RNA–Protein interactions for RNA: ENST00000474456.1

RRAGC-202, Transcript of Ras related GTP binding C, humanhuman

TSL 2

Gene RRAGC, Length 2,492 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRAGC-202ENST00000474456 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
RRAGC-202ENST00000474456 AEBP2Q6ZN18 517 aaPredicted RBP15.41■□□□□ 0.06
RRAGC-202ENST00000474456 NISCHQ9Y2I1 1504 aa14.43□□□□□ -0.1
RRAGC-202ENST00000474456 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
RRAGC-202ENST00000474456 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
RRAGC-202ENST00000474456 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
RRAGC-202ENST00000474456 SENP3Q9H4L4 574 aaPredicted RBP12.79□□□□□ -0.36
RRAGC-202ENST00000474456 KCNA4P22459 653 aa12.65□□□□□ -0.38
RRAGC-202ENST00000474456 ADRA2BP18089 450 aa12.5□□□□□ -0.41
RRAGC-202ENST00000474456 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
RRAGC-202ENST00000474456 CCDC180Q9P1Z9 1646 aa12.28□□□□□ -0.44
RRAGC-202ENST00000474456 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.45
RRAGC-202ENST00000474456 ZCCHC6Q5VYS8 1495 aaKnown RBP12.21□□□□□ -0.45
RRAGC-202ENST00000474456 PPP6R1Q9UPN7 881 aa12.19□□□□□ -0.46
RRAGC-202ENST00000474456 SLC4A1APQ9BWU0 796 aaKnown RBP12.14□□□□□ -0.47
RRAGC-202ENST00000474456 SUPT5HO00267 1087 aaKnown RBP12.05□□□□□ -0.48
RRAGC-202ENST00000474456 SLC24A1O60721 1099 aa12.05□□□□□ -0.48
RRAGC-202ENST00000474456 DCAF8L2P0C7V8 631 aa11.93□□□□□ -0.5
RRAGC-202ENST00000474456 DCAF1Q9Y4B6 1507 aa11.87□□□□□ -0.51
RRAGC-202ENST00000474456 FOXD1Q16676 465 aa11.85□□□□□ -0.51
RRAGC-202ENST00000474456 PPP4R3CPQ6ZMV5 832 aa11.82□□□□□ -0.52
RRAGC-202ENST00000474456 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
RRAGC-202ENST00000474456 ZBTB22O15209 634 aa11.7□□□□□ -0.54
RRAGC-202ENST00000474456 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
RRAGC-202ENST00000474456 MYO15BQ96JP2 1530 aa11.66□□□□□ -0.54
RRAGC-202ENST00000474456 NPM3O75607 178 aaKnown RBP11.64□□□□□ -0.55
RRAGC-202ENST00000474456 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
RRAGC-202ENST00000474456 ABCC9O60706 1549 aa11.53□□□□□ -0.56
RRAGC-202ENST00000474456 SCRIBQ14160 1630 aa11.48□□□□□ -0.57
RRAGC-202ENST00000474456 RSF1Q96T23 1441 aaPredicted RBP11.42□□□□□ -0.58
RRAGC-202ENST00000474456 HRCP23327 699 aa11.39□□□□□ -0.59
RRAGC-202ENST00000474456 LOC105371045A0A1W2PR82 267 aa11.36□□□□□ -0.59
RRAGC-202ENST00000474456 PIAS4Q8N2W9 510 aaPredicted RBP11.36□□□□□ -0.59
RRAGC-202ENST00000474456 PCGF6Q9BYE7 350 aa11.36□□□□□ -0.59
RRAGC-202ENST00000474456 NACADO15069 1562 aa11.36□□□□□ -0.59
RRAGC-202ENST00000474456 RB1CC1Q8TDY2 1594 aa11.31□□□□□ -0.6
RRAGC-202ENST00000474456 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
RRAGC-202ENST00000474456 TRIM41Q8WV44 630 aa11.25□□□□□ -0.61
RRAGC-202ENST00000474456 CNKSR2Q8WXI2 1034 aa11.25□□□□□ -0.61
RRAGC-202ENST00000474456 CECR2Q9BXF3 1484 aa11.23□□□□□ -0.61
RRAGC-202ENST00000474456 MROH2BQ7Z745 1585 aa11.21□□□□□ -0.62
RRAGC-202ENST00000474456 TRIM26Q12899 539 aaPredicted RBP11.18□□□□□ -0.62
RRAGC-202ENST00000474456 WIZO95785 1651 aa11.14□□□□□ -0.63
RRAGC-202ENST00000474456 FAM9AQ8IZU1 332 aaPredicted RBP11.12□□□□□ -0.63
RRAGC-202ENST00000474456 PPARGC1BQ86YN6 1023 aaKnown RBP11.11□□□□□ -0.63
RRAGC-202ENST00000474456 BAZ1AQ9NRL2 1556 aaPredicted RBP11.1□□□□□ -0.63
RRAGC-202ENST00000474456 DNAJC5BQ9UF47 199 aa11.08□□□□□ -0.64
RRAGC-202ENST00000474456 FKBP8Q14318 412 aa11.07□□□□□ -0.64
RRAGC-202ENST00000474456 EIF4G1Q04637 1599 aaKnown RBP11.01□□□□□ -0.65
RRAGC-202ENST00000474456 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
RRAGC-202ENST00000474456 SMARCA4P51532 1647 aa10.99□□□□□ -0.65
RRAGC-202ENST00000474456 SCAF1Q9H7N4 1312 aaKnown RBP10.99□□□□□ -0.65
RRAGC-202ENST00000474456 ZEB1P37275 1124 aaPredicted RBP10.97□□□□□ -0.65
RRAGC-202ENST00000474456 UNC13AQ9UPW8 1703 aa10.95□□□□□ -0.66
RRAGC-202ENST00000474456 CCDC88BA6NC98 1476 aa10.94□□□□□ -0.66
RRAGC-202ENST00000474456 SMARCA2P51531 1590 aa10.92□□□□□ -0.66
RRAGC-202ENST00000474456 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
RRAGC-202ENST00000474456 PABPN1Q86U42 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
RRAGC-202ENST00000474456 BICRAQ9NZM4 1560 aa10.84□□□□□ -0.67
RRAGC-202ENST00000474456 MAPK8IP2Q13387 824 aaPredicted RBP10.82□□□□□ -0.68
RRAGC-202ENST00000474456 RNF216Q9NWF9 866 aaPredicted RBP10.81□□□□□ -0.68
RRAGC-202ENST00000474456 SOGA1O94964 1423 aa10.79□□□□□ -0.68
RRAGC-202ENST00000474456 EEA1Q15075 1411 aa10.79□□□□□ -0.68
RRAGC-202ENST00000474456 SLC4A2P04920 1241 aa10.79□□□□□ -0.68
RRAGC-202ENST00000474456 PEG3Q9GZU2 1588 aa10.79□□□□□ -0.68
RRAGC-202ENST00000474456 WRNQ14191 1432 aaPredicted RBP eCLIP10.78□□□□□ -0.68
RRAGC-202ENST00000474456 ATXN8OSP0DMR3 200 aa10.77□□□□□ -0.69
RRAGC-202ENST00000474456 CEP162Q5TB80 1403 aa10.77□□□□□ -0.69
RRAGC-202ENST00000474456 TNIKQ9UKE5 1360 aa10.77□□□□□ -0.69
RRAGC-202ENST00000474456 RUSC2Q8N2Y8 1516 aa10.73□□□□□ -0.69
RRAGC-202ENST00000474456 PLCB2Q00722 1185 aa10.73□□□□□ -0.69
RRAGC-202ENST00000474456 UBTFP17480 764 aaKnown RBP10.71□□□□□ -0.69
RRAGC-202ENST00000474456 GOLGA3Q08378 1498 aa10.71□□□□□ -0.7
RRAGC-202ENST00000474456 ATAD2BQ9ULI0 1458 aa10.71□□□□□ -0.7
RRAGC-202ENST00000474456 PRKCSHP14314 528 aaPredicted RBP10.7□□□□□ -0.7
RRAGC-202ENST00000474456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.7□□□□□ -0.7
RRAGC-202ENST00000474456 CCER1Q8TC90 406 aaPredicted RBP10.69□□□□□ -0.7
RRAGC-202ENST00000474456 BAZ1BQ9UIG0 1483 aaKnown RBP10.68□□□□□ -0.7
RRAGC-202ENST00000474456 SYNJ1O43426 1573 aa10.66□□□□□ -0.7
RRAGC-202ENST00000474456 TTBK1Q5TCY1 1321 aaPredicted RBP10.66□□□□□ -0.7
RRAGC-202ENST00000474456 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
RRAGC-202ENST00000474456 PELP1Q8IZL8 1130 aaKnown RBP10.65□□□□□ -0.7
RRAGC-202ENST00000474456 CEP164Q9UPV0 1460 aa10.64□□□□□ -0.71
RRAGC-202ENST00000474456 KIF21BO75037 1637 aa10.63□□□□□ -0.71
RRAGC-202ENST00000474456 BCANQ96GW7 911 aa10.58□□□□□ -0.72
RRAGC-202ENST00000474456 CLIP1P30622 1438 aa10.57□□□□□ -0.72
RRAGC-202ENST00000474456 HAP1P54257 671 aaPredicted RBP10.57□□□□□ -0.72
RRAGC-202ENST00000474456 TAOK2Q9UL54 1235 aa10.56□□□□□ -0.72
RRAGC-202ENST00000474456 TOP2BQ02880 1626 aa10.55□□□□□ -0.72
RRAGC-202ENST00000474456 RAPGEF2Q9Y4G8 1499 aa10.54□□□□□ -0.72
RRAGC-202ENST00000474456 HOXD11P31277 338 aaPredicted RBP10.53□□□□□ -0.72
RRAGC-202ENST00000474456 VPS8Q8N3P4 1428 aa10.53□□□□□ -0.72
RRAGC-202ENST00000474456 HMGXB3Q12766 1538 aa10.51□□□□□ -0.73
RRAGC-202ENST00000474456 BIVM-ERCC5R4GMW8 1640 aa10.51□□□□□ -0.73
RRAGC-202ENST00000474456 NCAPD3P42695 1498 aa10.5□□□□□ -0.73
RRAGC-202ENST00000474456 APLP2Q06481 763 aa10.49□□□□□ -0.73
RRAGC-202ENST00000474456 DIEXFQ68CQ4 756 aaKnown RBP10.48□□□□□ -0.73
RRAGC-202ENST00000474456 HNRNPUL2Q1KMD3 747 aaKnown RBP10.46□□□□□ -0.73
RRAGC-202ENST00000474456 MSH5O43196 834 aa10.46□□□□□ -0.74
RRAGC-202ENST00000474456 RANGAP1P46060 587 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms