RNA–Protein interactions for RNA: ENST00000462545.5

SPEG-214, Transcript of SPEG complex locus, humanhuman

TSL 2

Gene SPEG, Length 3,487 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-214ENST00000462545 NISCHQ9Y2I1 1504 aa24.48■■□□□ 1.51
SPEG-214ENST00000462545 PELP1Q8IZL8 1130 aaKnown RBP21.15■□□□□ 0.98
SPEG-214ENST00000462545 SHROOM4Q9ULL8 1493 aa20.99■□□□□ 0.95
SPEG-214ENST00000462545 ZCCHC6Q5VYS8 1495 aaKnown RBP20.7■□□□□ 0.9
SPEG-214ENST00000462545 SUPT5HO00267 1087 aaKnown RBP20.7■□□□□ 0.9
SPEG-214ENST00000462545 CCDC180Q9P1Z9 1646 aa20.69■□□□□ 0.9
SPEG-214ENST00000462545 MYT1Q01538 1121 aa20.59■□□□□ 0.89
SPEG-214ENST00000462545 HRCP23327 699 aa20.43■□□□□ 0.86
SPEG-214ENST00000462545 DCAF8L2P0C7V8 631 aa20.39■□□□□ 0.85
SPEG-214ENST00000462545 PPARGC1BQ86YN6 1023 aaKnown RBP20.27■□□□□ 0.84
SPEG-214ENST00000462545 CHIC1Q5VXU3 224 aa20.17■□□□□ 0.82
SPEG-214ENST00000462545 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
SPEG-214ENST00000462545 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
SPEG-214ENST00000462545 PCGF6Q9BYE7 350 aa19.94■□□□□ 0.78
SPEG-214ENST00000462545 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
SPEG-214ENST00000462545 LOC105371045A0A1W2PR82 267 aa19.58■□□□□ 0.72
SPEG-214ENST00000462545 ABCC9O60706 1549 aa19.53■□□□□ 0.72
SPEG-214ENST00000462545 SCRIBQ14160 1630 aa19.44■□□□□ 0.7
SPEG-214ENST00000462545 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
SPEG-214ENST00000462545 TTBK1Q5TCY1 1321 aaPredicted RBP19.43■□□□□ 0.7
SPEG-214ENST00000462545 BCL11AQ9H165 835 aa19.3■□□□□ 0.68
SPEG-214ENST00000462545 TRIM26Q12899 539 aaPredicted RBP19.29■□□□□ 0.68
SPEG-214ENST00000462545 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
SPEG-214ENST00000462545 GTF3C3Q9Y5Q9 886 aa19.24■□□□□ 0.67
SPEG-214ENST00000462545 RB1CC1Q8TDY2 1594 aa19.21■□□□□ 0.67
SPEG-214ENST00000462545 PRKCSHP14314 528 aaPredicted RBP19.2■□□□□ 0.66
SPEG-214ENST00000462545 ACIN1Q9UKV3 1341 aaKnown RBP19.16■□□□□ 0.66
SPEG-214ENST00000462545 NACADO15069 1562 aa19.16■□□□□ 0.66
SPEG-214ENST00000462545 CENPBP07199 599 aaPredicted RBP19.14■□□□□ 0.65
SPEG-214ENST00000462545 NEUROD1Q13562 356 aa19.12■□□□□ 0.65
SPEG-214ENST00000462545 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
SPEG-214ENST00000462545 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
SPEG-214ENST00000462545 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.64
SPEG-214ENST00000462545 ZEB1P37275 1124 aaPredicted RBP18.95■□□□□ 0.62
SPEG-214ENST00000462545 EHMT2Q96KQ7 1210 aa18.94■□□□□ 0.62
SPEG-214ENST00000462545 WIZO95785 1651 aa18.9■□□□□ 0.62
SPEG-214ENST00000462545 BAZ1AQ9NRL2 1556 aaPredicted RBP18.79■□□□□ 0.6
SPEG-214ENST00000462545 ERICH6Q7L0X2 663 aa18.79■□□□□ 0.6
SPEG-214ENST00000462545 YTHDC1Q96MU7 727 aaKnown RBP18.68■□□□□ 0.58
SPEG-214ENST00000462545 EIF4G1Q04637 1599 aaKnown RBP18.65■□□□□ 0.58
SPEG-214ENST00000462545 TOP2AP11388 1531 aaKnown RBP18.62■□□□□ 0.57
SPEG-214ENST00000462545 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
SPEG-214ENST00000462545 CCDC88BA6NC98 1476 aa18.59■□□□□ 0.57
SPEG-214ENST00000462545 SMARCA4P51532 1647 aa18.58■□□□□ 0.57
SPEG-214ENST00000462545 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
SPEG-214ENST00000462545 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
SPEG-214ENST00000462545 SMARCA2P51531 1590 aa18.52■□□□□ 0.55
SPEG-214ENST00000462545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
SPEG-214ENST00000462545 DIEXFQ68CQ4 756 aaKnown RBP18.47■□□□□ 0.55
SPEG-214ENST00000462545 CCER1Q8TC90 406 aaPredicted RBP18.47■□□□□ 0.55
SPEG-214ENST00000462545 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
SPEG-214ENST00000462545 SOGA1O94964 1423 aa18.43■□□□□ 0.54
SPEG-214ENST00000462545 WRNQ14191 1432 aaPredicted RBP eCLIP18.42■□□□□ 0.54
SPEG-214ENST00000462545 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
SPEG-214ENST00000462545 TNIKQ9UKE5 1360 aa18.4■□□□□ 0.54
SPEG-214ENST00000462545 EEA1Q15075 1411 aa18.39■□□□□ 0.53
SPEG-214ENST00000462545 PABPN1Q86U42 306 aaKnown RBP eCLIP18.39■□□□□ 0.53
SPEG-214ENST00000462545 UBTFP17480 764 aaKnown RBP18.37■□□□□ 0.53
SPEG-214ENST00000462545 RUSC2Q8N2Y8 1516 aa18.32■□□□□ 0.52
SPEG-214ENST00000462545 APLP2Q06481 763 aa18.29■□□□□ 0.52
SPEG-214ENST00000462545 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.51
SPEG-214ENST00000462545 GOLGA3Q08378 1498 aa18.25■□□□□ 0.51
SPEG-214ENST00000462545 PEG3Q9GZU2 1588 aa18.22■□□□□ 0.51
SPEG-214ENST00000462545 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.49
SPEG-214ENST00000462545 ATAD2BQ9ULI0 1458 aa18.12■□□□□ 0.49
SPEG-214ENST00000462545 SYNJ1O43426 1573 aa18.11■□□□□ 0.49
SPEG-214ENST00000462545 ANO8Q9HCE9 1232 aaPredicted RBP18.09■□□□□ 0.49
SPEG-214ENST00000462545 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.49
SPEG-214ENST00000462545 TSHZ2Q9NRE2 1034 aa18.07■□□□□ 0.48
SPEG-214ENST00000462545 CLIP1P30622 1438 aa18.07■□□□□ 0.48
SPEG-214ENST00000462545 KIF21BO75037 1637 aa18.06■□□□□ 0.48
SPEG-214ENST00000462545 HNRNPUL2Q1KMD3 747 aaKnown RBP18.02■□□□□ 0.47
SPEG-214ENST00000462545 ZNF316A6NFI3 1004 aaPredicted RBP18■□□□□ 0.47
SPEG-214ENST00000462545 VPS8Q8N3P4 1428 aa17.99■□□□□ 0.47
SPEG-214ENST00000462545 RAPGEF2Q9Y4G8 1499 aa17.97■□□□□ 0.47
SPEG-214ENST00000462545 RANGAP1P46060 587 aaPredicted RBP17.95■□□□□ 0.46
SPEG-214ENST00000462545 SUPT16HQ9Y5B9 1047 aaKnown RBP17.91■□□□□ 0.46
SPEG-214ENST00000462545 CCDC136Q96JN2 1154 aa17.9■□□□□ 0.46
SPEG-214ENST00000462545 TOP2BQ02880 1626 aa17.89■□□□□ 0.45
SPEG-214ENST00000462545 BCANQ96GW7 911 aa17.89■□□□□ 0.45
SPEG-214ENST00000462545 MIER1Q8N108 512 aa17.86■□□□□ 0.45
SPEG-214ENST00000462545 BIVM-ERCC5R4GMW8 1640 aa17.79■□□□□ 0.44
SPEG-214ENST00000462545 PRXQ9BXM0 1461 aa17.79■□□□□ 0.44
SPEG-214ENST00000462545 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.44
SPEG-214ENST00000462545 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
SPEG-214ENST00000462545 SALL2Q9Y467 1007 aaPredicted RBP17.75■□□□□ 0.43
SPEG-214ENST00000462545 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
SPEG-214ENST00000462545 KIF27Q86VH2 1401 aa17.71■□□□□ 0.43
SPEG-214ENST00000462545 ARAP1Q96P48 1450 aa17.7■□□□□ 0.42
SPEG-214ENST00000462545 EIF5BO60841 1220 aaKnown RBP17.7■□□□□ 0.42
SPEG-214ENST00000462545 CUX1P39880 1505 aa17.7■□□□□ 0.42
SPEG-214ENST00000462545 KANK4Q5T7N3 995 aaPredicted RBP17.7■□□□□ 0.42
SPEG-214ENST00000462545 CLSPNQ9HAW4 1339 aa17.69■□□□□ 0.42
SPEG-214ENST00000462545 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
SPEG-214ENST00000462545 CFTRP13569 1480 aa17.65■□□□□ 0.42
SPEG-214ENST00000462545 DEKP35659 375 aaKnown RBP17.64■□□□□ 0.41
SPEG-214ENST00000462545 DHX57Q6P158 1386 aaKnown RBP17.63■□□□□ 0.41
SPEG-214ENST00000462545 RBM19Q9Y4C8 960 aaKnown RBP17.63■□□□□ 0.41
SPEG-214ENST00000462545 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
SPEG-214ENST00000462545 RTN4Q9NQC3 1192 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms