RNA–Protein interactions for RNA: ENST00000477126.1

TMEM42-202, Transcript of transmembrane protein 42, humanhuman

TSL 1 (best)

Gene TMEM42, Length 3,071 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-202ENST00000477126 NISCHQ9Y2I1 1504 aa39.65■■■■□ 3.94
TMEM42-202ENST00000477126 PPARGC1BQ86YN6 1023 aaKnown RBP37.07■■■■□ 3.52
TMEM42-202ENST00000477126 HRCP23327 699 aa37.02■■■■□ 3.52
TMEM42-202ENST00000477126 SUPT5HO00267 1087 aaKnown RBP36.79■■■■□ 3.48
TMEM42-202ENST00000477126 PCGF6Q9BYE7 350 aa36.79■■■■□ 3.48
TMEM42-202ENST00000477126 SHROOM4Q9ULL8 1493 aa36.77■■■■□ 3.48
TMEM42-202ENST00000477126 MYO15BQ96JP2 1530 aa35.77■■■■□ 3.32
TMEM42-202ENST00000477126 PELP1Q8IZL8 1130 aaKnown RBP35.67■■■■□ 3.3
TMEM42-202ENST00000477126 CHIC1Q5VXU3 224 aa35.55■■■■□ 3.28
TMEM42-202ENST00000477126 SCAF1Q9H7N4 1312 aaKnown RBP35.49■■■■□ 3.27
TMEM42-202ENST00000477126 LOC105371045A0A1W2PR82 267 aa35.4■■■■□ 3.26
TMEM42-202ENST00000477126 TRIM26Q12899 539 aaPredicted RBP34.85■■■■□ 3.17
TMEM42-202ENST00000477126 DCAF8L2P0C7V8 631 aa34.77■■■■□ 3.16
TMEM42-202ENST00000477126 EHMT2Q96KQ7 1210 aa34.77■■■■□ 3.16
TMEM42-202ENST00000477126 NEUROD1Q13562 356 aa34.5■■■■□ 3.11
TMEM42-202ENST00000477126 GTF3C3Q9Y5Q9 886 aa34.42■■■■□ 3.1
TMEM42-202ENST00000477126 DCAF1Q9Y4B6 1507 aa34.39■■■■□ 3.1
TMEM42-202ENST00000477126 ZEB1P37275 1124 aaPredicted RBP34.35■■■■□ 3.09
TMEM42-202ENST00000477126 ACIN1Q9UKV3 1341 aaKnown RBP34.32■■■■□ 3.08
TMEM42-202ENST00000477126 FAM9AQ8IZU1 332 aaPredicted RBP34.3■■■■□ 3.08
TMEM42-202ENST00000477126 MYT1Q01538 1121 aa34.12■■■■□ 3.05
TMEM42-202ENST00000477126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.02■■■■□ 3.04
TMEM42-202ENST00000477126 YTHDC1Q96MU7 727 aaKnown RBP34■■■■□ 3.03
TMEM42-202ENST00000477126 CCDC180Q9P1Z9 1646 aa33.92■■■■□ 3.02
TMEM42-202ENST00000477126 TTBK1Q5TCY1 1321 aaPredicted RBP33.87■■■■□ 3.01
TMEM42-202ENST00000477126 CENPBP07199 599 aaPredicted RBP33.86■■■■□ 3.01
TMEM42-202ENST00000477126 CCER1Q8TC90 406 aaPredicted RBP33.82■■■■□ 3
TMEM42-202ENST00000477126 DIEXFQ68CQ4 756 aaKnown RBP33.78■■■■□ 3
TMEM42-202ENST00000477126 TRIM41Q8WV44 630 aa33.52■■■□□ 2.96
TMEM42-202ENST00000477126 ZCCHC6Q5VYS8 1495 aaKnown RBP33.52■■■□□ 2.96
TMEM42-202ENST00000477126 MIER1Q8N108 512 aa32.99■■■□□ 2.87
TMEM42-202ENST00000477126 ZNF316A6NFI3 1004 aaPredicted RBP32.83■■■□□ 2.85
TMEM42-202ENST00000477126 BCL11AQ9H165 835 aa32.82■■■□□ 2.84
TMEM42-202ENST00000477126 HNRNPUL2Q1KMD3 747 aaKnown RBP32.49■■■□□ 2.79
TMEM42-202ENST00000477126 BCANQ96GW7 911 aa32.49■■■□□ 2.79
TMEM42-202ENST00000477126 CSRNP3Q8WYN3 585 aa32.46■■■□□ 2.79
TMEM42-202ENST00000477126 ANP32EQ9BTT0 268 aa32.46■■■□□ 2.79
TMEM42-202ENST00000477126 SUPT16HQ9Y5B9 1047 aaKnown RBP32.42■■■□□ 2.78
TMEM42-202ENST00000477126 TSHZ2Q9NRE2 1034 aa32.36■■■□□ 2.77
TMEM42-202ENST00000477126 RSF1Q96T23 1441 aaPredicted RBP32.12■■■□□ 2.73
TMEM42-202ENST00000477126 RB1CC1Q8TDY2 1594 aa32.09■■■□□ 2.73
TMEM42-202ENST00000477126 RANGAP1P46060 587 aaPredicted RBP32.05■■■□□ 2.72
TMEM42-202ENST00000477126 UBTFP17480 764 aaKnown RBP32.03■■■□□ 2.72
TMEM42-202ENST00000477126 KCNH8Q96L42 1107 aa31.91■■■□□ 2.7
TMEM42-202ENST00000477126 ITGAEP38570 1179 aa31.87■■■□□ 2.69
TMEM42-202ENST00000477126 FKBP8Q14318 412 aa31.82■■■□□ 2.68
TMEM42-202ENST00000477126 SCRIBQ14160 1630 aa31.82■■■□□ 2.68
TMEM42-202ENST00000477126 ABCC9O60706 1549 aa31.7■■■□□ 2.66
TMEM42-202ENST00000477126 CEP162Q5TB80 1403 aa31.69■■■□□ 2.66
TMEM42-202ENST00000477126 RBM19Q9Y4C8 960 aaKnown RBP31.63■■■□□ 2.65
TMEM42-202ENST00000477126 PRKCSHP14314 528 aaPredicted RBP31.56■■■□□ 2.64
TMEM42-202ENST00000477126 ERICH6Q7L0X2 663 aa31.44■■■□□ 2.62
TMEM42-202ENST00000477126 APLP2Q06481 763 aa31.43■■■□□ 2.62
TMEM42-202ENST00000477126 TRIM52Q96A61 297 aa31.43■■■□□ 2.62
TMEM42-202ENST00000477126 CLSPNQ9HAW4 1339 aa31.41■■■□□ 2.62
TMEM42-202ENST00000477126 MSH5O43196 834 aa31.4■■■□□ 2.62
TMEM42-202ENST00000477126 NEFLP07196 543 aa31.38■■■□□ 2.61
TMEM42-202ENST00000477126 SOGA1O94964 1423 aa31.38■■■□□ 2.61
TMEM42-202ENST00000477126 CECR2Q9BXF3 1484 aa31.36■■■□□ 2.61
TMEM42-202ENST00000477126 IRX6P78412 446 aaPredicted RBP31.34■■■□□ 2.61
TMEM42-202ENST00000477126 WRNQ14191 1432 aaPredicted RBP eCLIP31.31■■■□□ 2.6
TMEM42-202ENST00000477126 CCDC88BA6NC98 1476 aa31.3■■■□□ 2.6
TMEM42-202ENST00000477126 HIRIP3Q9BW71 556 aaPredicted RBP31.29■■■□□ 2.6
TMEM42-202ENST00000477126 ABCC8Q09428 1581 aa31.27■■■□□ 2.6
TMEM42-202ENST00000477126 DDX10Q13206 875 aaKnown RBP31.26■■■□□ 2.59
TMEM42-202ENST00000477126 RUSC2Q8N2Y8 1516 aa31.21■■■□□ 2.59
TMEM42-202ENST00000477126 TNIKQ9UKE5 1360 aa31.15■■■□□ 2.58
TMEM42-202ENST00000477126 MROH2BQ7Z745 1585 aa31.1■■■□□ 2.57
TMEM42-202ENST00000477126 ANO8Q9HCE9 1232 aaPredicted RBP31.05■■■□□ 2.56
TMEM42-202ENST00000477126 NBR1Q14596 966 aa31.05■■■□□ 2.56
TMEM42-202ENST00000477126 WIZO95785 1651 aa31■■■□□ 2.55
TMEM42-202ENST00000477126 DEKP35659 375 aaKnown RBP30.99■■■□□ 2.55
TMEM42-202ENST00000477126 NACADO15069 1562 aa30.96■■■□□ 2.55
TMEM42-202ENST00000477126 DHX57Q6P158 1386 aaKnown RBP30.95■■■□□ 2.55
TMEM42-202ENST00000477126 CCDC136Q96JN2 1154 aa30.88■■■□□ 2.53
TMEM42-202ENST00000477126 CDK11AQ9UQ88 783 aaPredicted RBP30.86■■■□□ 2.53
TMEM42-202ENST00000477126 RTN4Q9NQC3 1192 aaKnown RBP30.84■■■□□ 2.53
TMEM42-202ENST00000477126 CLIP1P30622 1438 aa30.81■■■□□ 2.52
TMEM42-202ENST00000477126 SIN3AQ96ST3 1273 aa30.75■■■□□ 2.51
TMEM42-202ENST00000477126 KANK4Q5T7N3 995 aaPredicted RBP30.75■■■□□ 2.51
TMEM42-202ENST00000477126 GOLGA3Q08378 1498 aa30.72■■■□□ 2.51
TMEM42-202ENST00000477126 SALL2Q9Y467 1007 aaPredicted RBP30.7■■■□□ 2.51
TMEM42-202ENST00000477126 HNRNPUQ00839 825 aaKnown RBP eCLIP30.67■■■□□ 2.5
TMEM42-202ENST00000477126 ANP32CO43423 234 aa30.65■■■□□ 2.5
TMEM42-202ENST00000477126 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.63■■■□□ 2.49
TMEM42-202ENST00000477126 B4GALNT3Q6L9W6 998 aa30.58■■■□□ 2.49
TMEM42-202ENST00000477126 FANCIQ9NVI1 1328 aa30.56■■■□□ 2.48
TMEM42-202ENST00000477126 VPS8Q8N3P4 1428 aa30.55■■■□□ 2.48
TMEM42-202ENST00000477126 PAK3O75914 559 aaPredicted RBP30.54■■■□□ 2.48
TMEM42-202ENST00000477126 CNGB1Q14028 1251 aaPredicted RBP30.52■■■□□ 2.48
TMEM42-202ENST00000477126 SENP3-EIF4A1A0A087X0R7 540 aa30.51■■■□□ 2.48
TMEM42-202ENST00000477126 IL27Q8NEV9 243 aa30.47■■■□□ 2.47
TMEM42-202ENST00000477126 BAZ1AQ9NRL2 1556 aaPredicted RBP30.43■■■□□ 2.46
TMEM42-202ENST00000477126 PPP1R15AO75807 674 aaPredicted RBP30.39■■■□□ 2.46
TMEM42-202ENST00000477126 NOP58Q9Y2X3 529 aaKnown RBP30.36■■■□□ 2.45
TMEM42-202ENST00000477126 BAZ1BQ9UIG0 1483 aaKnown RBP30.35■■■□□ 2.45
TMEM42-202ENST00000477126 EIF4G1Q04637 1599 aaKnown RBP30.35■■■□□ 2.45
TMEM42-202ENST00000477126 FAM50AQ14320 339 aaKnown RBP30.33■■■□□ 2.45
TMEM42-202ENST00000477126 RAPGEF2Q9Y4G8 1499 aa30.33■■■□□ 2.45
TMEM42-202ENST00000477126 EEA1Q15075 1411 aa30.32■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms