RNA–Protein interactions for RNA: ENST00000485005.1

NIN-212, Transcript of ninein, humanhuman

TSL 1 (best)

Gene NIN, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-212ENST00000485005 AEBP2Q6ZN18 517 aaPredicted RBP26.2■■□□□ 1.78
NIN-212ENST00000485005 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
NIN-212ENST00000485005 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
NIN-212ENST00000485005 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
NIN-212ENST00000485005 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
NIN-212ENST00000485005 FOXD1Q16676 465 aa20.53■□□□□ 0.88
NIN-212ENST00000485005 ADRA2BP18089 450 aa20.09■□□□□ 0.81
NIN-212ENST00000485005 PPP6R1Q9UPN7 881 aa20.07■□□□□ 0.8
NIN-212ENST00000485005 PIAS4Q8N2W9 510 aaPredicted RBP19.47■□□□□ 0.71
NIN-212ENST00000485005 PPP4R3CPQ6ZMV5 832 aa18.77■□□□□ 0.6
NIN-212ENST00000485005 MSH5O43196 834 aa18.75■□□□□ 0.59
NIN-212ENST00000485005 KCNA4P22459 653 aa18.75■□□□□ 0.59
NIN-212ENST00000485005 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
NIN-212ENST00000485005 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
NIN-212ENST00000485005 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
NIN-212ENST00000485005 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
NIN-212ENST00000485005 MAPK8IP2Q13387 824 aaPredicted RBP18.13■□□□□ 0.49
NIN-212ENST00000485005 NPM3O75607 178 aaKnown RBP18.1■□□□□ 0.49
NIN-212ENST00000485005 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
NIN-212ENST00000485005 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
NIN-212ENST00000485005 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
NIN-212ENST00000485005 RNF216Q9NWF9 866 aaPredicted RBP17.68■□□□□ 0.42
NIN-212ENST00000485005 HOXD11P31277 338 aaPredicted RBP17.5■□□□□ 0.39
NIN-212ENST00000485005 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
NIN-212ENST00000485005 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
NIN-212ENST00000485005 ZBTB22O15209 634 aa17.26■□□□□ 0.35
NIN-212ENST00000485005 FOXD4L1Q9NU39 408 aa17.13■□□□□ 0.33
NIN-212ENST00000485005 DCAF8L1A6NGE4 600 aa17.04■□□□□ 0.32
NIN-212ENST00000485005 SLC4A2P04920 1241 aa17.01■□□□□ 0.31
NIN-212ENST00000485005 ABCC9O60706 1549 aa16.95■□□□□ 0.3
NIN-212ENST00000485005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.27
NIN-212ENST00000485005 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
NIN-212ENST00000485005 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
NIN-212ENST00000485005 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
NIN-212ENST00000485005 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
NIN-212ENST00000485005 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
NIN-212ENST00000485005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.37■□□□□ 0.21
NIN-212ENST00000485005 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
NIN-212ENST00000485005 SAMD1Q6SPF0 538 aaPredicted RBP16.33■□□□□ 0.2
NIN-212ENST00000485005 ATF5Q9Y2D1 282 aaPredicted RBP16.27■□□□□ 0.2
NIN-212ENST00000485005 RNF39Q9H2S5 420 aa16.12■□□□□ 0.17
NIN-212ENST00000485005 APLP2Q06481 763 aa16.1■□□□□ 0.17
NIN-212ENST00000485005 RB1CC1Q8TDY2 1594 aa15.99■□□□□ 0.15
NIN-212ENST00000485005 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
NIN-212ENST00000485005 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
NIN-212ENST00000485005 DCAF8L2P0C7V8 631 aa15.93■□□□□ 0.14
NIN-212ENST00000485005 C1QBPQ07021 282 aaKnown RBP15.93■□□□□ 0.14
NIN-212ENST00000485005 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
NIN-212ENST00000485005 CAPN15O75808 1086 aa15.87■□□□□ 0.13
NIN-212ENST00000485005 NACADO15069 1562 aa15.85■□□□□ 0.13
NIN-212ENST00000485005 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
NIN-212ENST00000485005 FKBP8Q14318 412 aa15.79■□□□□ 0.12
NIN-212ENST00000485005 POLA2Q14181 598 aa15.7■□□□□ 0.1
NIN-212ENST00000485005 ABCB7O75027 752 aa15.62■□□□□ 0.09
NIN-212ENST00000485005 MYO15BQ96JP2 1530 aa15.58■□□□□ 0.08
NIN-212ENST00000485005 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
NIN-212ENST00000485005 FBLN2P98095 1184 aa15.54■□□□□ 0.08
NIN-212ENST00000485005 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
NIN-212ENST00000485005 UNC13AQ9UPW8 1703 aa15.51■□□□□ 0.07
NIN-212ENST00000485005 DSG3P32926 999 aa15.48■□□□□ 0.07
NIN-212ENST00000485005 CACNB1Q02641 598 aaPredicted RBP15.48■□□□□ 0.07
NIN-212ENST00000485005 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
NIN-212ENST00000485005 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
NIN-212ENST00000485005 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
NIN-212ENST00000485005 DCAF1Q9Y4B6 1507 aa15.32■□□□□ 0.04
NIN-212ENST00000485005 CECR2Q9BXF3 1484 aa15.28■□□□□ 0.04
NIN-212ENST00000485005 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.04
NIN-212ENST00000485005 CC2D2AQ9P2K1 1620 aa15.24■□□□□ 0.03
NIN-212ENST00000485005 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
NIN-212ENST00000485005 EIF4G1Q04637 1599 aaKnown RBP15.16■□□□□ 0.02
NIN-212ENST00000485005 OSCARQ8IYS5 282 aa15.15■□□□□ 0.02
NIN-212ENST00000485005 PROM2Q8N271 834 aa15.13■□□□□ 0.01
NIN-212ENST00000485005 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0
NIN-212ENST00000485005 FBXO3Q9UK99 471 aa15.08■□□□□ 0
NIN-212ENST00000485005 SPDYE2BA6NHP3 402 aa15.04■□□□□ -0
NIN-212ENST00000485005 SPDYE6P0CI01 402 aa15.04■□□□□ -0
NIN-212ENST00000485005 SPDYE2Q495Y8 402 aa15.04■□□□□ -0
NIN-212ENST00000485005 RTN4Q9NQC3 1192 aaKnown RBP15.01□□□□□ -0.01
NIN-212ENST00000485005 AMER1Q5JTC6 1135 aaPredicted RBP14.99□□□□□ -0.01
NIN-212ENST00000485005 SSUH2Q9Y2M2 353 aa14.95□□□□□ -0.02
NIN-212ENST00000485005 DNAJC5Q9H3Z4 198 aa14.93□□□□□ -0.02
NIN-212ENST00000485005 VASPP50552 380 aaPredicted RBP14.88□□□□□ -0.03
NIN-212ENST00000485005 IFNLR1Q8IU57 520 aaPredicted RBP14.72□□□□□ -0.05
NIN-212ENST00000485005 RBM42Q9BTD8 480 aaKnown RBP14.72□□□□□ -0.05
NIN-212ENST00000485005 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
NIN-212ENST00000485005 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
NIN-212ENST00000485005 CUX2O14529 1486 aa14.63□□□□□ -0.07
NIN-212ENST00000485005 ERCC6Q03468 1493 aa14.63□□□□□ -0.07
NIN-212ENST00000485005 AKT1S1Q96B36 256 aa14.62□□□□□ -0.07
NIN-212ENST00000485005 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
NIN-212ENST00000485005 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
NIN-212ENST00000485005 MIER1Q8N108 512 aa14.59□□□□□ -0.07
NIN-212ENST00000485005 KLHL34Q8N239 644 aa14.59□□□□□ -0.07
NIN-212ENST00000485005 SMARCA2P51531 1590 aa14.51□□□□□ -0.09
NIN-212ENST00000485005 REM2Q8IYK8 340 aaPredicted RBP14.51□□□□□ -0.09
NIN-212ENST00000485005 SPDYE1Q8NFV5 336 aaPredicted RBP14.51□□□□□ -0.09
NIN-212ENST00000485005 NESP48681 1621 aa14.51□□□□□ -0.09
NIN-212ENST00000485005 CLEC11AQ9Y240 323 aa14.5□□□□□ -0.09
NIN-212ENST00000485005 HMGXB3Q12766 1538 aa14.49□□□□□ -0.09
NIN-212ENST00000485005 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms