RNA–Protein interactions for RNA: ENST00000482885.1

SCHIP1-206, Transcript of schwannomin interacting protein 1, humanhuman

TSL 2

Gene SCHIP1, Length 5,949 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCHIP1-206ENST00000482885 DCAF8L2P0C7V8 631 aa22.46■■□□□ 1.19
SCHIP1-206ENST00000482885 SUPT5HO00267 1087 aaKnown RBP21.18■□□□□ 0.98
SCHIP1-206ENST00000482885 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
SCHIP1-206ENST00000482885 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
SCHIP1-206ENST00000482885 PELP1Q8IZL8 1130 aaKnown RBP20.57■□□□□ 0.88
SCHIP1-206ENST00000482885 APLP2Q06481 763 aa20.54■□□□□ 0.88
SCHIP1-206ENST00000482885 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
SCHIP1-206ENST00000482885 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
SCHIP1-206ENST00000482885 TTBK1Q5TCY1 1321 aaPredicted RBP19.77■□□□□ 0.76
SCHIP1-206ENST00000482885 TRIM41Q8WV44 630 aa19.74■□□□□ 0.75
SCHIP1-206ENST00000482885 ZEB1P37275 1124 aaPredicted RBP19.73■□□□□ 0.75
SCHIP1-206ENST00000482885 PCGF6Q9BYE7 350 aa19.7■□□□□ 0.74
SCHIP1-206ENST00000482885 ATP1B4Q9UN42 357 aaPredicted RBP19.67■□□□□ 0.74
SCHIP1-206ENST00000482885 RANGAP1P46060 587 aaPredicted RBP19.66■□□□□ 0.74
SCHIP1-206ENST00000482885 CCER1Q8TC90 406 aaPredicted RBP19.66■□□□□ 0.74
SCHIP1-206ENST00000482885 CENPBP07199 599 aaPredicted RBP19.65■□□□□ 0.74
SCHIP1-206ENST00000482885 ERICH6Q7L0X2 663 aa19.57■□□□□ 0.72
SCHIP1-206ENST00000482885 UBTFP17480 764 aaKnown RBP19.57■□□□□ 0.72
SCHIP1-206ENST00000482885 NEFLP07196 543 aa19.35■□□□□ 0.69
SCHIP1-206ENST00000482885 MYT1LQ9UL68 1186 aa19.08■□□□□ 0.64
SCHIP1-206ENST00000482885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.04■□□□□ 0.64
SCHIP1-206ENST00000482885 HNRNPUL2Q1KMD3 747 aaKnown RBP19.04■□□□□ 0.64
SCHIP1-206ENST00000482885 YTHDC1Q96MU7 727 aaKnown RBP19■□□□□ 0.63
SCHIP1-206ENST00000482885 TRIM26Q12899 539 aaPredicted RBP18.98■□□□□ 0.63
SCHIP1-206ENST00000482885 PPARGC1BQ86YN6 1023 aaKnown RBP18.9■□□□□ 0.62
SCHIP1-206ENST00000482885 MYT1Q01538 1121 aa18.87■□□□□ 0.61
SCHIP1-206ENST00000482885 ITGAEP38570 1179 aa18.87■□□□□ 0.61
SCHIP1-206ENST00000482885 DAXXQ9UER7 740 aaPredicted RBP18.85■□□□□ 0.61
SCHIP1-206ENST00000482885 POLR3GLQ9BT43 218 aa18.83■□□□□ 0.61
SCHIP1-206ENST00000482885 HRCP23327 699 aa18.64■□□□□ 0.57
SCHIP1-206ENST00000482885 CHIC1Q5VXU3 224 aa18.61■□□□□ 0.57
SCHIP1-206ENST00000482885 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
SCHIP1-206ENST00000482885 LOC105371045A0A1W2PR82 267 aa18.55■□□□□ 0.56
SCHIP1-206ENST00000482885 CNGB1Q14028 1251 aaPredicted RBP18.49■□□□□ 0.55
SCHIP1-206ENST00000482885 FAM50AQ14320 339 aaKnown RBP18.47■□□□□ 0.55
SCHIP1-206ENST00000482885 TRIM52Q96A61 297 aa18.43■□□□□ 0.54
SCHIP1-206ENST00000482885 CLSPNQ9HAW4 1339 aa18.41■□□□□ 0.54
SCHIP1-206ENST00000482885 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
SCHIP1-206ENST00000482885 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
SCHIP1-206ENST00000482885 ABCC9O60706 1549 aa18.34■□□□□ 0.53
SCHIP1-206ENST00000482885 RTL5Q5HYW3 569 aaPredicted RBP18.3■□□□□ 0.52
SCHIP1-206ENST00000482885 DIEXFQ68CQ4 756 aaKnown RBP18.29■□□□□ 0.52
SCHIP1-206ENST00000482885 NEUROD1Q13562 356 aa18.22■□□□□ 0.51
SCHIP1-206ENST00000482885 ZBTB47Q9UFB7 747 aaPredicted RBP18.22■□□□□ 0.51
SCHIP1-206ENST00000482885 FBLN2P98095 1184 aa18.2■□□□□ 0.5
SCHIP1-206ENST00000482885 ANP32CO43423 234 aa18.17■□□□□ 0.5
SCHIP1-206ENST00000482885 ZNF326Q5BKZ1 582 aaKnown RBP18.15■□□□□ 0.5
SCHIP1-206ENST00000482885 NEFMP07197 916 aa18.11■□□□□ 0.49
SCHIP1-206ENST00000482885 CDK11AQ9UQ88 783 aaPredicted RBP18.04■□□□□ 0.48
SCHIP1-206ENST00000482885 BCANQ96GW7 911 aa18.03■□□□□ 0.48
SCHIP1-206ENST00000482885 CANXP27824 592 aaKnown RBP18.01■□□□□ 0.47
SCHIP1-206ENST00000482885 CSRNP3Q8WYN3 585 aa17.97■□□□□ 0.47
SCHIP1-206ENST00000482885 SLC24A1O60721 1099 aa17.96■□□□□ 0.47
SCHIP1-206ENST00000482885 ESF1Q9H501 851 aaKnown RBP17.93■□□□□ 0.46
SCHIP1-206ENST00000482885 P3H3Q8IVL6 736 aa17.91■□□□□ 0.46
SCHIP1-206ENST00000482885 ZNF777Q9ULD5 760 aaPredicted RBP17.89■□□□□ 0.45
SCHIP1-206ENST00000482885 ARID3CA6NKF2 412 aa17.84■□□□□ 0.45
SCHIP1-206ENST00000482885 NPM1P06748 294 aaKnown RBP eCLIP17.82■□□□□ 0.44
SCHIP1-206ENST00000482885 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
SCHIP1-206ENST00000482885 GTF3C3Q9Y5Q9 886 aa17.76■□□□□ 0.43
SCHIP1-206ENST00000482885 BCL11AQ9H165 835 aa17.73■□□□□ 0.43
SCHIP1-206ENST00000482885 TONSLQ96HA7 1378 aa17.72■□□□□ 0.43
SCHIP1-206ENST00000482885 ANP32AP39687 249 aaKnown RBP17.71■□□□□ 0.43
SCHIP1-206ENST00000482885 CHGAP10645 457 aaKnown RBP17.7■□□□□ 0.42
SCHIP1-206ENST00000482885 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
SCHIP1-206ENST00000482885 UPF2Q9HAU5 1272 aaKnown RBP17.58■□□□□ 0.41
SCHIP1-206ENST00000482885 TSPY4P0CV99 314 aa17.56■□□□□ 0.4
SCHIP1-206ENST00000482885 TSPY10P0CW01 314 aa17.56■□□□□ 0.4
SCHIP1-206ENST00000482885 ANP32BQ92688 251 aaKnown RBP17.56■□□□□ 0.4
SCHIP1-206ENST00000482885 HSP90AA1P07900 732 aaKnown RBP17.54■□□□□ 0.4
SCHIP1-206ENST00000482885 ACIN1Q9UKV3 1341 aaKnown RBP17.53■□□□□ 0.4
SCHIP1-206ENST00000482885 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.52■□□□□ 0.4
SCHIP1-206ENST00000482885 NPM2Q86SE8 214 aaKnown RBP17.49■□□□□ 0.39
SCHIP1-206ENST00000482885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.39
SCHIP1-206ENST00000482885 HNRNPUQ00839 825 aaKnown RBP eCLIP17.48■□□□□ 0.39
SCHIP1-206ENST00000482885 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
SCHIP1-206ENST00000482885 TMC1Q8TDI8 760 aa17.47■□□□□ 0.39
SCHIP1-206ENST00000482885 WDR43Q15061 677 aaKnown RBP eCLIP17.46■□□□□ 0.39
SCHIP1-206ENST00000482885 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
SCHIP1-206ENST00000482885 MTUS2Q5JR59 1369 aa17.46■□□□□ 0.39
SCHIP1-206ENST00000482885 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
SCHIP1-206ENST00000482885 FAM9BQ8IZU0 186 aa17.44■□□□□ 0.38
SCHIP1-206ENST00000482885 DDX10Q13206 875 aaKnown RBP17.42■□□□□ 0.38
SCHIP1-206ENST00000482885 FKBP8Q14318 412 aa17.42■□□□□ 0.38
SCHIP1-206ENST00000482885 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
SCHIP1-206ENST00000482885 DCAF1Q9Y4B6 1507 aa17.39■□□□□ 0.37
SCHIP1-206ENST00000482885 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
SCHIP1-206ENST00000482885 KDM2AQ9Y2K7 1162 aa17.34■□□□□ 0.37
SCHIP1-206ENST00000482885 MYH16Q9H6N6 1097 aa17.33■□□□□ 0.36
SCHIP1-206ENST00000482885 RSF1Q96T23 1441 aaPredicted RBP17.33■□□□□ 0.36
SCHIP1-206ENST00000482885 SALL2Q9Y467 1007 aaPredicted RBP17.32■□□□□ 0.36
SCHIP1-206ENST00000482885 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
SCHIP1-206ENST00000482885 PLEKHD1A6NEE1 506 aa17.29■□□□□ 0.36
SCHIP1-206ENST00000482885 PPP1R15AO75807 674 aaPredicted RBP17.29■□□□□ 0.36
SCHIP1-206ENST00000482885 CLIP1P30622 1438 aa17.29■□□□□ 0.36
SCHIP1-206ENST00000482885 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
SCHIP1-206ENST00000482885 EIF4G2P78344 907 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCHIP1-206ENST00000482885 EEA1Q15075 1411 aa17.27■□□□□ 0.35
SCHIP1-206ENST00000482885 CDCA8Q53HL2 280 aa17.23■□□□□ 0.35
SCHIP1-206ENST00000482885 RB1CC1Q8TDY2 1594 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms