86VH2 1401 aa16.46■□□□□ 0.23
C1QTNF6-206ENST00000493023 NCAPD3P42695 1498 aa16.45■□□□□ 0.22
C1QTNF6-206ENST00000493023 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms