RNA–Protein interactions for RNA: ENST00000466030.1

RAPGEF4-207, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene RAPGEF4, Length 493 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-207ENST00000466030 AEBP2Q6ZN18 517 aaPredicted RBP22.41■■□□□ 1.18
RAPGEF4-207ENST00000466030 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
RAPGEF4-207ENST00000466030 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
RAPGEF4-207ENST00000466030 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF4-207ENST00000466030 NISCHQ9Y2I1 1504 aa18.87■□□□□ 0.61
RAPGEF4-207ENST00000466030 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
RAPGEF4-207ENST00000466030 FOXD1Q16676 465 aa17.6■□□□□ 0.41
RAPGEF4-207ENST00000466030 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
RAPGEF4-207ENST00000466030 ADRA2BP18089 450 aa16.88■□□□□ 0.29
RAPGEF4-207ENST00000466030 CCDC180Q9P1Z9 1646 aa16.83■□□□□ 0.28
RAPGEF4-207ENST00000466030 ABCC9O60706 1549 aa16.66■□□□□ 0.26
RAPGEF4-207ENST00000466030 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
RAPGEF4-207ENST00000466030 MSH5O43196 834 aa16.15■□□□□ 0.18
RAPGEF4-207ENST00000466030 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
RAPGEF4-207ENST00000466030 RB1CC1Q8TDY2 1594 aa15.89■□□□□ 0.13
RAPGEF4-207ENST00000466030 KCNA4P22459 653 aa15.88■□□□□ 0.13
RAPGEF4-207ENST00000466030 NACADO15069 1562 aa15.83■□□□□ 0.13
RAPGEF4-207ENST00000466030 DCAF8L2P0C7V8 631 aa15.79■□□□□ 0.12
RAPGEF4-207ENST00000466030 ZCCHC6Q5VYS8 1495 aaKnown RBP15.69■□□□□ 0.1
RAPGEF4-207ENST00000466030 UNC13AQ9UPW8 1703 aa15.68■□□□□ 0.1
RAPGEF4-207ENST00000466030 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
RAPGEF4-207ENST00000466030 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
RAPGEF4-207ENST00000466030 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
RAPGEF4-207ENST00000466030 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
RAPGEF4-207ENST00000466030 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
RAPGEF4-207ENST00000466030 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
RAPGEF4-207ENST00000466030 SCRIBQ14160 1630 aa15.39■□□□□ 0.05
RAPGEF4-207ENST00000466030 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
RAPGEF4-207ENST00000466030 MAPK8IP2Q13387 824 aaPredicted RBP15.32■□□□□ 0.04
RAPGEF4-207ENST00000466030 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
RAPGEF4-207ENST00000466030 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
RAPGEF4-207ENST00000466030 SLC4A1APQ9BWU0 796 aaKnown RBP15.18■□□□□ 0.02
RAPGEF4-207ENST00000466030 CNKSR2Q8WXI2 1034 aa15.15■□□□□ 0.02
RAPGEF4-207ENST00000466030 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
RAPGEF4-207ENST00000466030 NCBP3Q53F19 620 aaKnown RBP15.1■□□□□ 0.01
RAPGEF4-207ENST00000466030 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
RAPGEF4-207ENST00000466030 CC2D2AQ9P2K1 1620 aa15.07■□□□□ 0
RAPGEF4-207ENST00000466030 NPM3O75607 178 aaKnown RBP14.99□□□□□ -0.01
RAPGEF4-207ENST00000466030 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.01
RAPGEF4-207ENST00000466030 RNF216Q9NWF9 866 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF4-207ENST00000466030 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF4-207ENST00000466030 POTEDQ86YR6 584 aa14.73□□□□□ -0.05
RAPGEF4-207ENST00000466030 ZBTB22O15209 634 aa14.72□□□□□ -0.05
RAPGEF4-207ENST00000466030 SMARCA4P51532 1647 aa14.69□□□□□ -0.06
RAPGEF4-207ENST00000466030 ATAD2BQ9ULI0 1458 aa14.64□□□□□ -0.07
RAPGEF4-207ENST00000466030 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
RAPGEF4-207ENST00000466030 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
RAPGEF4-207ENST00000466030 MROH2BQ7Z745 1585 aa14.58□□□□□ -0.08
RAPGEF4-207ENST00000466030 SMARCA2P51531 1590 aa14.56□□□□□ -0.08
RAPGEF4-207ENST00000466030 HMGXB3Q12766 1538 aa14.55□□□□□ -0.08
RAPGEF4-207ENST00000466030 PEG3Q9GZU2 1588 aa14.53□□□□□ -0.08
RAPGEF4-207ENST00000466030 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
RAPGEF4-207ENST00000466030 WIZO95785 1651 aa14.42□□□□□ -0.1
RAPGEF4-207ENST00000466030 NESP48681 1621 aa14.41□□□□□ -0.1
RAPGEF4-207ENST00000466030 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF4-207ENST00000466030 ERCC6Q03468 1493 aa14.3□□□□□ -0.12
RAPGEF4-207ENST00000466030 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
RAPGEF4-207ENST00000466030 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
RAPGEF4-207ENST00000466030 SLC24A1O60721 1099 aa14.24□□□□□ -0.13
RAPGEF4-207ENST00000466030 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
RAPGEF4-207ENST00000466030 RTN4Q9NQC3 1192 aaKnown RBP14.23□□□□□ -0.13
RAPGEF4-207ENST00000466030 CUX2O14529 1486 aa14.22□□□□□ -0.13
RAPGEF4-207ENST00000466030 SLC4A2P04920 1241 aa14.21□□□□□ -0.13
RAPGEF4-207ENST00000466030 THOC2Q8NI27 1593 aaKnown RBP14.21□□□□□ -0.14
RAPGEF4-207ENST00000466030 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
RAPGEF4-207ENST00000466030 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
RAPGEF4-207ENST00000466030 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
RAPGEF4-207ENST00000466030 PDS5BQ9NTI5 1447 aa14.14□□□□□ -0.15
RAPGEF4-207ENST00000466030 CFTRP13569 1480 aa14.09□□□□□ -0.15
RAPGEF4-207ENST00000466030 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
RAPGEF4-207ENST00000466030 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
RAPGEF4-207ENST00000466030 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
RAPGEF4-207ENST00000466030 WDR62O43379 1518 aa14.02□□□□□ -0.16
RAPGEF4-207ENST00000466030 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
RAPGEF4-207ENST00000466030 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
RAPGEF4-207ENST00000466030 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
RAPGEF4-207ENST00000466030 AMER1Q5JTC6 1135 aaPredicted RBP14□□□□□ -0.17
RAPGEF4-207ENST00000466030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.17
RAPGEF4-207ENST00000466030 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
RAPGEF4-207ENST00000466030 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
RAPGEF4-207ENST00000466030 U3KPZ7 1027 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF4-207ENST00000466030 TOPBP1Q92547 1522 aa13.82□□□□□ -0.2
RAPGEF4-207ENST00000466030 SUPT5HO00267 1087 aaKnown RBP13.82□□□□□ -0.2
RAPGEF4-207ENST00000466030 MYCNP04198 464 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF4-207ENST00000466030 DNMBPQ6XZF7 1577 aa13.77□□□□□ -0.21
RAPGEF4-207ENST00000466030 ZNF608Q9ULD9 1512 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF4-207ENST00000466030 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
RAPGEF4-207ENST00000466030 FKBP8Q14318 412 aa13.72□□□□□ -0.21
RAPGEF4-207ENST00000466030 ABCC8Q09428 1581 aa13.71□□□□□ -0.21
RAPGEF4-207ENST00000466030 TARBP1Q13395 1621 aaKnown RBP13.71□□□□□ -0.22
RAPGEF4-207ENST00000466030 C1QBPQ07021 282 aaKnown RBP13.7□□□□□ -0.22
RAPGEF4-207ENST00000466030 POLA1P09884 1462 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF4-207ENST00000466030 CUX1P39880 1505 aa13.68□□□□□ -0.22
RAPGEF4-207ENST00000466030 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
RAPGEF4-207ENST00000466030 EIF4G3O43432 1585 aaKnown RBP13.66□□□□□ -0.22
RAPGEF4-207ENST00000466030 AQRO60306 1485 aaKnown RBP eCLIP13.64□□□□□ -0.23
RAPGEF4-207ENST00000466030 FGD5Q6ZNL6 1462 aa13.63□□□□□ -0.23
RAPGEF4-207ENST00000466030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
RAPGEF4-207ENST00000466030 HNRNPUL2Q1KMD3 747 aaKnown RBP13.62□□□□□ -0.23
RAPGEF4-207ENST00000466030 SOGA1O94964 1423 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms