RNA–Protein interactions for RNA: ENST00000479991.1

RTL5-201, Transcript of retrotransposon Gag like 5, humanhuman

TSL 1 (best)

Gene RTL5, Length 4,339 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL5-201ENST00000479991 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
RTL5-201ENST00000479991 DCAF8L2P0C7V8 631 aa22.63■■□□□ 1.21
RTL5-201ENST00000479991 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
RTL5-201ENST00000479991 SHROOM4Q9ULL8 1493 aa22.07■■□□□ 1.12
RTL5-201ENST00000479991 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
RTL5-201ENST00000479991 PCGF6Q9BYE7 350 aa21.07■□□□□ 0.96
RTL5-201ENST00000479991 FAM9AQ8IZU1 332 aaPredicted RBP20.89■□□□□ 0.94
RTL5-201ENST00000479991 TTBK1Q5TCY1 1321 aaPredicted RBP20.65■□□□□ 0.9
RTL5-201ENST00000479991 LOC105371045A0A1W2PR82 267 aa20.41■□□□□ 0.86
RTL5-201ENST00000479991 PPARGC1BQ86YN6 1023 aaKnown RBP20.37■□□□□ 0.85
RTL5-201ENST00000479991 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
RTL5-201ENST00000479991 TRIM41Q8WV44 630 aa20.31■□□□□ 0.84
RTL5-201ENST00000479991 HRCP23327 699 aa20.24■□□□□ 0.83
RTL5-201ENST00000479991 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
RTL5-201ENST00000479991 CCER1Q8TC90 406 aaPredicted RBP20.05■□□□□ 0.8
RTL5-201ENST00000479991 ZCCHC6Q5VYS8 1495 aaKnown RBP19.95■□□□□ 0.78
RTL5-201ENST00000479991 TRIM26Q12899 539 aaPredicted RBP19.94■□□□□ 0.78
RTL5-201ENST00000479991 ABCC9O60706 1549 aa19.93■□□□□ 0.78
RTL5-201ENST00000479991 APLP2Q06481 763 aa19.9■□□□□ 0.78
RTL5-201ENST00000479991 ZEB1P37275 1124 aaPredicted RBP19.84■□□□□ 0.77
RTL5-201ENST00000479991 CCDC180Q9P1Z9 1646 aa19.84■□□□□ 0.77
RTL5-201ENST00000479991 UBTFP17480 764 aaKnown RBP19.83■□□□□ 0.76
RTL5-201ENST00000479991 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
RTL5-201ENST00000479991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.65■□□□□ 0.74
RTL5-201ENST00000479991 CENPBP07199 599 aaPredicted RBP19.64■□□□□ 0.73
RTL5-201ENST00000479991 ATP1B4Q9UN42 357 aaPredicted RBP19.51■□□□□ 0.71
RTL5-201ENST00000479991 HNRNPUL2Q1KMD3 747 aaKnown RBP19.47■□□□□ 0.71
RTL5-201ENST00000479991 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
RTL5-201ENST00000479991 PELP1Q8IZL8 1130 aaKnown RBP19.37■□□□□ 0.69
RTL5-201ENST00000479991 ITGAEP38570 1179 aa19.36■□□□□ 0.69
RTL5-201ENST00000479991 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
RTL5-201ENST00000479991 DCAF1Q9Y4B6 1507 aa19.18■□□□□ 0.66
RTL5-201ENST00000479991 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
RTL5-201ENST00000479991 GTF3C3Q9Y5Q9 886 aa19.09■□□□□ 0.65
RTL5-201ENST00000479991 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
RTL5-201ENST00000479991 CNGB1Q14028 1251 aaPredicted RBP18.94■□□□□ 0.62
RTL5-201ENST00000479991 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
RTL5-201ENST00000479991 NEFLP07196 543 aa18.86■□□□□ 0.61
RTL5-201ENST00000479991 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
RTL5-201ENST00000479991 ACIN1Q9UKV3 1341 aaKnown RBP18.84■□□□□ 0.61
RTL5-201ENST00000479991 ERICH6Q7L0X2 663 aa18.81■□□□□ 0.6
RTL5-201ENST00000479991 SCAF1Q9H7N4 1312 aaKnown RBP18.81■□□□□ 0.6
RTL5-201ENST00000479991 NEUROD1Q13562 356 aa18.79■□□□□ 0.6
RTL5-201ENST00000479991 BCANQ96GW7 911 aa18.78■□□□□ 0.6
RTL5-201ENST00000479991 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
RTL5-201ENST00000479991 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
RTL5-201ENST00000479991 NACADO15069 1562 aa18.76■□□□□ 0.59
RTL5-201ENST00000479991 POLR3GLQ9BT43 218 aa18.75■□□□□ 0.59
RTL5-201ENST00000479991 FAM50AQ14320 339 aaKnown RBP18.72■□□□□ 0.59
RTL5-201ENST00000479991 P3H3Q8IVL6 736 aa18.61■□□□□ 0.57
RTL5-201ENST00000479991 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
RTL5-201ENST00000479991 MIER1Q8N108 512 aa18.51■□□□□ 0.55
RTL5-201ENST00000479991 MYT1Q01538 1121 aa18.49■□□□□ 0.55
RTL5-201ENST00000479991 MROH2BQ7Z745 1585 aa18.46■□□□□ 0.55
RTL5-201ENST00000479991 ARID3CA6NKF2 412 aa18.44■□□□□ 0.54
RTL5-201ENST00000479991 TRIM52Q96A61 297 aa18.4■□□□□ 0.54
RTL5-201ENST00000479991 HIRIP3Q9BW71 556 aaPredicted RBP18.37■□□□□ 0.53
RTL5-201ENST00000479991 WIZO95785 1651 aa18.33■□□□□ 0.53
RTL5-201ENST00000479991 DDX10Q13206 875 aaKnown RBP18.33■□□□□ 0.52
RTL5-201ENST00000479991 ZNF326Q5BKZ1 582 aaKnown RBP18.3■□□□□ 0.52
RTL5-201ENST00000479991 ANP32CO43423 234 aa18.28■□□□□ 0.52
RTL5-201ENST00000479991 CEP162Q5TB80 1403 aa18.25■□□□□ 0.51
RTL5-201ENST00000479991 FKBP8Q14318 412 aa18.24■□□□□ 0.51
RTL5-201ENST00000479991 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
RTL5-201ENST00000479991 CLIP1P30622 1438 aa18.15■□□□□ 0.5
RTL5-201ENST00000479991 MYT1LQ9UL68 1186 aa18.15■□□□□ 0.5
RTL5-201ENST00000479991 SOGA1O94964 1423 aa18.13■□□□□ 0.49
RTL5-201ENST00000479991 ABCC8Q09428 1581 aa18.1■□□□□ 0.49
RTL5-201ENST00000479991 IRX6P78412 446 aaPredicted RBP18.09■□□□□ 0.49
RTL5-201ENST00000479991 CHIC2Q9UKJ5 165 aa18.09■□□□□ 0.49
RTL5-201ENST00000479991 CCDC88BA6NC98 1476 aa18.08■□□□□ 0.49
RTL5-201ENST00000479991 FBLN2P98095 1184 aa18.07■□□□□ 0.48
RTL5-201ENST00000479991 SENP3-EIF4A1A0A087X0R7 540 aa18.06■□□□□ 0.48
RTL5-201ENST00000479991 HNRNPUQ00839 825 aaKnown RBP eCLIP18.05■□□□□ 0.48
RTL5-201ENST00000479991 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.48
RTL5-201ENST00000479991 CDK11AQ9UQ88 783 aaPredicted RBP18.02■□□□□ 0.47
RTL5-201ENST00000479991 FAM9BQ8IZU0 186 aa18■□□□□ 0.47
RTL5-201ENST00000479991 TNIKQ9UKE5 1360 aa18■□□□□ 0.47
RTL5-201ENST00000479991 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
RTL5-201ENST00000479991 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
RTL5-201ENST00000479991 SMARCA4P51532 1647 aa17.97■□□□□ 0.47
RTL5-201ENST00000479991 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
RTL5-201ENST00000479991 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
RTL5-201ENST00000479991 TONSLQ96HA7 1378 aa17.96■□□□□ 0.47
RTL5-201ENST00000479991 DAXXQ9UER7 740 aaPredicted RBP17.95■□□□□ 0.46
RTL5-201ENST00000479991 GOLGA3Q08378 1498 aa17.94■□□□□ 0.46
RTL5-201ENST00000479991 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
RTL5-201ENST00000479991 EEA1Q15075 1411 aa17.89■□□□□ 0.45
RTL5-201ENST00000479991 SMARCA2P51531 1590 aa17.89■□□□□ 0.45
RTL5-201ENST00000479991 KANK4Q5T7N3 995 aaPredicted RBP17.88■□□□□ 0.45
RTL5-201ENST00000479991 RRP7BPQ9NSQ0 103 aa17.87■□□□□ 0.45
RTL5-201ENST00000479991 RTL5Q5HYW3 569 aaPredicted RBP17.86■□□□□ 0.45
RTL5-201ENST00000479991 RUSC2Q8N2Y8 1516 aa17.85■□□□□ 0.45
RTL5-201ENST00000479991 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
RTL5-201ENST00000479991 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
RTL5-201ENST00000479991 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.44
RTL5-201ENST00000479991 SUPT16HQ9Y5B9 1047 aaKnown RBP17.81■□□□□ 0.44
RTL5-201ENST00000479991 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
RTL5-201ENST00000479991 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
RTL5-201ENST00000479991 MTUS2Q5JR59 1369 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms