RNA–Protein interactions for RNA: ENST00000464876.5

ABCA2-212, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 3,438 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-212ENST00000464876 NISCHQ9Y2I1 1504 aa26.61■■□□□ 1.85
ABCA2-212ENST00000464876 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
ABCA2-212ENST00000464876 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
ABCA2-212ENST00000464876 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
ABCA2-212ENST00000464876 PCGF6Q9BYE7 350 aa23.07■■□□□ 1.28
ABCA2-212ENST00000464876 HRCP23327 699 aa23.03■■□□□ 1.28
ABCA2-212ENST00000464876 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.26
ABCA2-212ENST00000464876 PPARGC1BQ86YN6 1023 aaKnown RBP22.86■■□□□ 1.25
ABCA2-212ENST00000464876 MYO15BQ96JP2 1530 aa22.79■■□□□ 1.24
ABCA2-212ENST00000464876 LOC105371045A0A1W2PR82 267 aa22.57■■□□□ 1.2
ABCA2-212ENST00000464876 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
ABCA2-212ENST00000464876 ZCCHC6Q5VYS8 1495 aaKnown RBP22.46■■□□□ 1.19
ABCA2-212ENST00000464876 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
ABCA2-212ENST00000464876 TRIM26Q12899 539 aaPredicted RBP22.15■■□□□ 1.14
ABCA2-212ENST00000464876 FAM9AQ8IZU1 332 aaPredicted RBP22.11■■□□□ 1.13
ABCA2-212ENST00000464876 DCAF1Q9Y4B6 1507 aa22.04■■□□□ 1.12
ABCA2-212ENST00000464876 ABCC9O60706 1549 aa21.9■■□□□ 1.1
ABCA2-212ENST00000464876 TRIM41Q8WV44 630 aa21.87■■□□□ 1.09
ABCA2-212ENST00000464876 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
ABCA2-212ENST00000464876 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
ABCA2-212ENST00000464876 TTBK1Q5TCY1 1321 aaPredicted RBP21.58■■□□□ 1.04
ABCA2-212ENST00000464876 PELP1Q8IZL8 1130 aaKnown RBP21.57■■□□□ 1.04
ABCA2-212ENST00000464876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
ABCA2-212ENST00000464876 SCRIBQ14160 1630 aa21.5■■□□□ 1.03
ABCA2-212ENST00000464876 CCER1Q8TC90 406 aaPredicted RBP21.48■■□□□ 1.03
ABCA2-212ENST00000464876 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
ABCA2-212ENST00000464876 NEUROD1Q13562 356 aa21.26■□□□□ 0.99
ABCA2-212ENST00000464876 ACIN1Q9UKV3 1341 aaKnown RBP21.22■□□□□ 0.99
ABCA2-212ENST00000464876 RB1CC1Q8TDY2 1594 aa21.22■□□□□ 0.99
ABCA2-212ENST00000464876 GTF3C3Q9Y5Q9 886 aa21.19■□□□□ 0.98
ABCA2-212ENST00000464876 DIEXFQ68CQ4 756 aaKnown RBP21.19■□□□□ 0.98
ABCA2-212ENST00000464876 CENPBP07199 599 aaPredicted RBP21.14■□□□□ 0.97
ABCA2-212ENST00000464876 YTHDC1Q96MU7 727 aaKnown RBP21.12■□□□□ 0.97
ABCA2-212ENST00000464876 NACADO15069 1562 aa21.12■□□□□ 0.97
ABCA2-212ENST00000464876 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
ABCA2-212ENST00000464876 CECR2Q9BXF3 1484 aa20.99■□□□□ 0.95
ABCA2-212ENST00000464876 UBTFP17480 764 aaKnown RBP20.92■□□□□ 0.94
ABCA2-212ENST00000464876 HNRNPUL2Q1KMD3 747 aaKnown RBP20.83■□□□□ 0.92
ABCA2-212ENST00000464876 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.92
ABCA2-212ENST00000464876 RANGAP1P46060 587 aaPredicted RBP20.79■□□□□ 0.92
ABCA2-212ENST00000464876 ZNF316A6NFI3 1004 aaPredicted RBP20.78■□□□□ 0.92
ABCA2-212ENST00000464876 WIZO95785 1651 aa20.71■□□□□ 0.91
ABCA2-212ENST00000464876 CEP162Q5TB80 1403 aa20.67■□□□□ 0.9
ABCA2-212ENST00000464876 MIER1Q8N108 512 aa20.67■□□□□ 0.9
ABCA2-212ENST00000464876 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
ABCA2-212ENST00000464876 CCDC88BA6NC98 1476 aa20.61■□□□□ 0.89
ABCA2-212ENST00000464876 CSRNP3Q8WYN3 585 aa20.6■□□□□ 0.89
ABCA2-212ENST00000464876 SOGA1O94964 1423 aa20.6■□□□□ 0.89
ABCA2-212ENST00000464876 APLP2Q06481 763 aa20.56■□□□□ 0.88
ABCA2-212ENST00000464876 UNC13AQ9UPW8 1703 aa20.55■□□□□ 0.88
ABCA2-212ENST00000464876 MYT1Q01538 1121 aa20.55■□□□□ 0.88
ABCA2-212ENST00000464876 TNIKQ9UKE5 1360 aa20.46■□□□□ 0.87
ABCA2-212ENST00000464876 RUSC2Q8N2Y8 1516 aa20.45■□□□□ 0.86
ABCA2-212ENST00000464876 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.86
ABCA2-212ENST00000464876 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
ABCA2-212ENST00000464876 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
ABCA2-212ENST00000464876 SMARCA4P51532 1647 aa20.33■□□□□ 0.84
ABCA2-212ENST00000464876 GOLGA3Q08378 1498 aa20.28■□□□□ 0.84
ABCA2-212ENST00000464876 ITGAEP38570 1179 aa20.25■□□□□ 0.83
ABCA2-212ENST00000464876 CLIP1P30622 1438 aa20.23■□□□□ 0.83
ABCA2-212ENST00000464876 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
ABCA2-212ENST00000464876 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
ABCA2-212ENST00000464876 EEA1Q15075 1411 aa20.19■□□□□ 0.82
ABCA2-212ENST00000464876 SMARCA2P51531 1590 aa20.15■□□□□ 0.82
ABCA2-212ENST00000464876 BCANQ96GW7 911 aa20.14■□□□□ 0.81
ABCA2-212ENST00000464876 SUPT16HQ9Y5B9 1047 aaKnown RBP20.12■□□□□ 0.81
ABCA2-212ENST00000464876 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
ABCA2-212ENST00000464876 VPS8Q8N3P4 1428 aa20.05■□□□□ 0.8
ABCA2-212ENST00000464876 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.8
ABCA2-212ENST00000464876 KANK4Q5T7N3 995 aaPredicted RBP19.99■□□□□ 0.79
ABCA2-212ENST00000464876 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
ABCA2-212ENST00000464876 RAPGEF2Q9Y4G8 1499 aa19.99■□□□□ 0.79
ABCA2-212ENST00000464876 KCNH8Q96L42 1107 aa19.99■□□□□ 0.79
ABCA2-212ENST00000464876 DHX57Q6P158 1386 aaKnown RBP19.94■□□□□ 0.78
ABCA2-212ENST00000464876 ATP1B4Q9UN42 357 aaPredicted RBP19.93■□□□□ 0.78
ABCA2-212ENST00000464876 TSHZ2Q9NRE2 1034 aa19.92■□□□□ 0.78
ABCA2-212ENST00000464876 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
ABCA2-212ENST00000464876 FKBP8Q14318 412 aa19.87■□□□□ 0.77
ABCA2-212ENST00000464876 DDX10Q13206 875 aaKnown RBP19.86■□□□□ 0.77
ABCA2-212ENST00000464876 HIRIP3Q9BW71 556 aaPredicted RBP19.86■□□□□ 0.77
ABCA2-212ENST00000464876 CLSPNQ9HAW4 1339 aa19.83■□□□□ 0.77
ABCA2-212ENST00000464876 KIF21BO75037 1637 aa19.82■□□□□ 0.76
ABCA2-212ENST00000464876 NEFLP07196 543 aa19.78■□□□□ 0.76
ABCA2-212ENST00000464876 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
ABCA2-212ENST00000464876 FAM50AQ14320 339 aaKnown RBP19.77■□□□□ 0.76
ABCA2-212ENST00000464876 ANP32EQ9BTT0 268 aa19.77■□□□□ 0.76
ABCA2-212ENST00000464876 TRIM52Q96A61 297 aa19.77■□□□□ 0.76
ABCA2-212ENST00000464876 SIN3AQ96ST3 1273 aa19.74■□□□□ 0.75
ABCA2-212ENST00000464876 P3H3Q8IVL6 736 aa19.69■□□□□ 0.74
ABCA2-212ENST00000464876 CCNB3Q8WWL7 1395 aa19.69■□□□□ 0.74
ABCA2-212ENST00000464876 RAB3GAP2Q9H2M9 1393 aa19.63■□□□□ 0.73
ABCA2-212ENST00000464876 NCAPD3P42695 1498 aa19.63■□□□□ 0.73
ABCA2-212ENST00000464876 ARAP1Q96P48 1450 aa19.62■□□□□ 0.73
ABCA2-212ENST00000464876 ANP32CO43423 234 aa19.59■□□□□ 0.73
ABCA2-212ENST00000464876 DNAJC5BQ9UF47 199 aa19.57■□□□□ 0.72
ABCA2-212ENST00000464876 IRX6P78412 446 aaPredicted RBP19.56■□□□□ 0.72
ABCA2-212ENST00000464876 RBM19Q9Y4C8 960 aaKnown RBP19.54■□□□□ 0.72
ABCA2-212ENST00000464876 BCL11AQ9H165 835 aa19.53■□□□□ 0.72
ABCA2-212ENST00000464876 RRBP1Q9P2E9 1410 aaKnown RBP19.52■□□□□ 0.72
ABCA2-212ENST00000464876 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms