RNA–Protein interactions for RNA: ENST00000479049.6

DYSF-216, Transcript of dysferlin, humanhuman

TSL 5

Gene DYSF, Length 3,399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-216ENST00000479049 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
DYSF-216ENST00000479049 SUPT5HO00267 1087 aaKnown RBP17.14■□□□□ 0.33
DYSF-216ENST00000479049 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
DYSF-216ENST00000479049 HRCP23327 699 aa16.92■□□□□ 0.3
DYSF-216ENST00000479049 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
DYSF-216ENST00000479049 PPARGC1BQ86YN6 1023 aaKnown RBP16.81■□□□□ 0.28
DYSF-216ENST00000479049 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
DYSF-216ENST00000479049 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
DYSF-216ENST00000479049 MYO15BQ96JP2 1530 aa16.38■□□□□ 0.21
DYSF-216ENST00000479049 LOC105371045A0A1W2PR82 267 aa16.35■□□□□ 0.21
DYSF-216ENST00000479049 PELP1Q8IZL8 1130 aaKnown RBP16.22■□□□□ 0.19
DYSF-216ENST00000479049 TRIM26Q12899 539 aaPredicted RBP16.14■□□□□ 0.17
DYSF-216ENST00000479049 EHMT2Q96KQ7 1210 aa16.09■□□□□ 0.17
DYSF-216ENST00000479049 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
DYSF-216ENST00000479049 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.15
DYSF-216ENST00000479049 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
DYSF-216ENST00000479049 DCAF1Q9Y4B6 1507 aa15.9■□□□□ 0.14
DYSF-216ENST00000479049 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
DYSF-216ENST00000479049 TRIM41Q8WV44 630 aa15.72■□□□□ 0.11
DYSF-216ENST00000479049 NEUROD1Q13562 356 aa15.69■□□□□ 0.1
DYSF-216ENST00000479049 GTF3C3Q9Y5Q9 886 aa15.68■□□□□ 0.1
DYSF-216ENST00000479049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
DYSF-216ENST00000479049 CCER1Q8TC90 406 aaPredicted RBP15.67■□□□□ 0.1
DYSF-216ENST00000479049 ACIN1Q9UKV3 1341 aaKnown RBP15.67■□□□□ 0.1
DYSF-216ENST00000479049 TTBK1Q5TCY1 1321 aaPredicted RBP15.64■□□□□ 0.09
DYSF-216ENST00000479049 CENPBP07199 599 aaPredicted RBP15.61■□□□□ 0.09
DYSF-216ENST00000479049 CCDC180Q9P1Z9 1646 aa15.59■□□□□ 0.09
DYSF-216ENST00000479049 YTHDC1Q96MU7 727 aaKnown RBP15.55■□□□□ 0.08
DYSF-216ENST00000479049 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
DYSF-216ENST00000479049 MYT1Q01538 1121 aa15.54■□□□□ 0.08
DYSF-216ENST00000479049 ABCC9O60706 1549 aa15.46■□□□□ 0.07
DYSF-216ENST00000479049 ZNF316A6NFI3 1004 aaPredicted RBP15.18■□□□□ 0.02
DYSF-216ENST00000479049 MIER1Q8N108 512 aa15.13■□□□□ 0.01
DYSF-216ENST00000479049 RSF1Q96T23 1441 aaPredicted RBP15.1■□□□□ 0.01
DYSF-216ENST00000479049 HNRNPUL2Q1KMD3 747 aaKnown RBP15.09■□□□□ 0.01
DYSF-216ENST00000479049 UBTFP17480 764 aaKnown RBP15.05■□□□□ -0
DYSF-216ENST00000479049 RANGAP1P46060 587 aaPredicted RBP14.96□□□□□ -0.01
DYSF-216ENST00000479049 RB1CC1Q8TDY2 1594 aa14.95□□□□□ -0.02
DYSF-216ENST00000479049 PABPN1Q86U42 306 aaKnown RBP eCLIP14.9□□□□□ -0.02
DYSF-216ENST00000479049 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
DYSF-216ENST00000479049 APLP2Q06481 763 aa14.84□□□□□ -0.03
DYSF-216ENST00000479049 BCANQ96GW7 911 aa14.83□□□□□ -0.04
DYSF-216ENST00000479049 SUPT16HQ9Y5B9 1047 aaKnown RBP14.81□□□□□ -0.04
DYSF-216ENST00000479049 CEP162Q5TB80 1403 aa14.77□□□□□ -0.05
DYSF-216ENST00000479049 CECR2Q9BXF3 1484 aa14.74□□□□□ -0.05
DYSF-216ENST00000479049 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
DYSF-216ENST00000479049 ANP32EQ9BTT0 268 aa14.73□□□□□ -0.05
DYSF-216ENST00000479049 TSHZ2Q9NRE2 1034 aa14.71□□□□□ -0.05
DYSF-216ENST00000479049 BCL11AQ9H165 835 aa14.7□□□□□ -0.06
DYSF-216ENST00000479049 SOGA1O94964 1423 aa14.65□□□□□ -0.06
DYSF-216ENST00000479049 ITGAEP38570 1179 aa14.63□□□□□ -0.07
DYSF-216ENST00000479049 MROH2BQ7Z745 1585 aa14.62□□□□□ -0.07
DYSF-216ENST00000479049 CCDC88BA6NC98 1476 aa14.62□□□□□ -0.07
DYSF-216ENST00000479049 FKBP8Q14318 412 aa14.61□□□□□ -0.07
DYSF-216ENST00000479049 WRNQ14191 1432 aaPredicted RBP eCLIP14.61□□□□□ -0.07
DYSF-216ENST00000479049 TNIKQ9UKE5 1360 aa14.6□□□□□ -0.07
DYSF-216ENST00000479049 KCNH8Q96L42 1107 aa14.58□□□□□ -0.08
DYSF-216ENST00000479049 ABCC8Q09428 1581 aa14.58□□□□□ -0.08
DYSF-216ENST00000479049 CLSPNQ9HAW4 1339 aa14.56□□□□□ -0.08
DYSF-216ENST00000479049 NEFLP07196 543 aa14.55□□□□□ -0.08
DYSF-216ENST00000479049 WIZO95785 1651 aa14.53□□□□□ -0.08
DYSF-216ENST00000479049 RUSC2Q8N2Y8 1516 aa14.52□□□□□ -0.08
DYSF-216ENST00000479049 DDX10Q13206 875 aaKnown RBP14.47□□□□□ -0.09
DYSF-216ENST00000479049 ERICH6Q7L0X2 663 aa14.47□□□□□ -0.09
DYSF-216ENST00000479049 TRIM52Q96A61 297 aa14.46□□□□□ -0.1
DYSF-216ENST00000479049 RBM19Q9Y4C8 960 aaKnown RBP14.44□□□□□ -0.1
DYSF-216ENST00000479049 CLIP1P30622 1438 aa14.44□□□□□ -0.1
DYSF-216ENST00000479049 HIRIP3Q9BW71 556 aaPredicted RBP14.42□□□□□ -0.1
DYSF-216ENST00000479049 DNAJC5BQ9UF47 199 aa14.42□□□□□ -0.1
DYSF-216ENST00000479049 GOLGA3Q08378 1498 aa14.41□□□□□ -0.1
DYSF-216ENST00000479049 NACADO15069 1562 aa14.37□□□□□ -0.11
DYSF-216ENST00000479049 DHX57Q6P158 1386 aaKnown RBP14.35□□□□□ -0.11
DYSF-216ENST00000479049 IRX6P78412 446 aaPredicted RBP14.34□□□□□ -0.11
DYSF-216ENST00000479049 EEA1Q15075 1411 aa14.33□□□□□ -0.12
DYSF-216ENST00000479049 KANK4Q5T7N3 995 aaPredicted RBP14.33□□□□□ -0.12
DYSF-216ENST00000479049 VPS8Q8N3P4 1428 aa14.29□□□□□ -0.12
DYSF-216ENST00000479049 ATP1B4Q9UN42 357 aaPredicted RBP14.28□□□□□ -0.12
DYSF-216ENST00000479049 ANP32CO43423 234 aa14.27□□□□□ -0.12
DYSF-216ENST00000479049 SIN3AQ96ST3 1273 aa14.26□□□□□ -0.13
DYSF-216ENST00000479049 CDK11AQ9UQ88 783 aaPredicted RBP14.25□□□□□ -0.13
DYSF-216ENST00000479049 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
DYSF-216ENST00000479049 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
DYSF-216ENST00000479049 FAM50AQ14320 339 aaKnown RBP14.22□□□□□ -0.13
DYSF-216ENST00000479049 MSH5O43196 834 aa14.22□□□□□ -0.13
DYSF-216ENST00000479049 HNRNPUQ00839 825 aaKnown RBP eCLIP14.19□□□□□ -0.14
DYSF-216ENST00000479049 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
DYSF-216ENST00000479049 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
DYSF-216ENST00000479049 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
DYSF-216ENST00000479049 NBR1Q14596 966 aa14.14□□□□□ -0.15
DYSF-216ENST00000479049 SMARCA2P51531 1590 aa14.12□□□□□ -0.15
DYSF-216ENST00000479049 CNGB1Q14028 1251 aaPredicted RBP14.11□□□□□ -0.15
DYSF-216ENST00000479049 CCNB3Q8WWL7 1395 aa14.1□□□□□ -0.15
DYSF-216ENST00000479049 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
DYSF-216ENST00000479049 RAB3GAP2Q9H2M9 1393 aa14.09□□□□□ -0.15
DYSF-216ENST00000479049 DEKP35659 375 aaKnown RBP14.08□□□□□ -0.16
DYSF-216ENST00000479049 KIF21BO75037 1637 aa14.07□□□□□ -0.16
DYSF-216ENST00000479049 PPP1R15AO75807 674 aaPredicted RBP14.06□□□□□ -0.16
DYSF-216ENST00000479049 P3H3Q8IVL6 736 aa14.06□□□□□ -0.16
DYSF-216ENST00000479049 CCER2I3L3R5 266 aa14.04□□□□□ -0.16
DYSF-216ENST00000479049 B4GALNT3Q6L9W6 998 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms