RNA–Protein interactions for RNA: ENST00000462445.1

SRGN-202, Transcript of serglycin, humanhuman

TSL 2

Gene SRGN, Length 802 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGN-202ENST00000462445 AEBP2Q6ZN18 517 aaPredicted RBP33.19■■■□□ 2.9
SRGN-202ENST00000462445 CHIC1Q5VXU3 224 aa31.26■■■□□ 2.59
SRGN-202ENST00000462445 SENP3Q9H4L4 574 aaPredicted RBP28.35■■■□□ 2.13
SRGN-202ENST00000462445 PHF23Q9BUL5 403 aaPredicted RBP27.96■■■□□ 2.07
SRGN-202ENST00000462445 FOXD1Q16676 465 aa26.46■■□□□ 1.83
SRGN-202ENST00000462445 PLPPR3Q6T4P5 718 aa24.87■■□□□ 1.57
SRGN-202ENST00000462445 MSH5O43196 834 aa24.86■■□□□ 1.57
SRGN-202ENST00000462445 POTEDQ86YR6 584 aa24.72■■□□□ 1.55
SRGN-202ENST00000462445 PIAS4Q8N2W9 510 aaPredicted RBP24.72■■□□□ 1.55
SRGN-202ENST00000462445 PPP6R1Q9UPN7 881 aa24.55■■□□□ 1.52
SRGN-202ENST00000462445 ADRA2BP18089 450 aa24.49■■□□□ 1.51
SRGN-202ENST00000462445 MAPK8IP2Q13387 824 aaPredicted RBP22.57■■□□□ 1.2
SRGN-202ENST00000462445 DMRT2Q9Y5R5 561 aa22.43■■□□□ 1.18
SRGN-202ENST00000462445 SCAF1Q9H7N4 1312 aaKnown RBP22.37■■□□□ 1.17
SRGN-202ENST00000462445 PPP4R3CPQ6ZMV5 832 aa21.79■■□□□ 1.08
SRGN-202ENST00000462445 DCAF8L1A6NGE4 600 aa21.67■■□□□ 1.06
SRGN-202ENST00000462445 CACNB1Q02641 598 aaPredicted RBP21.55■■□□□ 1.04
SRGN-202ENST00000462445 HOXD11P31277 338 aaPredicted RBP21.48■■□□□ 1.03
SRGN-202ENST00000462445 CNKSR2Q8WXI2 1034 aa21.42■■□□□ 1.02
SRGN-202ENST00000462445 RNF216Q9NWF9 866 aaPredicted RBP21.26■□□□□ 0.99
SRGN-202ENST00000462445 RNF39Q9H2S5 420 aa21.17■□□□□ 0.98
SRGN-202ENST00000462445 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
SRGN-202ENST00000462445 NCBP3Q53F19 620 aaKnown RBP20.87■□□□□ 0.93
SRGN-202ENST00000462445 C1QBPQ07021 282 aaKnown RBP20.85■□□□□ 0.93
SRGN-202ENST00000462445 DNAJC5BQ9UF47 199 aa20.71■□□□□ 0.91
SRGN-202ENST00000462445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.57■□□□□ 0.88
SRGN-202ENST00000462445 NPM3O75607 178 aaKnown RBP20.56■□□□□ 0.88
SRGN-202ENST00000462445 U3KPZ7 1027 aaPredicted RBP20.06■□□□□ 0.8
SRGN-202ENST00000462445 KCNA4P22459 653 aa19.97■□□□□ 0.79
SRGN-202ENST00000462445 CAPN15O75808 1086 aa19.89■□□□□ 0.77
SRGN-202ENST00000462445 SPINK5Q9NQ38 1064 aaPredicted RBP19.88■□□□□ 0.77
SRGN-202ENST00000462445 DSG3P32926 999 aa19.76■□□□□ 0.75
SRGN-202ENST00000462445 SLC4A2P04920 1241 aa19.69■□□□□ 0.74
SRGN-202ENST00000462445 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
SRGN-202ENST00000462445 APLP2Q06481 763 aa19.47■□□□□ 0.71
SRGN-202ENST00000462445 ABCC9O60706 1549 aa19.42■□□□□ 0.7
SRGN-202ENST00000462445 ABCB7O75027 752 aa19.42■□□□□ 0.7
SRGN-202ENST00000462445 ZNF219Q9P2Y4 722 aaPredicted RBP19.41■□□□□ 0.7
SRGN-202ENST00000462445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.38■□□□□ 0.69
SRGN-202ENST00000462445 HNRNPUL2Q1KMD3 747 aaKnown RBP19.38■□□□□ 0.69
SRGN-202ENST00000462445 POTEHQ6S545 545 aa19.34■□□□□ 0.69
SRGN-202ENST00000462445 SAMD1Q6SPF0 538 aaPredicted RBP19.27■□□□□ 0.68
SRGN-202ENST00000462445 CCDC180Q9P1Z9 1646 aa19.1■□□□□ 0.65
SRGN-202ENST00000462445 MYCNP04198 464 aaPredicted RBP19.03■□□□□ 0.64
SRGN-202ENST00000462445 POLA2Q14181 598 aa18.89■□□□□ 0.61
SRGN-202ENST00000462445 RBM42Q9BTD8 480 aaKnown RBP18.87■□□□□ 0.61
SRGN-202ENST00000462445 SLC4A1APQ9BWU0 796 aaKnown RBP18.81■□□□□ 0.6
SRGN-202ENST00000462445 FOXD4L1Q9NU39 408 aa18.7■□□□□ 0.58
SRGN-202ENST00000462445 ATF5Q9Y2D1 282 aaPredicted RBP18.62■□□□□ 0.57
SRGN-202ENST00000462445 CHRDL2Q6WN34 429 aa18.58■□□□□ 0.56
SRGN-202ENST00000462445 ZBTB12Q9Y330 459 aaPredicted RBP18.46■□□□□ 0.55
SRGN-202ENST00000462445 AKT1S1Q96B36 256 aa18.37■□□□□ 0.53
SRGN-202ENST00000462445 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
SRGN-202ENST00000462445 ZBTB22O15209 634 aa18.33■□□□□ 0.52
SRGN-202ENST00000462445 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
SRGN-202ENST00000462445 REM2Q8IYK8 340 aaPredicted RBP18.21■□□□□ 0.51
SRGN-202ENST00000462445 ATXN8OSP0DMR3 200 aa18.09■□□□□ 0.49
SRGN-202ENST00000462445 NACADO15069 1562 aa18.08■□□□□ 0.49
SRGN-202ENST00000462445 UNC13AQ9UPW8 1703 aa18.08■□□□□ 0.48
SRGN-202ENST00000462445 PIP4P2Q8N4L2 257 aa18.07■□□□□ 0.48
SRGN-202ENST00000462445 PITPNM1O00562 1244 aa18.04■□□□□ 0.48
SRGN-202ENST00000462445 SP7Q8TDD2 431 aaPredicted RBP18■□□□□ 0.47
SRGN-202ENST00000462445 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
SRGN-202ENST00000462445 FBLN2P98095 1184 aa17.93■□□□□ 0.46
SRGN-202ENST00000462445 FXR2P51116 673 aaKnown RBP eCLIP17.88■□□□□ 0.45
SRGN-202ENST00000462445 SPDYE2BA6NHP3 402 aa17.86■□□□□ 0.45
SRGN-202ENST00000462445 HAX1O00165 279 aa17.86■□□□□ 0.45
SRGN-202ENST00000462445 SPDYE6P0CI01 402 aa17.86■□□□□ 0.45
SRGN-202ENST00000462445 SPDYE2Q495Y8 402 aa17.86■□□□□ 0.45
SRGN-202ENST00000462445 BICRAQ9NZM4 1560 aa17.85■□□□□ 0.45
SRGN-202ENST00000462445 MKRN4PQ13434 485 aaPredicted RBP17.73■□□□□ 0.43
SRGN-202ENST00000462445 DCAF8L2P0C7V8 631 aa17.72■□□□□ 0.43
SRGN-202ENST00000462445 CLEC11AQ9Y240 323 aa17.7■□□□□ 0.42
SRGN-202ENST00000462445 MYO15BQ96JP2 1530 aa17.68■□□□□ 0.42
SRGN-202ENST00000462445 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
SRGN-202ENST00000462445 SPDYE1Q8NFV5 336 aaPredicted RBP17.63■□□□□ 0.41
SRGN-202ENST00000462445 PRKAR2AP13861 404 aaKnown RBP17.59■□□□□ 0.41
SRGN-202ENST00000462445 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.41
SRGN-202ENST00000462445 EVX2Q03828 476 aa17.58■□□□□ 0.4
SRGN-202ENST00000462445 SSUH2Q9Y2M2 353 aa17.58■□□□□ 0.4
SRGN-202ENST00000462445 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
SRGN-202ENST00000462445 SHROOM4Q9ULL8 1493 aa17.54■□□□□ 0.4
SRGN-202ENST00000462445 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
SRGN-202ENST00000462445 DNAJC5Q9H3Z4 198 aa17.42■□□□□ 0.38
SRGN-202ENST00000462445 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
SRGN-202ENST00000462445 C19orf67A6NJJ6 358 aa17.33■□□□□ 0.36
SRGN-202ENST00000462445 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
SRGN-202ENST00000462445 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
SRGN-202ENST00000462445 DCAF1Q9Y4B6 1507 aa17.29■□□□□ 0.36
SRGN-202ENST00000462445 ZCCHC6Q5VYS8 1495 aaKnown RBP17.27■□□□□ 0.36
SRGN-202ENST00000462445 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
SRGN-202ENST00000462445 GABBR2O75899 941 aa17.17■□□□□ 0.34
SRGN-202ENST00000462445 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
SRGN-202ENST00000462445 CD44P16070 742 aaKnown RBP17.02■□□□□ 0.32
SRGN-202ENST00000462445 EHMT2Q96KQ7 1210 aa16.99■□□□□ 0.31
SRGN-202ENST00000462445 CUX2O14529 1486 aa16.97■□□□□ 0.31
SRGN-202ENST00000462445 LHX8Q68G74 356 aa16.89■□□□□ 0.29
SRGN-202ENST00000462445 STAG3Q9UJ98 1225 aa16.81■□□□□ 0.28
SRGN-202ENST00000462445 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
SRGN-202ENST00000462445 SPDYE4A6NLX3 237 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms