RNA–Protein interactions for RNA: ENST00000486357.1

APOBEC3G-206, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3G, humanhuman

TSL 4

Gene APOBEC3G, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3G-206ENST00000486357 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
APOBEC3G-206ENST00000486357 AEBP2Q6ZN18 517 aaPredicted RBP21.59■■□□□ 1.05
APOBEC3G-206ENST00000486357 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
APOBEC3G-206ENST00000486357 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
APOBEC3G-206ENST00000486357 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
APOBEC3G-206ENST00000486357 NISCHQ9Y2I1 1504 aa17.58■□□□□ 0.41
APOBEC3G-206ENST00000486357 ADRA2BP18089 450 aa17.09■□□□□ 0.33
APOBEC3G-206ENST00000486357 KCNA4P22459 653 aa16.9■□□□□ 0.3
APOBEC3G-206ENST00000486357 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
APOBEC3G-206ENST00000486357 EHMT2Q96KQ7 1210 aa16.81■□□□□ 0.28
APOBEC3G-206ENST00000486357 FOXD1Q16676 465 aa16.7■□□□□ 0.26
APOBEC3G-206ENST00000486357 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
APOBEC3G-206ENST00000486357 ABCC9O60706 1549 aa16.19■□□□□ 0.18
APOBEC3G-206ENST00000486357 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
APOBEC3G-206ENST00000486357 PPP4R3CPQ6ZMV5 832 aa16.15■□□□□ 0.18
APOBEC3G-206ENST00000486357 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
APOBEC3G-206ENST00000486357 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
APOBEC3G-206ENST00000486357 NPM3O75607 178 aaKnown RBP15.8■□□□□ 0.12
APOBEC3G-206ENST00000486357 CCDC180Q9P1Z9 1646 aa15.79■□□□□ 0.12
APOBEC3G-206ENST00000486357 ZBTB22O15209 634 aa15.64■□□□□ 0.09
APOBEC3G-206ENST00000486357 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.07
APOBEC3G-206ENST00000486357 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
APOBEC3G-206ENST00000486357 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
APOBEC3G-206ENST00000486357 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
APOBEC3G-206ENST00000486357 DCAF8L2P0C7V8 631 aa15.21■□□□□ 0.03
APOBEC3G-206ENST00000486357 FOXD4L1Q9NU39 408 aa15.21■□□□□ 0.03
APOBEC3G-206ENST00000486357 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
APOBEC3G-206ENST00000486357 NACADO15069 1562 aa15.06■□□□□ 0
APOBEC3G-206ENST00000486357 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
APOBEC3G-206ENST00000486357 SLC24A1O60721 1099 aa15.01□□□□□ -0.01
APOBEC3G-206ENST00000486357 RTN4Q9NQC3 1192 aaKnown RBP15□□□□□ -0.01
APOBEC3G-206ENST00000486357 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
APOBEC3G-206ENST00000486357 MSH5O43196 834 aa14.92□□□□□ -0.02
APOBEC3G-206ENST00000486357 AMER1Q5JTC6 1135 aaPredicted RBP14.9□□□□□ -0.02
APOBEC3G-206ENST00000486357 UNC13AQ9UPW8 1703 aa14.78□□□□□ -0.04
APOBEC3G-206ENST00000486357 BICRAQ9NZM4 1560 aa14.74□□□□□ -0.05
APOBEC3G-206ENST00000486357 SLC4A2P04920 1241 aa14.74□□□□□ -0.05
APOBEC3G-206ENST00000486357 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.05
APOBEC3G-206ENST00000486357 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
APOBEC3G-206ENST00000486357 ATXN8OSP0DMR3 200 aa14.6□□□□□ -0.07
APOBEC3G-206ENST00000486357 CECR2Q9BXF3 1484 aa14.59□□□□□ -0.07
APOBEC3G-206ENST00000486357 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
APOBEC3G-206ENST00000486357 FKBP8Q14318 412 aa14.56□□□□□ -0.08
APOBEC3G-206ENST00000486357 CC2D2AQ9P2K1 1620 aa14.54□□□□□ -0.08
APOBEC3G-206ENST00000486357 MYCNP04198 464 aaPredicted RBP14.51□□□□□ -0.09
APOBEC3G-206ENST00000486357 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
APOBEC3G-206ENST00000486357 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
APOBEC3G-206ENST00000486357 SCRIBQ14160 1630 aa14.48□□□□□ -0.09
APOBEC3G-206ENST00000486357 DCAF1Q9Y4B6 1507 aa14.45□□□□□ -0.1
APOBEC3G-206ENST00000486357 EIF4G1Q04637 1599 aaKnown RBP14.44□□□□□ -0.1
APOBEC3G-206ENST00000486357 DNAJC5Q9H3Z4 198 aa14.33□□□□□ -0.12
APOBEC3G-206ENST00000486357 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
APOBEC3G-206ENST00000486357 ERCC6Q03468 1493 aa14.03□□□□□ -0.16
APOBEC3G-206ENST00000486357 CUX2O14529 1486 aa13.99□□□□□ -0.17
APOBEC3G-206ENST00000486357 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
APOBEC3G-206ENST00000486357 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
APOBEC3G-206ENST00000486357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.87□□□□□ -0.19
APOBEC3G-206ENST00000486357 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
APOBEC3G-206ENST00000486357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.86□□□□□ -0.19
APOBEC3G-206ENST00000486357 HNRNPUL2Q1KMD3 747 aaKnown RBP13.86□□□□□ -0.19
APOBEC3G-206ENST00000486357 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
APOBEC3G-206ENST00000486357 NESP48681 1621 aa13.81□□□□□ -0.2
APOBEC3G-206ENST00000486357 SMARCA2P51531 1590 aa13.79□□□□□ -0.2
APOBEC3G-206ENST00000486357 DCAF8L1A6NGE4 600 aa13.78□□□□□ -0.2
APOBEC3G-206ENST00000486357 PLCB2Q00722 1185 aa13.76□□□□□ -0.21
APOBEC3G-206ENST00000486357 HMGXB3Q12766 1538 aa13.75□□□□□ -0.21
APOBEC3G-206ENST00000486357 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
APOBEC3G-206ENST00000486357 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
APOBEC3G-206ENST00000486357 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
APOBEC3G-206ENST00000486357 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
APOBEC3G-206ENST00000486357 FBXO3Q9UK99 471 aa13.71□□□□□ -0.21
APOBEC3G-206ENST00000486357 PROM2Q8N271 834 aa13.68□□□□□ -0.22
APOBEC3G-206ENST00000486357 BAZ1AQ9NRL2 1556 aaPredicted RBP13.66□□□□□ -0.22
APOBEC3G-206ENST00000486357 SPDYE4A6NLX3 237 aa13.64□□□□□ -0.23
APOBEC3G-206ENST00000486357 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
APOBEC3G-206ENST00000486357 THOC2Q8NI27 1593 aaKnown RBP13.62□□□□□ -0.23
APOBEC3G-206ENST00000486357 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
APOBEC3G-206ENST00000486357 MKRN4PQ13434 485 aaPredicted RBP13.61□□□□□ -0.23
APOBEC3G-206ENST00000486357 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
APOBEC3G-206ENST00000486357 MROH2BQ7Z745 1585 aa13.56□□□□□ -0.24
APOBEC3G-206ENST00000486357 PEG3Q9GZU2 1588 aa13.56□□□□□ -0.24
APOBEC3G-206ENST00000486357 KIF21AQ7Z4S6 1674 aa13.54□□□□□ -0.24
APOBEC3G-206ENST00000486357 CADPSQ9ULU8 1353 aa13.54□□□□□ -0.24
APOBEC3G-206ENST00000486357 IFNLR1Q8IU57 520 aaPredicted RBP13.52□□□□□ -0.25
APOBEC3G-206ENST00000486357 MRC2Q9UBG0 1479 aa13.49□□□□□ -0.25
APOBEC3G-206ENST00000486357 HAP1P54257 671 aaPredicted RBP13.49□□□□□ -0.25
APOBEC3G-206ENST00000486357 PKD2Q13563 968 aa13.46□□□□□ -0.25
APOBEC3G-206ENST00000486357 APLP2Q06481 763 aa13.45□□□□□ -0.26
APOBEC3G-206ENST00000486357 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
APOBEC3G-206ENST00000486357 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
APOBEC3G-206ENST00000486357 WDR62O43379 1518 aa13.41□□□□□ -0.26
APOBEC3G-206ENST00000486357 BCANQ96GW7 911 aa13.39□□□□□ -0.27
APOBEC3G-206ENST00000486357 WIZO95785 1651 aa13.37□□□□□ -0.27
APOBEC3G-206ENST00000486357 FANCD2Q9BXW9 1451 aa13.37□□□□□ -0.27
APOBEC3G-206ENST00000486357 PRKCSHP14314 528 aaPredicted RBP13.37□□□□□ -0.27
APOBEC3G-206ENST00000486357 VSIG10Q8N0Z9 540 aa13.36□□□□□ -0.27
APOBEC3G-206ENST00000486357 FBLN2P98095 1184 aa13.33□□□□□ -0.28
APOBEC3G-206ENST00000486357 TAOK2Q9UL54 1235 aa13.3□□□□□ -0.28
APOBEC3G-206ENST00000486357 CFTRP13569 1480 aa13.29□□□□□ -0.28
APOBEC3G-206ENST00000486357 POTEDQ86YR6 584 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms