RNA–Protein interactions for RNA: ENST00000477859.1

ITGB8-203, Transcript of integrin subunit beta 8, humanhuman

TSL 1 (best)

Gene ITGB8, Length 5,573 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB8-203ENST00000477859 DCAF8L2P0C7V8 631 aa15.77■□□□□ 0.11
ITGB8-203ENST00000477859 NISCHQ9Y2I1 1504 aa15.68■□□□□ 0.1
ITGB8-203ENST00000477859 SHROOM4Q9ULL8 1493 aa14.75□□□□□ -0.05
ITGB8-203ENST00000477859 SUPT5HO00267 1087 aaKnown RBP14.66□□□□□ -0.06
ITGB8-203ENST00000477859 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
ITGB8-203ENST00000477859 FAM9AQ8IZU1 332 aaPredicted RBP13.82□□□□□ -0.2
ITGB8-203ENST00000477859 ABCC9O60706 1549 aa13.78□□□□□ -0.2
ITGB8-203ENST00000477859 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
ITGB8-203ENST00000477859 RANGAP1P46060 587 aaPredicted RBP13.66□□□□□ -0.22
ITGB8-203ENST00000477859 TTBK1Q5TCY1 1321 aaPredicted RBP13.61□□□□□ -0.23
ITGB8-203ENST00000477859 MYT1Q01538 1121 aa13.58□□□□□ -0.24
ITGB8-203ENST00000477859 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
ITGB8-203ENST00000477859 APLP2Q06481 763 aa13.55□□□□□ -0.24
ITGB8-203ENST00000477859 TRIM41Q8WV44 630 aa13.55□□□□□ -0.24
ITGB8-203ENST00000477859 ATP1B4Q9UN42 357 aaPredicted RBP13.45□□□□□ -0.26
ITGB8-203ENST00000477859 UBTFP17480 764 aaKnown RBP13.36□□□□□ -0.27
ITGB8-203ENST00000477859 PCGF6Q9BYE7 350 aa13.31□□□□□ -0.28
ITGB8-203ENST00000477859 HRCP23327 699 aa13.17□□□□□ -0.3
ITGB8-203ENST00000477859 PPARGC1BQ86YN6 1023 aaKnown RBP13.16□□□□□ -0.3
ITGB8-203ENST00000477859 SCRIBQ14160 1630 aa13.11□□□□□ -0.31
ITGB8-203ENST00000477859 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
ITGB8-203ENST00000477859 CCDC180Q9P1Z9 1646 aa13.06□□□□□ -0.32
ITGB8-203ENST00000477859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.05□□□□□ -0.32
ITGB8-203ENST00000477859 HNRNPUL2Q1KMD3 747 aaKnown RBP13.05□□□□□ -0.32
ITGB8-203ENST00000477859 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
ITGB8-203ENST00000477859 LOC105371045A0A1W2PR82 267 aa13.01□□□□□ -0.33
ITGB8-203ENST00000477859 CHIC1Q5VXU3 224 aa12.99□□□□□ -0.33
ITGB8-203ENST00000477859 ZCCHC6Q5VYS8 1495 aaKnown RBP12.97□□□□□ -0.33
ITGB8-203ENST00000477859 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
ITGB8-203ENST00000477859 CCER1Q8TC90 406 aaPredicted RBP12.94□□□□□ -0.34
ITGB8-203ENST00000477859 ITGAEP38570 1179 aa12.91□□□□□ -0.34
ITGB8-203ENST00000477859 FBLN2P98095 1184 aa12.89□□□□□ -0.35
ITGB8-203ENST00000477859 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
ITGB8-203ENST00000477859 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
ITGB8-203ENST00000477859 YTHDC1Q96MU7 727 aaKnown RBP12.69□□□□□ -0.38
ITGB8-203ENST00000477859 ARID3CA6NKF2 412 aa12.68□□□□□ -0.38
ITGB8-203ENST00000477859 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
ITGB8-203ENST00000477859 P3H3Q8IVL6 736 aa12.67□□□□□ -0.38
ITGB8-203ENST00000477859 NACADO15069 1562 aa12.65□□□□□ -0.38
ITGB8-203ENST00000477859 FAM50AQ14320 339 aaKnown RBP12.63□□□□□ -0.39
ITGB8-203ENST00000477859 POLR3GLQ9BT43 218 aa12.58□□□□□ -0.4
ITGB8-203ENST00000477859 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.4
ITGB8-203ENST00000477859 GTF3C3Q9Y5Q9 886 aa12.52□□□□□ -0.41
ITGB8-203ENST00000477859 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
ITGB8-203ENST00000477859 TRIM52Q96A61 297 aa12.49□□□□□ -0.41
ITGB8-203ENST00000477859 BAZ1BQ9UIG0 1483 aaKnown RBP12.45□□□□□ -0.42
ITGB8-203ENST00000477859 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
ITGB8-203ENST00000477859 NEFLP07196 543 aa12.43□□□□□ -0.42
ITGB8-203ENST00000477859 ZNF777Q9ULD5 760 aaPredicted RBP12.42□□□□□ -0.42
ITGB8-203ENST00000477859 ACIN1Q9UKV3 1341 aaKnown RBP12.42□□□□□ -0.42
ITGB8-203ENST00000477859 SLC4A1APQ9BWU0 796 aaKnown RBP12.4□□□□□ -0.42
ITGB8-203ENST00000477859 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
ITGB8-203ENST00000477859 DIEXFQ68CQ4 756 aaKnown RBP12.38□□□□□ -0.43
ITGB8-203ENST00000477859 SCAF1Q9H7N4 1312 aaKnown RBP12.38□□□□□ -0.43
ITGB8-203ENST00000477859 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
ITGB8-203ENST00000477859 CHMP7Q8WUX9 453 aaPredicted RBP12.37□□□□□ -0.43
ITGB8-203ENST00000477859 ERCC6Q03468 1493 aa12.35□□□□□ -0.43
ITGB8-203ENST00000477859 DCAF1Q9Y4B6 1507 aa12.33□□□□□ -0.44
ITGB8-203ENST00000477859 ZNF326Q5BKZ1 582 aaKnown RBP12.32□□□□□ -0.44
ITGB8-203ENST00000477859 PLPPR3Q6T4P5 718 aa12.32□□□□□ -0.44
ITGB8-203ENST00000477859 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
ITGB8-203ENST00000477859 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
ITGB8-203ENST00000477859 CDK11AQ9UQ88 783 aaPredicted RBP12.27□□□□□ -0.45
ITGB8-203ENST00000477859 BCANQ96GW7 911 aa12.24□□□□□ -0.45
ITGB8-203ENST00000477859 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
ITGB8-203ENST00000477859 MROH2BQ7Z745 1585 aa12.21□□□□□ -0.45
ITGB8-203ENST00000477859 CHIC2Q9UKJ5 165 aa12.16□□□□□ -0.46
ITGB8-203ENST00000477859 ESF1Q9H501 851 aaKnown RBP12.16□□□□□ -0.46
ITGB8-203ENST00000477859 KCNH8Q96L42 1107 aa12.16□□□□□ -0.46
ITGB8-203ENST00000477859 CHGAP10645 457 aaKnown RBP12.13□□□□□ -0.47
ITGB8-203ENST00000477859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.12□□□□□ -0.47
ITGB8-203ENST00000477859 CCDC88BA6NC98 1476 aa12.1□□□□□ -0.47
ITGB8-203ENST00000477859 SMARCA2P51531 1590 aa12.1□□□□□ -0.47
ITGB8-203ENST00000477859 CLIP1P30622 1438 aa12.1□□□□□ -0.47
ITGB8-203ENST00000477859 KIF27Q86VH2 1401 aa12.1□□□□□ -0.47
ITGB8-203ENST00000477859 WIZO95785 1651 aa12.1□□□□□ -0.47
ITGB8-203ENST00000477859 MTUS2Q5JR59 1369 aa12.09□□□□□ -0.47
ITGB8-203ENST00000477859 MYO15BQ96JP2 1530 aa12.08□□□□□ -0.47
ITGB8-203ENST00000477859 STAG3Q9UJ98 1225 aa12.08□□□□□ -0.48
ITGB8-203ENST00000477859 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
ITGB8-203ENST00000477859 GOLGA3Q08378 1498 aa12.05□□□□□ -0.48
ITGB8-203ENST00000477859 SENP3Q9H4L4 574 aaPredicted RBP12.04□□□□□ -0.48
ITGB8-203ENST00000477859 EIF4G1Q04637 1599 aaKnown RBP12.04□□□□□ -0.48
ITGB8-203ENST00000477859 ABCC8Q09428 1581 aa12.04□□□□□ -0.48
ITGB8-203ENST00000477859 CUX2O14529 1486 aa12.04□□□□□ -0.48
ITGB8-203ENST00000477859 PDS5BQ9NTI5 1447 aa12.01□□□□□ -0.49
ITGB8-203ENST00000477859 PLEKHD1A6NEE1 506 aa12.01□□□□□ -0.49
ITGB8-203ENST00000477859 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
ITGB8-203ENST00000477859 TSPY4P0CV99 314 aa12□□□□□ -0.49
ITGB8-203ENST00000477859 TSPY10P0CW01 314 aa12□□□□□ -0.49
ITGB8-203ENST00000477859 CEP162Q5TB80 1403 aa12□□□□□ -0.49
ITGB8-203ENST00000477859 SOGA1O94964 1423 aa11.99□□□□□ -0.49
ITGB8-203ENST00000477859 EEA1Q15075 1411 aa11.99□□□□□ -0.49
ITGB8-203ENST00000477859 RRP7BPQ9NSQ0 103 aa11.97□□□□□ -0.49
ITGB8-203ENST00000477859 TOP2AP11388 1531 aaKnown RBP11.97□□□□□ -0.49
ITGB8-203ENST00000477859 TDRD9Q8NDG6 1382 aaKnown RBP11.97□□□□□ -0.49
ITGB8-203ENST00000477859 ATAD2BQ9ULI0 1458 aa11.97□□□□□ -0.49
ITGB8-203ENST00000477859 BCL11AQ9H165 835 aa11.97□□□□□ -0.49
ITGB8-203ENST00000477859 SMARCA4P51532 1647 aa11.97□□□□□ -0.49
ITGB8-203ENST00000477859 AEBP2Q6ZN18 517 aaPredicted RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 298.6 ms