RNA–Protein interactions for RNA: ENST00000489770.1

SETD3-208, Transcript of SET domain containing 3, humanhuman

TSL 5

Gene SETD3, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD3-208ENST00000489770 AEBP2Q6ZN18 517 aaPredicted RBP37.62■■■■□ 3.61
SETD3-208ENST00000489770 CHIC1Q5VXU3 224 aa36.57■■■■□ 3.44
SETD3-208ENST00000489770 PHF23Q9BUL5 403 aaPredicted RBP32.14■■■□□ 2.74
SETD3-208ENST00000489770 SENP3Q9H4L4 574 aaPredicted RBP31.95■■■□□ 2.71
SETD3-208ENST00000489770 FOXD1Q16676 465 aa29.68■■■□□ 2.34
SETD3-208ENST00000489770 PLPPR3Q6T4P5 718 aa29.62■■■□□ 2.33
SETD3-208ENST00000489770 PPP6R1Q9UPN7 881 aa28.43■■■□□ 2.14
SETD3-208ENST00000489770 ADRA2BP18089 450 aa28.41■■■□□ 2.14
SETD3-208ENST00000489770 PIAS4Q8N2W9 510 aaPredicted RBP27.97■■■□□ 2.07
SETD3-208ENST00000489770 MSH5O43196 834 aa27.42■■□□□ 1.98
SETD3-208ENST00000489770 PPP4R3CPQ6ZMV5 832 aa26.09■■□□□ 1.77
SETD3-208ENST00000489770 SCAF1Q9H7N4 1312 aaKnown RBP25.97■■□□□ 1.75
SETD3-208ENST00000489770 MAPK8IP2Q13387 824 aaPredicted RBP25.83■■□□□ 1.73
SETD3-208ENST00000489770 DMRT2Q9Y5R5 561 aa25.47■■□□□ 1.67
SETD3-208ENST00000489770 CNKSR2Q8WXI2 1034 aa25.39■■□□□ 1.66
SETD3-208ENST00000489770 NCBP3Q53F19 620 aaKnown RBP25.36■■□□□ 1.65
SETD3-208ENST00000489770 KCNA4P22459 653 aa25.31■■□□□ 1.64
SETD3-208ENST00000489770 POTEDQ86YR6 584 aa25.28■■□□□ 1.64
SETD3-208ENST00000489770 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
SETD3-208ENST00000489770 NPM3O75607 178 aaKnown RBP24.99■■□□□ 1.59
SETD3-208ENST00000489770 RNF216Q9NWF9 866 aaPredicted RBP24.93■■□□□ 1.58
SETD3-208ENST00000489770 HOXD11P31277 338 aaPredicted RBP24.86■■□□□ 1.57
SETD3-208ENST00000489770 DCAF8L1A6NGE4 600 aa24.45■■□□□ 1.5
SETD3-208ENST00000489770 DNAJC5BQ9UF47 199 aa24.21■■□□□ 1.47
SETD3-208ENST00000489770 SLC4A1APQ9BWU0 796 aaKnown RBP24.07■■□□□ 1.44
SETD3-208ENST00000489770 ABCC9O60706 1549 aa23.89■■□□□ 1.41
SETD3-208ENST00000489770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.74■■□□□ 1.39
SETD3-208ENST00000489770 SLC4A2P04920 1241 aa23.63■■□□□ 1.37
SETD3-208ENST00000489770 RNF39Q9H2S5 420 aa23.48■■□□□ 1.35
SETD3-208ENST00000489770 FOXD4L1Q9NU39 408 aa23.33■■□□□ 1.33
SETD3-208ENST00000489770 U3KPZ7 1027 aaPredicted RBP23.32■■□□□ 1.32
SETD3-208ENST00000489770 ZBTB22O15209 634 aa23.27■■□□□ 1.32
SETD3-208ENST00000489770 EHMT2Q96KQ7 1210 aa23.23■■□□□ 1.31
SETD3-208ENST00000489770 C1QBPQ07021 282 aaKnown RBP23.19■■□□□ 1.3
SETD3-208ENST00000489770 MYCNP04198 464 aaPredicted RBP23.09■■□□□ 1.29
SETD3-208ENST00000489770 CACNB1Q02641 598 aaPredicted RBP23.03■■□□□ 1.28
SETD3-208ENST00000489770 CSRNP3Q8WYN3 585 aa23■■□□□ 1.27
SETD3-208ENST00000489770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
SETD3-208ENST00000489770 HNRNPUL2Q1KMD3 747 aaKnown RBP22.96■■□□□ 1.27
SETD3-208ENST00000489770 SAMD1Q6SPF0 538 aaPredicted RBP22.87■■□□□ 1.25
SETD3-208ENST00000489770 APLP2Q06481 763 aa22.76■■□□□ 1.23
SETD3-208ENST00000489770 SPINK5Q9NQ38 1064 aaPredicted RBP22.74■■□□□ 1.23
SETD3-208ENST00000489770 CCDC180Q9P1Z9 1646 aa22.73■■□□□ 1.23
SETD3-208ENST00000489770 CAPN15O75808 1086 aa22.67■■□□□ 1.22
SETD3-208ENST00000489770 TRHP20396 242 aaPredicted RBP22.52■■□□□ 1.2
SETD3-208ENST00000489770 ATXN8OSP0DMR3 200 aa22.51■■□□□ 1.19
SETD3-208ENST00000489770 ATF5Q9Y2D1 282 aaPredicted RBP22.5■■□□□ 1.19
SETD3-208ENST00000489770 ZNF219Q9P2Y4 722 aaPredicted RBP22.48■■□□□ 1.19
SETD3-208ENST00000489770 DSG3P32926 999 aa22.29■■□□□ 1.16
SETD3-208ENST00000489770 DNAJC5Q9H3Z4 198 aa22.29■■□□□ 1.16
SETD3-208ENST00000489770 ABCB7O75027 752 aa22.23■■□□□ 1.15
SETD3-208ENST00000489770 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
SETD3-208ENST00000489770 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
SETD3-208ENST00000489770 POLA2Q14181 598 aa22.1■■□□□ 1.13
SETD3-208ENST00000489770 NACADO15069 1562 aa21.87■■□□□ 1.09
SETD3-208ENST00000489770 ZBTB12Q9Y330 459 aaPredicted RBP21.7■■□□□ 1.06
SETD3-208ENST00000489770 BICRAQ9NZM4 1560 aa21.66■■□□□ 1.06
SETD3-208ENST00000489770 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
SETD3-208ENST00000489770 DCAF8L2P0C7V8 631 aa21.6■■□□□ 1.05
SETD3-208ENST00000489770 FBLN2P98095 1184 aa21.58■■□□□ 1.05
SETD3-208ENST00000489770 UNC13AQ9UPW8 1703 aa21.51■■□□□ 1.03
SETD3-208ENST00000489770 MKRN4PQ13434 485 aaPredicted RBP21.5■■□□□ 1.03
SETD3-208ENST00000489770 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
SETD3-208ENST00000489770 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
SETD3-208ENST00000489770 MYO15BQ96JP2 1530 aa21.3■■□□□ 1
SETD3-208ENST00000489770 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
SETD3-208ENST00000489770 RBM42Q9BTD8 480 aaKnown RBP21.25■□□□□ 0.99
SETD3-208ENST00000489770 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
SETD3-208ENST00000489770 SPDYE2BA6NHP3 402 aa21.11■□□□□ 0.97
SETD3-208ENST00000489770 SPDYE6P0CI01 402 aa21.11■□□□□ 0.97
SETD3-208ENST00000489770 SPDYE2Q495Y8 402 aa21.11■□□□□ 0.97
SETD3-208ENST00000489770 CUX2O14529 1486 aa21.03■□□□□ 0.96
SETD3-208ENST00000489770 ZNF692Q9BU19 519 aaPredicted RBP21.02■□□□□ 0.96
SETD3-208ENST00000489770 SPDYE4A6NLX3 237 aa20.96■□□□□ 0.95
SETD3-208ENST00000489770 AKT1S1Q96B36 256 aa20.95■□□□□ 0.94
SETD3-208ENST00000489770 SSUH2Q9Y2M2 353 aa20.91■□□□□ 0.94
SETD3-208ENST00000489770 FKBP8Q14318 412 aa20.83■□□□□ 0.93
SETD3-208ENST00000489770 TRIM41Q8WV44 630 aa20.79■□□□□ 0.92
SETD3-208ENST00000489770 REM2Q8IYK8 340 aaPredicted RBP20.76■□□□□ 0.91
SETD3-208ENST00000489770 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
SETD3-208ENST00000489770 ERCC6Q03468 1493 aa20.67■□□□□ 0.9
SETD3-208ENST00000489770 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
SETD3-208ENST00000489770 PROM2Q8N271 834 aa20.54■□□□□ 0.88
SETD3-208ENST00000489770 SPDYE1Q8NFV5 336 aaPredicted RBP20.54■□□□□ 0.88
SETD3-208ENST00000489770 ZCCHC6Q5VYS8 1495 aaKnown RBP20.54■□□□□ 0.88
SETD3-208ENST00000489770 PITPNM1O00562 1244 aa20.53■□□□□ 0.88
SETD3-208ENST00000489770 CLEC11AQ9Y240 323 aa20.48■□□□□ 0.87
SETD3-208ENST00000489770 CHRDL2Q6WN34 429 aa20.44■□□□□ 0.86
SETD3-208ENST00000489770 STAG3Q9UJ98 1225 aa20.34■□□□□ 0.85
SETD3-208ENST00000489770 NCAPD3P42695 1498 aa20.31■□□□□ 0.84
SETD3-208ENST00000489770 PRR29P0C7W0 189 aa20.26■□□□□ 0.83
SETD3-208ENST00000489770 NESP48681 1621 aa20.24■□□□□ 0.83
SETD3-208ENST00000489770 FXR2P51116 673 aaKnown RBP eCLIP20.16■□□□□ 0.82
SETD3-208ENST00000489770 PIP4P2Q8N4L2 257 aa20.15■□□□□ 0.82
SETD3-208ENST00000489770 THOC2Q8NI27 1593 aaKnown RBP20.15■□□□□ 0.82
SETD3-208ENST00000489770 FBXO3Q9UK99 471 aa20.11■□□□□ 0.81
SETD3-208ENST00000489770 ATAD2BQ9ULI0 1458 aa20.08■□□□□ 0.81
SETD3-208ENST00000489770 PRKAR2AP13861 404 aaKnown RBP20.02■□□□□ 0.8
SETD3-208ENST00000489770 CHADLQ6NUI6 762 aa20■□□□□ 0.79
SETD3-208ENST00000489770 POTEHQ6S545 545 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms