RNA–Protein interactions for RNA: ENST00000486464.1

TSC22D1-206, Transcript of TSC22 domain family member 1, humanhuman

TSL 5

Gene TSC22D1, Length 1,093 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-206ENST00000486464 AEBP2Q6ZN18 517 aaPredicted RBP27.05■■□□□ 1.92
TSC22D1-206ENST00000486464 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
TSC22D1-206ENST00000486464 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
TSC22D1-206ENST00000486464 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
TSC22D1-206ENST00000486464 FOXD1Q16676 465 aa21.47■■□□□ 1.03
TSC22D1-206ENST00000486464 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
TSC22D1-206ENST00000486464 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
TSC22D1-206ENST00000486464 ADRA2BP18089 450 aa20.13■□□□□ 0.81
TSC22D1-206ENST00000486464 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
TSC22D1-206ENST00000486464 MSH5O43196 834 aa20.04■□□□□ 0.8
TSC22D1-206ENST00000486464 POTEDQ86YR6 584 aa19.29■□□□□ 0.68
TSC22D1-206ENST00000486464 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
TSC22D1-206ENST00000486464 MAPK8IP2Q13387 824 aaPredicted RBP18.44■□□□□ 0.54
TSC22D1-206ENST00000486464 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
TSC22D1-206ENST00000486464 DMRT2Q9Y5R5 561 aa18.31■□□□□ 0.52
TSC22D1-206ENST00000486464 PPP4R3CPQ6ZMV5 832 aa18.18■□□□□ 0.5
TSC22D1-206ENST00000486464 CNKSR2Q8WXI2 1034 aa17.8■□□□□ 0.44
TSC22D1-206ENST00000486464 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
TSC22D1-206ENST00000486464 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
TSC22D1-206ENST00000486464 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
TSC22D1-206ENST00000486464 DCAF8L1A6NGE4 600 aa17.52■□□□□ 0.4
TSC22D1-206ENST00000486464 NPM3O75607 178 aaKnown RBP17.27■□□□□ 0.36
TSC22D1-206ENST00000486464 RNF39Q9H2S5 420 aa17.11■□□□□ 0.33
TSC22D1-206ENST00000486464 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
TSC22D1-206ENST00000486464 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.32
TSC22D1-206ENST00000486464 KCNA4P22459 653 aa17.07■□□□□ 0.32
TSC22D1-206ENST00000486464 C1QBPQ07021 282 aaKnown RBP16.88■□□□□ 0.29
TSC22D1-206ENST00000486464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
TSC22D1-206ENST00000486464 ABCC9O60706 1549 aa16.65■□□□□ 0.26
TSC22D1-206ENST00000486464 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
TSC22D1-206ENST00000486464 U3KPZ7 1027 aaPredicted RBP16.52■□□□□ 0.24
TSC22D1-206ENST00000486464 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
TSC22D1-206ENST00000486464 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
TSC22D1-206ENST00000486464 CAPN15O75808 1086 aa16.19■□□□□ 0.18
TSC22D1-206ENST00000486464 SLC4A1APQ9BWU0 796 aaKnown RBP16.14■□□□□ 0.17
TSC22D1-206ENST00000486464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.11■□□□□ 0.17
TSC22D1-206ENST00000486464 HNRNPUL2Q1KMD3 747 aaKnown RBP16.11■□□□□ 0.17
TSC22D1-206ENST00000486464 APLP2Q06481 763 aa16.08■□□□□ 0.16
TSC22D1-206ENST00000486464 DSG3P32926 999 aa16.07■□□□□ 0.16
TSC22D1-206ENST00000486464 SAMD1Q6SPF0 538 aaPredicted RBP16.02■□□□□ 0.16
TSC22D1-206ENST00000486464 MYCNP04198 464 aaPredicted RBP15.97■□□□□ 0.15
TSC22D1-206ENST00000486464 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
TSC22D1-206ENST00000486464 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
TSC22D1-206ENST00000486464 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
TSC22D1-206ENST00000486464 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
TSC22D1-206ENST00000486464 ABCB7O75027 752 aa15.82■□□□□ 0.12
TSC22D1-206ENST00000486464 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
TSC22D1-206ENST00000486464 NACADO15069 1562 aa15.71■□□□□ 0.11
TSC22D1-206ENST00000486464 ZBTB22O15209 634 aa15.7■□□□□ 0.1
TSC22D1-206ENST00000486464 POLA2Q14181 598 aa15.58■□□□□ 0.08
TSC22D1-206ENST00000486464 ATF5Q9Y2D1 282 aaPredicted RBP15.58■□□□□ 0.08
TSC22D1-206ENST00000486464 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.08
TSC22D1-206ENST00000486464 UNC13AQ9UPW8 1703 aa15.48■□□□□ 0.07
TSC22D1-206ENST00000486464 MYO15BQ96JP2 1530 aa15.45■□□□□ 0.06
TSC22D1-206ENST00000486464 ATXN8OSP0DMR3 200 aa15.4■□□□□ 0.06
TSC22D1-206ENST00000486464 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
TSC22D1-206ENST00000486464 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
TSC22D1-206ENST00000486464 BICRAQ9NZM4 1560 aa15.32■□□□□ 0.04
TSC22D1-206ENST00000486464 ZBTB12Q9Y330 459 aaPredicted RBP15.28■□□□□ 0.04
TSC22D1-206ENST00000486464 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.04
TSC22D1-206ENST00000486464 SCRIBQ14160 1630 aa15.21■□□□□ 0.02
TSC22D1-206ENST00000486464 POTEHQ6S545 545 aa15.14■□□□□ 0.01
TSC22D1-206ENST00000486464 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
TSC22D1-206ENST00000486464 SHROOM4Q9ULL8 1493 aa15.1■□□□□ 0.01
TSC22D1-206ENST00000486464 OSCARQ8IYS5 282 aa15.06■□□□□ 0
TSC22D1-206ENST00000486464 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
TSC22D1-206ENST00000486464 AKT1S1Q96B36 256 aa15.02■□□□□ -0
TSC22D1-206ENST00000486464 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
TSC22D1-206ENST00000486464 CECR2Q9BXF3 1484 aa14.97□□□□□ -0.01
TSC22D1-206ENST00000486464 FBLN2P98095 1184 aa14.97□□□□□ -0.01
TSC22D1-206ENST00000486464 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
TSC22D1-206ENST00000486464 CHRDL2Q6WN34 429 aa14.93□□□□□ -0.02
TSC22D1-206ENST00000486464 MKRN4PQ13434 485 aaPredicted RBP14.88□□□□□ -0.03
TSC22D1-206ENST00000486464 REM2Q8IYK8 340 aaPredicted RBP14.87□□□□□ -0.03
TSC22D1-206ENST00000486464 SPDYE2BA6NHP3 402 aa14.82□□□□□ -0.04
TSC22D1-206ENST00000486464 SPDYE6P0CI01 402 aa14.82□□□□□ -0.04
TSC22D1-206ENST00000486464 SPDYE2Q495Y8 402 aa14.82□□□□□ -0.04
TSC22D1-206ENST00000486464 PITPNM1O00562 1244 aa14.7□□□□□ -0.06
TSC22D1-206ENST00000486464 ZNF692Q9BU19 519 aaPredicted RBP14.67□□□□□ -0.06
TSC22D1-206ENST00000486464 SSUH2Q9Y2M2 353 aa14.65□□□□□ -0.06
TSC22D1-206ENST00000486464 PIP4P2Q8N4L2 257 aa14.6□□□□□ -0.07
TSC22D1-206ENST00000486464 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.08
TSC22D1-206ENST00000486464 SPDYE1Q8NFV5 336 aaPredicted RBP14.53□□□□□ -0.08
TSC22D1-206ENST00000486464 CLEC11AQ9Y240 323 aa14.48□□□□□ -0.09
TSC22D1-206ENST00000486464 NCAPD3P42695 1498 aa14.48□□□□□ -0.09
TSC22D1-206ENST00000486464 SMARCA4P51532 1647 aa14.47□□□□□ -0.09
TSC22D1-206ENST00000486464 ATAD2BQ9ULI0 1458 aa14.46□□□□□ -0.09
TSC22D1-206ENST00000486464 SMARCA2P51531 1590 aa14.44□□□□□ -0.1
TSC22D1-206ENST00000486464 ERCC6Q03468 1493 aa14.41□□□□□ -0.1
TSC22D1-206ENST00000486464 BAZ1AQ9NRL2 1556 aaPredicted RBP14.41□□□□□ -0.1
TSC22D1-206ENST00000486464 HMGXB3Q12766 1538 aa14.39□□□□□ -0.11
TSC22D1-206ENST00000486464 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
TSC22D1-206ENST00000486464 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
TSC22D1-206ENST00000486464 HAX1O00165 279 aa14.3□□□□□ -0.12
TSC22D1-206ENST00000486464 CUX2O14529 1486 aa14.3□□□□□ -0.12
TSC22D1-206ENST00000486464 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
TSC22D1-206ENST00000486464 NESP48681 1621 aa14.29□□□□□ -0.12
TSC22D1-206ENST00000486464 PEG3Q9GZU2 1588 aa14.28□□□□□ -0.12
TSC22D1-206ENST00000486464 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
TSC22D1-206ENST00000486464 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms