RNA–Protein interactions for RNA: ENST00000481185.1

SIM2-204, Transcript of SIM bHLH transcription factor 2, humanhuman

TSL 2

Gene SIM2, Length 3,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-204ENST00000481185 NISCHQ9Y2I1 1504 aa27.34■■□□□ 1.97
SIM2-204ENST00000481185 HRCP23327 699 aa26.41■■□□□ 1.82
SIM2-204ENST00000481185 PPARGC1BQ86YN6 1023 aaKnown RBP26.39■■□□□ 1.82
SIM2-204ENST00000481185 PCGF6Q9BYE7 350 aa26.19■■□□□ 1.78
SIM2-204ENST00000481185 SUPT5HO00267 1087 aaKnown RBP25.95■■□□□ 1.75
SIM2-204ENST00000481185 PELP1Q8IZL8 1130 aaKnown RBP25.84■■□□□ 1.73
SIM2-204ENST00000481185 SHROOM4Q9ULL8 1493 aa25.8■■□□□ 1.72
SIM2-204ENST00000481185 SCAF1Q9H7N4 1312 aaKnown RBP25.39■■□□□ 1.65
SIM2-204ENST00000481185 MYO15BQ96JP2 1530 aa25.17■■□□□ 1.62
SIM2-204ENST00000481185 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
SIM2-204ENST00000481185 LOC105371045A0A1W2PR82 267 aa25■■□□□ 1.59
SIM2-204ENST00000481185 MYT1Q01538 1121 aa24.81■■□□□ 1.56
SIM2-204ENST00000481185 TRIM26Q12899 539 aaPredicted RBP24.76■■□□□ 1.55
SIM2-204ENST00000481185 GTF3C3Q9Y5Q9 886 aa24.64■■□□□ 1.54
SIM2-204ENST00000481185 NEUROD1Q13562 356 aa24.63■■□□□ 1.53
SIM2-204ENST00000481185 ACIN1Q9UKV3 1341 aaKnown RBP24.55■■□□□ 1.52
SIM2-204ENST00000481185 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
SIM2-204ENST00000481185 ZEB1P37275 1124 aaPredicted RBP24.52■■□□□ 1.52
SIM2-204ENST00000481185 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
SIM2-204ENST00000481185 DCAF1Q9Y4B6 1507 aa24.32■■□□□ 1.48
SIM2-204ENST00000481185 CENPBP07199 599 aaPredicted RBP24.28■■□□□ 1.48
SIM2-204ENST00000481185 YTHDC1Q96MU7 727 aaKnown RBP24.26■■□□□ 1.47
SIM2-204ENST00000481185 FAM9AQ8IZU1 332 aaPredicted RBP24.2■■□□□ 1.46
SIM2-204ENST00000481185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.13■■□□□ 1.45
SIM2-204ENST00000481185 DIEXFQ68CQ4 756 aaKnown RBP24.09■■□□□ 1.45
SIM2-204ENST00000481185 CCER1Q8TC90 406 aaPredicted RBP24.06■■□□□ 1.44
SIM2-204ENST00000481185 CCDC180Q9P1Z9 1646 aa24■■□□□ 1.43
SIM2-204ENST00000481185 TTBK1Q5TCY1 1321 aaPredicted RBP23.95■■□□□ 1.42
SIM2-204ENST00000481185 BCL11AQ9H165 835 aa23.71■■□□□ 1.39
SIM2-204ENST00000481185 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
SIM2-204ENST00000481185 MIER1Q8N108 512 aa23.46■■□□□ 1.35
SIM2-204ENST00000481185 ZNF316A6NFI3 1004 aaPredicted RBP23.35■■□□□ 1.33
SIM2-204ENST00000481185 ANP32EQ9BTT0 268 aa23.34■■□□□ 1.33
SIM2-204ENST00000481185 CSRNP3Q8WYN3 585 aa23.31■■□□□ 1.32
SIM2-204ENST00000481185 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
SIM2-204ENST00000481185 BCANQ96GW7 911 aa23.18■■□□□ 1.3
SIM2-204ENST00000481185 SUPT16HQ9Y5B9 1047 aaKnown RBP23.14■■□□□ 1.29
SIM2-204ENST00000481185 TSHZ2Q9NRE2 1034 aa23.13■■□□□ 1.29
SIM2-204ENST00000481185 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
SIM2-204ENST00000481185 PRKCSHP14314 528 aaPredicted RBP22.93■■□□□ 1.26
SIM2-204ENST00000481185 ITGAEP38570 1179 aa22.73■■□□□ 1.23
SIM2-204ENST00000481185 FKBP8Q14318 412 aa22.71■■□□□ 1.23
SIM2-204ENST00000481185 ERICH6Q7L0X2 663 aa22.63■■□□□ 1.21
SIM2-204ENST00000481185 RBM19Q9Y4C8 960 aaKnown RBP22.63■■□□□ 1.21
SIM2-204ENST00000481185 KCNH8Q96L42 1107 aa22.61■■□□□ 1.21
SIM2-204ENST00000481185 UBTFP17480 764 aaKnown RBP22.59■■□□□ 1.21
SIM2-204ENST00000481185 RANGAP1P46060 587 aaPredicted RBP22.57■■□□□ 1.2
SIM2-204ENST00000481185 CLSPNQ9HAW4 1339 aa22.49■■□□□ 1.19
SIM2-204ENST00000481185 NEFLP07196 543 aa22.47■■□□□ 1.19
SIM2-204ENST00000481185 MSH5O43196 834 aa22.41■■□□□ 1.18
SIM2-204ENST00000481185 RSF1Q96T23 1441 aaPredicted RBP22.41■■□□□ 1.18
SIM2-204ENST00000481185 ANO8Q9HCE9 1232 aaPredicted RBP22.39■■□□□ 1.17
SIM2-204ENST00000481185 RB1CC1Q8TDY2 1594 aa22.38■■□□□ 1.17
SIM2-204ENST00000481185 TRIM52Q96A61 297 aa22.36■■□□□ 1.17
SIM2-204ENST00000481185 IRX6P78412 446 aaPredicted RBP22.3■■□□□ 1.16
SIM2-204ENST00000481185 CEP162Q5TB80 1403 aa22.28■■□□□ 1.16
SIM2-204ENST00000481185 APLP2Q06481 763 aa22.26■■□□□ 1.15
SIM2-204ENST00000481185 DEKP35659 375 aaKnown RBP22.25■■□□□ 1.15
SIM2-204ENST00000481185 NBR1Q14596 966 aa22.25■■□□□ 1.15
SIM2-204ENST00000481185 CCDC136Q96JN2 1154 aa22.24■■□□□ 1.15
SIM2-204ENST00000481185 DDX10Q13206 875 aaKnown RBP22.19■■□□□ 1.14
SIM2-204ENST00000481185 RTN4Q9NQC3 1192 aaKnown RBP22.16■■□□□ 1.14
SIM2-204ENST00000481185 HIRIP3Q9BW71 556 aaPredicted RBP22.14■■□□□ 1.14
SIM2-204ENST00000481185 SALL2Q9Y467 1007 aaPredicted RBP22.1■■□□□ 1.13
SIM2-204ENST00000481185 CDK11AQ9UQ88 783 aaPredicted RBP22.09■■□□□ 1.13
SIM2-204ENST00000481185 ABCC9O60706 1549 aa22.05■■□□□ 1.12
SIM2-204ENST00000481185 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.05■■□□□ 1.12
SIM2-204ENST00000481185 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
SIM2-204ENST00000481185 SOGA1O94964 1423 aa21.96■■□□□ 1.11
SIM2-204ENST00000481185 SCRIBQ14160 1630 aa21.93■■□□□ 1.1
SIM2-204ENST00000481185 TNIKQ9UKE5 1360 aa21.89■■□□□ 1.09
SIM2-204ENST00000481185 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
SIM2-204ENST00000481185 FANCIQ9NVI1 1328 aa21.86■■□□□ 1.09
SIM2-204ENST00000481185 IL27Q8NEV9 243 aa21.86■■□□□ 1.09
SIM2-204ENST00000481185 ABCC8Q09428 1581 aa21.85■■□□□ 1.09
SIM2-204ENST00000481185 DHX57Q6P158 1386 aaKnown RBP21.83■■□□□ 1.09
SIM2-204ENST00000481185 HNRNPUQ00839 825 aaKnown RBP eCLIP21.81■■□□□ 1.08
SIM2-204ENST00000481185 RUSC2Q8N2Y8 1516 aa21.81■■□□□ 1.08
SIM2-204ENST00000481185 ANP32CO43423 234 aa21.8■■□□□ 1.08
SIM2-204ENST00000481185 RTL5Q5HYW3 569 aaPredicted RBP21.8■■□□□ 1.08
SIM2-204ENST00000481185 CECR2Q9BXF3 1484 aa21.79■■□□□ 1.08
SIM2-204ENST00000481185 EIF5BO60841 1220 aaKnown RBP21.79■■□□□ 1.08
SIM2-204ENST00000481185 PAK3O75914 559 aaPredicted RBP21.79■■□□□ 1.08
SIM2-204ENST00000481185 B4GALNT3Q6L9W6 998 aa21.78■■□□□ 1.08
SIM2-204ENST00000481185 MYT1LQ9UL68 1186 aa21.74■■□□□ 1.07
SIM2-204ENST00000481185 NOP58Q9Y2X3 529 aaKnown RBP21.73■■□□□ 1.07
SIM2-204ENST00000481185 SIN3AQ96ST3 1273 aa21.7■■□□□ 1.06
SIM2-204ENST00000481185 CLIP1P30622 1438 aa21.65■■□□□ 1.06
SIM2-204ENST00000481185 CNGB1Q14028 1251 aaPredicted RBP21.64■■□□□ 1.05
SIM2-204ENST00000481185 MROH2BQ7Z745 1585 aa21.62■■□□□ 1.05
SIM2-204ENST00000481185 SENP3-EIF4A1A0A087X0R7 540 aa21.6■■□□□ 1.05
SIM2-204ENST00000481185 KANK4Q5T7N3 995 aaPredicted RBP21.6■■□□□ 1.05
SIM2-204ENST00000481185 NPM2Q86SE8 214 aaKnown RBP21.59■■□□□ 1.05
SIM2-204ENST00000481185 WIZO95785 1651 aa21.56■■□□□ 1.04
SIM2-204ENST00000481185 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
SIM2-204ENST00000481185 ZBTB47Q9UFB7 747 aaPredicted RBP21.53■■□□□ 1.04
SIM2-204ENST00000481185 LAS1LQ9Y4W2 734 aaKnown RBP21.53■■□□□ 1.04
SIM2-204ENST00000481185 PPP4R2Q9NY27 417 aa21.51■■□□□ 1.03
SIM2-204ENST00000481185 ANP32AP39687 249 aaKnown RBP21.51■■□□□ 1.03
SIM2-204ENST00000481185 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms