RNA–Protein interactions for RNA: ENST00000479187.5

LRRK2-206, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5

Gene LRRK2, Length 8,306 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-206ENST00000479187 DCAF8L2P0C7V8 631 aa8.32□□□□□ -1.08
LRRK2-206ENST00000479187 FAM9AQ8IZU1 332 aaPredicted RBP7.83□□□□□ -1.16
LRRK2-206ENST00000479187 NISCHQ9Y2I1 1504 aa7.36□□□□□ -1.23
LRRK2-206ENST00000479187 MYT1LQ9UL68 1186 aa7.33□□□□□ -1.24
LRRK2-206ENST00000479187 APLP2Q06481 763 aa7.25□□□□□ -1.25
LRRK2-206ENST00000479187 ATP1B4Q9UN42 357 aaPredicted RBP7.18□□□□□ -1.26
LRRK2-206ENST00000479187 SUPT5HO00267 1087 aaKnown RBP7.11□□□□□ -1.27
LRRK2-206ENST00000479187 TTBK1Q5TCY1 1321 aaPredicted RBP7.1□□□□□ -1.27
LRRK2-206ENST00000479187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.08□□□□□ -1.28
LRRK2-206ENST00000479187 HNRNPUL2Q1KMD3 747 aaKnown RBP7.08□□□□□ -1.28
LRRK2-206ENST00000479187 EHMT2Q96KQ7 1210 aa7.08□□□□□ -1.28
LRRK2-206ENST00000479187 CHIC1Q5VXU3 224 aa7.04□□□□□ -1.28
LRRK2-206ENST00000479187 RANGAP1P46060 587 aaPredicted RBP7.01□□□□□ -1.29
LRRK2-206ENST00000479187 SHROOM4Q9ULL8 1493 aa7□□□□□ -1.29
LRRK2-206ENST00000479187 AEBP2Q6ZN18 517 aaPredicted RBP6.98□□□□□ -1.29
LRRK2-206ENST00000479187 ESF1Q9H501 851 aaKnown RBP6.96□□□□□ -1.3
LRRK2-206ENST00000479187 FBLN2P98095 1184 aa6.93□□□□□ -1.3
LRRK2-206ENST00000479187 NPM1P06748 294 aaKnown RBP eCLIP6.91□□□□□ -1.3
LRRK2-206ENST00000479187 BCANQ96GW7 911 aa6.91□□□□□ -1.3
LRRK2-206ENST00000479187 PLPPR3Q6T4P5 718 aa6.88□□□□□ -1.31
LRRK2-206ENST00000479187 TRHP20396 242 aaPredicted RBP6.84□□□□□ -1.32
LRRK2-206ENST00000479187 SLC4A1APQ9BWU0 796 aaKnown RBP6.83□□□□□ -1.32
LRRK2-206ENST00000479187 PABPN1Q86U42 306 aaKnown RBP eCLIP6.82□□□□□ -1.32
LRRK2-206ENST00000479187 ABCC9O60706 1549 aa6.81□□□□□ -1.32
LRRK2-206ENST00000479187 UBTFP17480 764 aaKnown RBP6.79□□□□□ -1.32
LRRK2-206ENST00000479187 TRIM41Q8WV44 630 aa6.73□□□□□ -1.33
LRRK2-206ENST00000479187 STAG3Q9UJ98 1225 aa6.72□□□□□ -1.33
LRRK2-206ENST00000479187 SLC24A1O60721 1099 aa6.67□□□□□ -1.34
LRRK2-206ENST00000479187 PELP1Q8IZL8 1130 aaKnown RBP6.67□□□□□ -1.34
LRRK2-206ENST00000479187 DCAF8L1A6NGE4 600 aa6.67□□□□□ -1.34
LRRK2-206ENST00000479187 SCAF1Q9H7N4 1312 aaKnown RBP6.67□□□□□ -1.34
LRRK2-206ENST00000479187 A0A0G2JS52 829 aa6.65□□□□□ -1.35
LRRK2-206ENST00000479187 ARID4BQ4LE39 1312 aaPredicted RBP6.65□□□□□ -1.35
LRRK2-206ENST00000479187 HAP1P54257 671 aaPredicted RBP6.63□□□□□ -1.35
LRRK2-206ENST00000479187 POLR3GLQ9BT43 218 aa6.63□□□□□ -1.35
LRRK2-206ENST00000479187 C14orf37Q86TY3 774 aa6.61□□□□□ -1.35
LRRK2-206ENST00000479187 FOXD1Q16676 465 aa6.59□□□□□ -1.35
LRRK2-206ENST00000479187 MYT1Q01538 1121 aa6.58□□□□□ -1.36
LRRK2-206ENST00000479187 CHMP7Q8WUX9 453 aaPredicted RBP6.56□□□□□ -1.36
LRRK2-206ENST00000479187 NPM2Q86SE8 214 aaKnown RBP6.55□□□□□ -1.36
LRRK2-206ENST00000479187 NEFMP07197 916 aa6.54□□□□□ -1.36
LRRK2-206ENST00000479187 ERCC6Q03468 1493 aa6.53□□□□□ -1.36
LRRK2-206ENST00000479187 CHGAP10645 457 aaKnown RBP6.53□□□□□ -1.36
LRRK2-206ENST00000479187 PHF23Q9BUL5 403 aaPredicted RBP6.53□□□□□ -1.36
LRRK2-206ENST00000479187 ITGAEP38570 1179 aa6.52□□□□□ -1.37
LRRK2-206ENST00000479187 SENP3Q9H4L4 574 aaPredicted RBP6.52□□□□□ -1.37
LRRK2-206ENST00000479187 CDK11AQ9UQ88 783 aaPredicted RBP6.51□□□□□ -1.37
LRRK2-206ENST00000479187 TRIM52Q96A61 297 aa6.49□□□□□ -1.37
LRRK2-206ENST00000479187 PPP1R15AO75807 674 aaPredicted RBP6.47□□□□□ -1.37
LRRK2-206ENST00000479187 ZBTB47Q9UFB7 747 aaPredicted RBP6.47□□□□□ -1.37
LRRK2-206ENST00000479187 ZNF777Q9ULD5 760 aaPredicted RBP6.46□□□□□ -1.37
LRRK2-206ENST00000479187 ZBTB7CA1YPR0 619 aa6.46□□□□□ -1.38
LRRK2-206ENST00000479187 ARID3CA6NKF2 412 aa6.45□□□□□ -1.38
LRRK2-206ENST00000479187 CCER1Q8TC90 406 aaPredicted RBP6.45□□□□□ -1.38
LRRK2-206ENST00000479187 NPHP1O15259 732 aa6.44□□□□□ -1.38
LRRK2-206ENST00000479187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.44□□□□□ -1.38
LRRK2-206ENST00000479187 PLEKHG5O94827 1062 aa6.43□□□□□ -1.38
LRRK2-206ENST00000479187 FAM50AQ14320 339 aaKnown RBP6.42□□□□□ -1.38
LRRK2-206ENST00000479187 CNGB1Q14028 1251 aaPredicted RBP6.41□□□□□ -1.38
LRRK2-206ENST00000479187 MEX3CQ5U5Q3 659 aaKnown RBP6.4□□□□□ -1.38
LRRK2-206ENST00000479187 ERICH6Q7L0X2 663 aa6.37□□□□□ -1.39
LRRK2-206ENST00000479187 PCGF6Q9BYE7 350 aa6.37□□□□□ -1.39
LRRK2-206ENST00000479187 KCNH8Q96L42 1107 aa6.37□□□□□ -1.39
LRRK2-206ENST00000479187 CCDC9Q9Y3X0 531 aaKnown RBP6.37□□□□□ -1.39
LRRK2-206ENST00000479187 LMOD2Q6P5Q4 547 aa6.36□□□□□ -1.39
LRRK2-206ENST00000479187 ZNF326Q5BKZ1 582 aaKnown RBP6.35□□□□□ -1.39
LRRK2-206ENST00000479187 HDGFP51858 240 aaKnown RBP6.34□□□□□ -1.39
LRRK2-206ENST00000479187 DAXXQ9UER7 740 aaPredicted RBP6.34□□□□□ -1.4
LRRK2-206ENST00000479187 ARXQ96QS3 562 aa6.33□□□□□ -1.4
LRRK2-206ENST00000479187 NEFLP07196 543 aa6.33□□□□□ -1.4
LRRK2-206ENST00000479187 TMX4Q9H1E5 349 aaPredicted RBP6.33□□□□□ -1.4
LRRK2-206ENST00000479187 P3H3Q8IVL6 736 aa6.32□□□□□ -1.4
LRRK2-206ENST00000479187 MLECQ14165 292 aa6.32□□□□□ -1.4
LRRK2-206ENST00000479187 SF3B2Q13435 895 aaKnown RBP6.31□□□□□ -1.4
LRRK2-206ENST00000479187 CLSPNQ9HAW4 1339 aa6.28□□□□□ -1.4
LRRK2-206ENST00000479187 TSPY4P0CV99 314 aa6.27□□□□□ -1.41
LRRK2-206ENST00000479187 TSPY10P0CW01 314 aa6.27□□□□□ -1.41
LRRK2-206ENST00000479187 KRI1Q8N9T8 703 aaKnown RBP6.26□□□□□ -1.41
LRRK2-206ENST00000479187 BCL11AQ9H165 835 aa6.26□□□□□ -1.41
LRRK2-206ENST00000479187 PLEKHD1A6NEE1 506 aa6.25□□□□□ -1.41
LRRK2-206ENST00000479187 EIF4G2P78344 907 aaKnown RBP eCLIP6.24□□□□□ -1.41
LRRK2-206ENST00000479187 KLHL34Q8N239 644 aa6.24□□□□□ -1.41
LRRK2-206ENST00000479187 CANXP27824 592 aaKnown RBP6.23□□□□□ -1.41
LRRK2-206ENST00000479187 GOLGA2Q08379 1002 aa6.23□□□□□ -1.41
LRRK2-206ENST00000479187 OSCARQ8IYS5 282 aa6.22□□□□□ -1.41
LRRK2-206ENST00000479187 CYB5RLQ6IPT4 315 aa6.22□□□□□ -1.41
LRRK2-206ENST00000479187 MSH5O43196 834 aa6.21□□□□□ -1.42
LRRK2-206ENST00000479187 RB1CC1Q8TDY2 1594 aa6.21□□□□□ -1.42
LRRK2-206ENST00000479187 SCRIBQ14160 1630 aa6.2□□□□□ -1.42
LRRK2-206ENST00000479187 CDK11BP21127 795 aaKnown RBP6.19□□□□□ -1.42
LRRK2-206ENST00000479187 PPARGC1BQ86YN6 1023 aaKnown RBP6.19□□□□□ -1.42
LRRK2-206ENST00000479187 G3V3G9 751 aa6.19□□□□□ -1.42
LRRK2-206ENST00000479187 DCAF8Q5TAQ9 597 aa6.19□□□□□ -1.42
LRRK2-206ENST00000479187 EID1Q9Y6B2 187 aa6.18□□□□□ -1.42
LRRK2-206ENST00000479187 CSB-PGBD3P0DP91 1061 aa6.17□□□□□ -1.42
LRRK2-206ENST00000479187 NEUROD1Q13562 356 aa6.15□□□□□ -1.42
LRRK2-206ENST00000479187 POGKQ9P215 609 aa6.15□□□□□ -1.42
LRRK2-206ENST00000479187 PPP1R1BQ9UD71 204 aaPredicted RBP6.14□□□□□ -1.43
LRRK2-206ENST00000479187 ZEB1P37275 1124 aaPredicted RBP6.13□□□□□ -1.43
LRRK2-206ENST00000479187 TULP1O00294 542 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms