RNA–Protein interactions for RNA: ENST00000484483.1

PTP4A2-205, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 651 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-205ENST00000484483 AEBP2Q6ZN18 517 aaPredicted RBP17.93■□□□□ 0.46
PTP4A2-205ENST00000484483 CHIC1Q5VXU3 224 aa17.63■□□□□ 0.41
PTP4A2-205ENST00000484483 PHF23Q9BUL5 403 aaPredicted RBP15.58■□□□□ 0.08
PTP4A2-205ENST00000484483 SENP3Q9H4L4 574 aaPredicted RBP15.09■□□□□ 0.01
PTP4A2-205ENST00000484483 PLPPR3Q6T4P5 718 aa14.37□□□□□ -0.11
PTP4A2-205ENST00000484483 FOXD1Q16676 465 aa14.05□□□□□ -0.16
PTP4A2-205ENST00000484483 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
PTP4A2-205ENST00000484483 ADRA2BP18089 450 aa13.7□□□□□ -0.22
PTP4A2-205ENST00000484483 NISCHQ9Y2I1 1504 aa13.39□□□□□ -0.27
PTP4A2-205ENST00000484483 PIAS4Q8N2W9 510 aaPredicted RBP13.27□□□□□ -0.29
PTP4A2-205ENST00000484483 MSH5O43196 834 aa12.8□□□□□ -0.36
PTP4A2-205ENST00000484483 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
PTP4A2-205ENST00000484483 KCNA4P22459 653 aa12.68□□□□□ -0.38
PTP4A2-205ENST00000484483 SCAF1Q9H7N4 1312 aaKnown RBP12.42□□□□□ -0.42
PTP4A2-205ENST00000484483 MAPK8IP2Q13387 824 aaPredicted RBP12.41□□□□□ -0.42
PTP4A2-205ENST00000484483 NCBP3Q53F19 620 aaKnown RBP12.39□□□□□ -0.43
PTP4A2-205ENST00000484483 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
PTP4A2-205ENST00000484483 NPM3O75607 178 aaKnown RBP12.28□□□□□ -0.44
PTP4A2-205ENST00000484483 DMRT2Q9Y5R5 561 aa12.09□□□□□ -0.47
PTP4A2-205ENST00000484483 SLC4A1APQ9BWU0 796 aaKnown RBP12.07□□□□□ -0.48
PTP4A2-205ENST00000484483 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
PTP4A2-205ENST00000484483 EHMT2Q96KQ7 1210 aa12□□□□□ -0.49
PTP4A2-205ENST00000484483 HOXD11P31277 338 aaPredicted RBP11.91□□□□□ -0.5
PTP4A2-205ENST00000484483 DNAJC5BQ9UF47 199 aa11.8□□□□□ -0.52
PTP4A2-205ENST00000484483 CSRNP3Q8WYN3 585 aa11.77□□□□□ -0.53
PTP4A2-205ENST00000484483 CCDC180Q9P1Z9 1646 aa11.74□□□□□ -0.53
PTP4A2-205ENST00000484483 ZBTB22O15209 634 aa11.69□□□□□ -0.54
PTP4A2-205ENST00000484483 ABCC9O60706 1549 aa11.63□□□□□ -0.55
PTP4A2-205ENST00000484483 DCAF8L1A6NGE4 600 aa11.61□□□□□ -0.55
PTP4A2-205ENST00000484483 SLC4A2P04920 1241 aa11.57□□□□□ -0.56
PTP4A2-205ENST00000484483 FOXD4L1Q9NU39 408 aa11.56□□□□□ -0.56
PTP4A2-205ENST00000484483 POTEDQ86YR6 584 aa11.4□□□□□ -0.58
PTP4A2-205ENST00000484483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTP4A2-205ENST00000484483 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
PTP4A2-205ENST00000484483 MYCNP04198 464 aaPredicted RBP11.29□□□□□ -0.6
PTP4A2-205ENST00000484483 U3KPZ7 1027 aaPredicted RBP11.23□□□□□ -0.61
PTP4A2-205ENST00000484483 NACADO15069 1562 aa11.14□□□□□ -0.63
PTP4A2-205ENST00000484483 ZCCHC6Q5VYS8 1495 aaKnown RBP11.12□□□□□ -0.63
PTP4A2-205ENST00000484483 RB1CC1Q8TDY2 1594 aa11.12□□□□□ -0.63
PTP4A2-205ENST00000484483 MYO15BQ96JP2 1530 aa11.09□□□□□ -0.63
PTP4A2-205ENST00000484483 ATXN8OSP0DMR3 200 aa11.09□□□□□ -0.63
PTP4A2-205ENST00000484483 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
PTP4A2-205ENST00000484483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.05□□□□□ -0.64
PTP4A2-205ENST00000484483 HNRNPUL2Q1KMD3 747 aaKnown RBP11.05□□□□□ -0.64
PTP4A2-205ENST00000484483 SAMD1Q6SPF0 538 aaPredicted RBP11.05□□□□□ -0.64
PTP4A2-205ENST00000484483 DCAF1Q9Y4B6 1507 aa11.04□□□□□ -0.64
PTP4A2-205ENST00000484483 RNF39Q9H2S5 420 aa11.02□□□□□ -0.65
PTP4A2-205ENST00000484483 PABPN1Q86U42 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
PTP4A2-205ENST00000484483 SPINK5Q9NQ38 1064 aaPredicted RBP10.89□□□□□ -0.67
PTP4A2-205ENST00000484483 C1QBPQ07021 282 aaKnown RBP10.88□□□□□ -0.67
PTP4A2-205ENST00000484483 APLP2Q06481 763 aa10.87□□□□□ -0.67
PTP4A2-205ENST00000484483 TRHP20396 242 aaPredicted RBP10.82□□□□□ -0.68
PTP4A2-205ENST00000484483 ZNF219Q9P2Y4 722 aaPredicted RBP10.82□□□□□ -0.68
PTP4A2-205ENST00000484483 CAPN15O75808 1086 aa10.8□□□□□ -0.68
PTP4A2-205ENST00000484483 BICRAQ9NZM4 1560 aa10.78□□□□□ -0.68
PTP4A2-205ENST00000484483 SCRIBQ14160 1630 aa10.78□□□□□ -0.68
PTP4A2-205ENST00000484483 UNC13AQ9UPW8 1703 aa10.72□□□□□ -0.69
PTP4A2-205ENST00000484483 POLA2Q14181 598 aa10.68□□□□□ -0.7
PTP4A2-205ENST00000484483 SHROOM4Q9ULL8 1493 aa10.68□□□□□ -0.7
PTP4A2-205ENST00000484483 ABCB7O75027 752 aa10.65□□□□□ -0.7
PTP4A2-205ENST00000484483 CACNB1Q02641 598 aaPredicted RBP10.62□□□□□ -0.71
PTP4A2-205ENST00000484483 FKBP8Q14318 412 aa10.61□□□□□ -0.71
PTP4A2-205ENST00000484483 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
PTP4A2-205ENST00000484483 DSG3P32926 999 aa10.57□□□□□ -0.72
PTP4A2-205ENST00000484483 EIF4G1Q04637 1599 aaKnown RBP10.51□□□□□ -0.73
PTP4A2-205ENST00000484483 FBLN2P98095 1184 aa10.5□□□□□ -0.73
PTP4A2-205ENST00000484483 CECR2Q9BXF3 1484 aa10.46□□□□□ -0.74
PTP4A2-205ENST00000484483 CC2D2AQ9P2K1 1620 aa10.45□□□□□ -0.74
PTP4A2-205ENST00000484483 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
PTP4A2-205ENST00000484483 SPDYE4A6NLX3 237 aa10.4□□□□□ -0.74
PTP4A2-205ENST00000484483 NCAPD3P42695 1498 aa10.35□□□□□ -0.75
PTP4A2-205ENST00000484483 ATAD2BQ9ULI0 1458 aa10.35□□□□□ -0.75
PTP4A2-205ENST00000484483 BAZ1AQ9NRL2 1556 aaPredicted RBP10.35□□□□□ -0.75
PTP4A2-205ENST00000484483 MROH2BQ7Z745 1585 aa10.32□□□□□ -0.76
PTP4A2-205ENST00000484483 SMARCA4P51532 1647 aa10.3□□□□□ -0.76
PTP4A2-205ENST00000484483 OSCARQ8IYS5 282 aa10.3□□□□□ -0.76
PTP4A2-205ENST00000484483 SMARCA2P51531 1590 aa10.27□□□□□ -0.76
PTP4A2-205ENST00000484483 RSF1Q96T23 1441 aaPredicted RBP10.26□□□□□ -0.77
PTP4A2-205ENST00000484483 BAZ1BQ9UIG0 1483 aaKnown RBP10.23□□□□□ -0.77
PTP4A2-205ENST00000484483 PROM2Q8N271 834 aa10.23□□□□□ -0.77
PTP4A2-205ENST00000484483 ZNF692Q9BU19 519 aaPredicted RBP10.22□□□□□ -0.77
PTP4A2-205ENST00000484483 PEG3Q9GZU2 1588 aa10.22□□□□□ -0.77
PTP4A2-205ENST00000484483 HMGXB3Q12766 1538 aa10.2□□□□□ -0.78
PTP4A2-205ENST00000484483 SPDYE2BA6NHP3 402 aa10.19□□□□□ -0.78
PTP4A2-205ENST00000484483 SPDYE6P0CI01 402 aa10.19□□□□□ -0.78
PTP4A2-205ENST00000484483 SPDYE2Q495Y8 402 aa10.19□□□□□ -0.78
PTP4A2-205ENST00000484483 SSUH2Q9Y2M2 353 aa10.15□□□□□ -0.78
PTP4A2-205ENST00000484483 WIZO95785 1651 aa10.14□□□□□ -0.79
PTP4A2-205ENST00000484483 SUPT5HO00267 1087 aaKnown RBP10.11□□□□□ -0.79
PTP4A2-205ENST00000484483 FBXO3Q9UK99 471 aa10.1□□□□□ -0.79
PTP4A2-205ENST00000484483 CADPSQ9ULU8 1353 aa10.08□□□□□ -0.8
PTP4A2-205ENST00000484483 NESP48681 1621 aa10.06□□□□□ -0.8
PTP4A2-205ENST00000484483 TOP2AP11388 1531 aaKnown RBP10.06□□□□□ -0.8
PTP4A2-205ENST00000484483 CCDC88BA6NC98 1476 aa10.02□□□□□ -0.81
PTP4A2-205ENST00000484483 ERCC6Q03468 1493 aa10.02□□□□□ -0.81
PTP4A2-205ENST00000484483 PDS5BQ9NTI5 1447 aa10.01□□□□□ -0.81
PTP4A2-205ENST00000484483 VASPP50552 380 aaPredicted RBP10□□□□□ -0.81
PTP4A2-205ENST00000484483 RBM42Q9BTD8 480 aaKnown RBP10□□□□□ -0.81
PTP4A2-205ENST00000484483 RTN4Q9NQC3 1192 aaKnown RBP10□□□□□ -0.81
PTP4A2-205ENST00000484483 CFTRP13569 1480 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms