RNA–Protein interactions for RNA: ENST00000492048.5

LAMA1-206, Transcript of laminin subunit alpha 1, humanhuman

TSL 2

Gene LAMA1, Length 2,306 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-206ENST00000492048 NISCHQ9Y2I1 1504 aa25.94■■□□□ 1.74
LAMA1-206ENST00000492048 PELP1Q8IZL8 1130 aaKnown RBP24.62■■□□□ 1.53
LAMA1-206ENST00000492048 HRCP23327 699 aa24.32■■□□□ 1.48
LAMA1-206ENST00000492048 MYT1Q01538 1121 aa23.96■■□□□ 1.43
LAMA1-206ENST00000492048 PPARGC1BQ86YN6 1023 aaKnown RBP23.43■■□□□ 1.34
LAMA1-206ENST00000492048 PCGF6Q9BYE7 350 aa23.26■■□□□ 1.31
LAMA1-206ENST00000492048 SCAF1Q9H7N4 1312 aaKnown RBP23.21■■□□□ 1.31
LAMA1-206ENST00000492048 MYO15BQ96JP2 1530 aa23.11■■□□□ 1.29
LAMA1-206ENST00000492048 DCAF1Q9Y4B6 1507 aa22.98■■□□□ 1.27
LAMA1-206ENST00000492048 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
LAMA1-206ENST00000492048 CCDC180Q9P1Z9 1646 aa22.86■■□□□ 1.25
LAMA1-206ENST00000492048 ZEB1P37275 1124 aaPredicted RBP22.79■■□□□ 1.24
LAMA1-206ENST00000492048 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
LAMA1-206ENST00000492048 TRIM26Q12899 539 aaPredicted RBP22.62■■□□□ 1.21
LAMA1-206ENST00000492048 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
LAMA1-206ENST00000492048 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
LAMA1-206ENST00000492048 SHROOM4Q9ULL8 1493 aa22.37■■□□□ 1.17
LAMA1-206ENST00000492048 NEUROD1Q13562 356 aa22.34■■□□□ 1.17
LAMA1-206ENST00000492048 ABCC9O60706 1549 aa22.32■■□□□ 1.16
LAMA1-206ENST00000492048 GTF3C3Q9Y5Q9 886 aa22.27■■□□□ 1.16
LAMA1-206ENST00000492048 CENPBP07199 599 aaPredicted RBP22.23■■□□□ 1.15
LAMA1-206ENST00000492048 LOC105371045A0A1W2PR82 267 aa21.97■■□□□ 1.11
LAMA1-206ENST00000492048 BCL11AQ9H165 835 aa21.94■■□□□ 1.1
LAMA1-206ENST00000492048 PRKCSHP14314 528 aaPredicted RBP21.91■■□□□ 1.1
LAMA1-206ENST00000492048 DCAF8L2P0C7V8 631 aa21.86■■□□□ 1.09
LAMA1-206ENST00000492048 DIEXFQ68CQ4 756 aaKnown RBP21.77■■□□□ 1.08
LAMA1-206ENST00000492048 ZCCHC6Q5VYS8 1495 aaKnown RBP21.74■■□□□ 1.07
LAMA1-206ENST00000492048 FAM9AQ8IZU1 332 aaPredicted RBP21.69■■□□□ 1.06
LAMA1-206ENST00000492048 ERICH6Q7L0X2 663 aa21.64■■□□□ 1.05
LAMA1-206ENST00000492048 ANP32EQ9BTT0 268 aa21.64■■□□□ 1.05
LAMA1-206ENST00000492048 APLP2Q06481 763 aa21.52■■□□□ 1.04
LAMA1-206ENST00000492048 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
LAMA1-206ENST00000492048 CLSPNQ9HAW4 1339 aa21.48■■□□□ 1.03
LAMA1-206ENST00000492048 NACADO15069 1562 aa21.4■■□□□ 1.02
LAMA1-206ENST00000492048 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
LAMA1-206ENST00000492048 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
LAMA1-206ENST00000492048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.32■■□□□ 1
LAMA1-206ENST00000492048 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
LAMA1-206ENST00000492048 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
LAMA1-206ENST00000492048 TSHZ2Q9NRE2 1034 aa21.22■□□□□ 0.99
LAMA1-206ENST00000492048 YTHDC1Q96MU7 727 aaKnown RBP21.21■□□□□ 0.99
LAMA1-206ENST00000492048 SUPT16HQ9Y5B9 1047 aaKnown RBP21.15■□□□□ 0.98
LAMA1-206ENST00000492048 MIER1Q8N108 512 aa21.09■□□□□ 0.97
LAMA1-206ENST00000492048 SCRIBQ14160 1630 aa21.07■□□□□ 0.96
LAMA1-206ENST00000492048 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
LAMA1-206ENST00000492048 UNC13AQ9UPW8 1703 aa20.99■□□□□ 0.95
LAMA1-206ENST00000492048 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
LAMA1-206ENST00000492048 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
LAMA1-206ENST00000492048 SLC24A1O60721 1099 aa20.8■□□□□ 0.92
LAMA1-206ENST00000492048 MYT1LQ9UL68 1186 aa20.71■□□□□ 0.91
LAMA1-206ENST00000492048 RBM19Q9Y4C8 960 aaKnown RBP20.65■□□□□ 0.9
LAMA1-206ENST00000492048 RSF1Q96T23 1441 aaPredicted RBP20.54■□□□□ 0.88
LAMA1-206ENST00000492048 FANCIQ9NVI1 1328 aa20.5■□□□□ 0.87
LAMA1-206ENST00000492048 MSH5O43196 834 aa20.49■□□□□ 0.87
LAMA1-206ENST00000492048 EHMT2Q96KQ7 1210 aa20.45■□□□□ 0.87
LAMA1-206ENST00000492048 ERICH6BQ5W0A0 696 aa20.44■□□□□ 0.86
LAMA1-206ENST00000492048 ANO8Q9HCE9 1232 aaPredicted RBP20.39■□□□□ 0.85
LAMA1-206ENST00000492048 CEP162Q5TB80 1403 aa20.36■□□□□ 0.85
LAMA1-206ENST00000492048 FKBP8Q14318 412 aa20.35■□□□□ 0.85
LAMA1-206ENST00000492048 DEKP35659 375 aaKnown RBP20.33■□□□□ 0.85
LAMA1-206ENST00000492048 CECR2Q9BXF3 1484 aa20.32■□□□□ 0.84
LAMA1-206ENST00000492048 BCANQ96GW7 911 aa20.31■□□□□ 0.84
LAMA1-206ENST00000492048 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
LAMA1-206ENST00000492048 UBE2Q2Q8WVN8 375 aa20.29■□□□□ 0.84
LAMA1-206ENST00000492048 DAXXQ9UER7 740 aaPredicted RBP20.28■□□□□ 0.84
LAMA1-206ENST00000492048 TNIKQ9UKE5 1360 aa20.26■□□□□ 0.83
LAMA1-206ENST00000492048 NEFLP07196 543 aa20.25■□□□□ 0.83
LAMA1-206ENST00000492048 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
LAMA1-206ENST00000492048 EIF5BO60841 1220 aaKnown RBP20.15■□□□□ 0.82
LAMA1-206ENST00000492048 SALL2Q9Y467 1007 aaPredicted RBP20.15■□□□□ 0.82
LAMA1-206ENST00000492048 CC2D2AQ9P2K1 1620 aa20.11■□□□□ 0.81
LAMA1-206ENST00000492048 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
LAMA1-206ENST00000492048 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.81
LAMA1-206ENST00000492048 SMARCA4P51532 1647 aa20.07■□□□□ 0.8
LAMA1-206ENST00000492048 DHX57Q6P158 1386 aaKnown RBP20.06■□□□□ 0.8
LAMA1-206ENST00000492048 CDK11AQ9UQ88 783 aaPredicted RBP20.05■□□□□ 0.8
LAMA1-206ENST00000492048 BAZ1AQ9NRL2 1556 aaPredicted RBP20.05■□□□□ 0.8
LAMA1-206ENST00000492048 ITGAEP38570 1179 aa20.04■□□□□ 0.8
LAMA1-206ENST00000492048 EEA1Q15075 1411 aa20.03■□□□□ 0.8
LAMA1-206ENST00000492048 KCNH8Q96L42 1107 aa20.02■□□□□ 0.8
LAMA1-206ENST00000492048 GOLGA3Q08378 1498 aa19.91■□□□□ 0.78
LAMA1-206ENST00000492048 ATAD2BQ9ULI0 1458 aa19.91■□□□□ 0.78
LAMA1-206ENST00000492048 CCER2I3L3R5 266 aa19.91■□□□□ 0.78
LAMA1-206ENST00000492048 WIZO95785 1651 aa19.9■□□□□ 0.78
LAMA1-206ENST00000492048 NOP58Q9Y2X3 529 aaKnown RBP19.9■□□□□ 0.78
LAMA1-206ENST00000492048 CCDC136Q96JN2 1154 aa19.89■□□□□ 0.77
LAMA1-206ENST00000492048 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
LAMA1-206ENST00000492048 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
LAMA1-206ENST00000492048 VPS8Q8N3P4 1428 aa19.83■□□□□ 0.76
LAMA1-206ENST00000492048 SMARCA2P51531 1590 aa19.81■□□□□ 0.76
LAMA1-206ENST00000492048 CUX2O14529 1486 aa19.81■□□□□ 0.76
LAMA1-206ENST00000492048 IL27Q8NEV9 243 aa19.8■□□□□ 0.76
LAMA1-206ENST00000492048 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
LAMA1-206ENST00000492048 SOGA1O94964 1423 aa19.77■□□□□ 0.76
LAMA1-206ENST00000492048 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
LAMA1-206ENST00000492048 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.76
LAMA1-206ENST00000492048 NBR1Q14596 966 aa19.76■□□□□ 0.75
LAMA1-206ENST00000492048 RTL5Q5HYW3 569 aaPredicted RBP19.76■□□□□ 0.75
LAMA1-206ENST00000492048 CLIP1P30622 1438 aa19.76■□□□□ 0.75
LAMA1-206ENST00000492048 UBTFP17480 764 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms