RNA–Protein interactions for RNA: ENST00000462410.5

TRAF5-204, Transcript of TNF receptor associated factor 5, humanhuman

TSL 2

Gene TRAF5, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5-204ENST00000462410 NISCHQ9Y2I1 1504 aa18.18■□□□□ 0.5
TRAF5-204ENST00000462410 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
TRAF5-204ENST00000462410 SUPT5HO00267 1087 aaKnown RBP16.29■□□□□ 0.2
TRAF5-204ENST00000462410 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
TRAF5-204ENST00000462410 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
TRAF5-204ENST00000462410 APLP2Q06481 763 aa15.79■□□□□ 0.12
TRAF5-204ENST00000462410 ABCC9O60706 1549 aa15.65■□□□□ 0.1
TRAF5-204ENST00000462410 CCDC180Q9P1Z9 1646 aa15.49■□□□□ 0.07
TRAF5-204ENST00000462410 TRIM41Q8WV44 630 aa15.45■□□□□ 0.06
TRAF5-204ENST00000462410 UBTFP17480 764 aaKnown RBP15.2■□□□□ 0.02
TRAF5-204ENST00000462410 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
TRAF5-204ENST00000462410 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRAF5-204ENST00000462410 RB1CC1Q8TDY2 1594 aa15.13■□□□□ 0.01
TRAF5-204ENST00000462410 ATP1B4Q9UN42 357 aaPredicted RBP15.09■□□□□ 0.01
TRAF5-204ENST00000462410 ZCCHC6Q5VYS8 1495 aaKnown RBP15.05■□□□□ -0
TRAF5-204ENST00000462410 NACADO15069 1562 aa15.02■□□□□ -0
TRAF5-204ENST00000462410 RANGAP1P46060 587 aaPredicted RBP14.93□□□□□ -0.02
TRAF5-204ENST00000462410 SCRIBQ14160 1630 aa14.91□□□□□ -0.02
TRAF5-204ENST00000462410 ZEB1P37275 1124 aaPredicted RBP14.87□□□□□ -0.03
TRAF5-204ENST00000462410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.86□□□□□ -0.03
TRAF5-204ENST00000462410 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
TRAF5-204ENST00000462410 PELP1Q8IZL8 1130 aaKnown RBP14.83□□□□□ -0.03
TRAF5-204ENST00000462410 MYT1LQ9UL68 1186 aa14.79□□□□□ -0.04
TRAF5-204ENST00000462410 DCAF1Q9Y4B6 1507 aa14.77□□□□□ -0.04
TRAF5-204ENST00000462410 TTBK1Q5TCY1 1321 aaPredicted RBP14.65□□□□□ -0.06
TRAF5-204ENST00000462410 CHIC1Q5VXU3 224 aa14.62□□□□□ -0.07
TRAF5-204ENST00000462410 CCER1Q8TC90 406 aaPredicted RBP14.61□□□□□ -0.07
TRAF5-204ENST00000462410 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.08
TRAF5-204ENST00000462410 FBLN2P98095 1184 aa14.57□□□□□ -0.08
TRAF5-204ENST00000462410 PCGF6Q9BYE7 350 aa14.56□□□□□ -0.08
TRAF5-204ENST00000462410 CDK11AQ9UQ88 783 aaPredicted RBP14.55□□□□□ -0.08
TRAF5-204ENST00000462410 NPM1P06748 294 aaKnown RBP eCLIP14.5□□□□□ -0.09
TRAF5-204ENST00000462410 BAZ1BQ9UIG0 1483 aaKnown RBP14.46□□□□□ -0.09
TRAF5-204ENST00000462410 TRIM26Q12899 539 aaPredicted RBP14.45□□□□□ -0.1
TRAF5-204ENST00000462410 BAZ1AQ9NRL2 1556 aaPredicted RBP14.44□□□□□ -0.1
TRAF5-204ENST00000462410 CSRNP3Q8WYN3 585 aa14.43□□□□□ -0.1
TRAF5-204ENST00000462410 EEA1Q15075 1411 aa14.32□□□□□ -0.12
TRAF5-204ENST00000462410 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
TRAF5-204ENST00000462410 ITGAEP38570 1179 aa14.31□□□□□ -0.12
TRAF5-204ENST00000462410 SMARCA2P51531 1590 aa14.3□□□□□ -0.12
TRAF5-204ENST00000462410 CHMP7Q8WUX9 453 aaPredicted RBP14.3□□□□□ -0.12
TRAF5-204ENST00000462410 CENPBP07199 599 aaPredicted RBP14.29□□□□□ -0.12
TRAF5-204ENST00000462410 FAM50AQ14320 339 aaKnown RBP14.27□□□□□ -0.12
TRAF5-204ENST00000462410 ESF1Q9H501 851 aaKnown RBP14.27□□□□□ -0.12
TRAF5-204ENST00000462410 ACIN1Q9UKV3 1341 aaKnown RBP14.26□□□□□ -0.13
TRAF5-204ENST00000462410 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
TRAF5-204ENST00000462410 PDS5BQ9NTI5 1447 aa14.21□□□□□ -0.13
TRAF5-204ENST00000462410 TRIM52Q96A61 297 aa14.2□□□□□ -0.14
TRAF5-204ENST00000462410 LOC105371045A0A1W2PR82 267 aa14.17□□□□□ -0.14
TRAF5-204ENST00000462410 NEFLP07196 543 aa14.15□□□□□ -0.14
TRAF5-204ENST00000462410 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
TRAF5-204ENST00000462410 WRNQ14191 1432 aaPredicted RBP eCLIP14.13□□□□□ -0.15
TRAF5-204ENST00000462410 PPARGC1BQ86YN6 1023 aaKnown RBP14.1□□□□□ -0.15
TRAF5-204ENST00000462410 P3H3Q8IVL6 736 aa14.05□□□□□ -0.16
TRAF5-204ENST00000462410 POLR3GLQ9BT43 218 aa14.01□□□□□ -0.17
TRAF5-204ENST00000462410 TSPY4P0CV99 314 aa14.01□□□□□ -0.17
TRAF5-204ENST00000462410 TSPY10P0CW01 314 aa14.01□□□□□ -0.17
TRAF5-204ENST00000462410 ZNF777Q9ULD5 760 aaPredicted RBP14.01□□□□□ -0.17
TRAF5-204ENST00000462410 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
TRAF5-204ENST00000462410 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
TRAF5-204ENST00000462410 PLEKHD1A6NEE1 506 aa14□□□□□ -0.17
TRAF5-204ENST00000462410 GOLGA3Q08378 1498 aa13.99□□□□□ -0.17
TRAF5-204ENST00000462410 MTUS2Q5JR59 1369 aa13.98□□□□□ -0.17
TRAF5-204ENST00000462410 BCANQ96GW7 911 aa13.98□□□□□ -0.17
TRAF5-204ENST00000462410 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
TRAF5-204ENST00000462410 CEP164Q9UPV0 1460 aa13.97□□□□□ -0.17
TRAF5-204ENST00000462410 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
TRAF5-204ENST00000462410 CADPSQ9ULU8 1353 aa13.93□□□□□ -0.18
TRAF5-204ENST00000462410 TOP2AP11388 1531 aaKnown RBP13.91□□□□□ -0.18
TRAF5-204ENST00000462410 CLIP1P30622 1438 aa13.91□□□□□ -0.18
TRAF5-204ENST00000462410 CARMIL2Q6F5E8 1435 aa13.9□□□□□ -0.18
TRAF5-204ENST00000462410 NEFMP07197 916 aa13.9□□□□□ -0.18
TRAF5-204ENST00000462410 ARID3CA6NKF2 412 aa13.89□□□□□ -0.19
TRAF5-204ENST00000462410 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
TRAF5-204ENST00000462410 FHAD1B1AJZ9 1412 aa13.86□□□□□ -0.19
TRAF5-204ENST00000462410 MROH2BQ7Z745 1585 aa13.84□□□□□ -0.19
TRAF5-204ENST00000462410 CUX2O14529 1486 aa13.83□□□□□ -0.2
TRAF5-204ENST00000462410 CARMIL1Q5VZK9 1371 aa13.82□□□□□ -0.2
TRAF5-204ENST00000462410 SMARCA4P51532 1647 aa13.81□□□□□ -0.2
TRAF5-204ENST00000462410 SOGA1O94964 1423 aa13.81□□□□□ -0.2
TRAF5-204ENST00000462410 ERICH6Q7L0X2 663 aa13.8□□□□□ -0.2
TRAF5-204ENST00000462410 TNIKQ9UKE5 1360 aa13.8□□□□□ -0.2
TRAF5-204ENST00000462410 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
TRAF5-204ENST00000462410 NEUROD1Q13562 356 aa13.79□□□□□ -0.2
TRAF5-204ENST00000462410 ZNF326Q5BKZ1 582 aaKnown RBP13.78□□□□□ -0.2
TRAF5-204ENST00000462410 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
TRAF5-204ENST00000462410 CHGAP10645 457 aaKnown RBP13.74□□□□□ -0.21
TRAF5-204ENST00000462410 TONSLQ96HA7 1378 aa13.74□□□□□ -0.21
TRAF5-204ENST00000462410 HRCP23327 699 aa13.73□□□□□ -0.21
TRAF5-204ENST00000462410 KCNH8Q96L42 1107 aa13.72□□□□□ -0.21
TRAF5-204ENST00000462410 CFDP1Q9UEE9 299 aaPredicted RBP13.72□□□□□ -0.21
TRAF5-204ENST00000462410 ANP32CO43423 234 aa13.7□□□□□ -0.22
TRAF5-204ENST00000462410 HDGFP51858 240 aaKnown RBP13.68□□□□□ -0.22
TRAF5-204ENST00000462410 FANCD2Q9BXW9 1451 aa13.68□□□□□ -0.22
TRAF5-204ENST00000462410 CEP162Q5TB80 1403 aa13.67□□□□□ -0.22
TRAF5-204ENST00000462410 ARID4BQ4LE39 1312 aaPredicted RBP13.67□□□□□ -0.22
TRAF5-204ENST00000462410 EIF4G1Q04637 1599 aaKnown RBP13.67□□□□□ -0.22
TRAF5-204ENST00000462410 FMN1Q68DA7 1419 aa13.66□□□□□ -0.22
TRAF5-204ENST00000462410 SLC24A1O60721 1099 aa13.66□□□□□ -0.22
TRAF5-204ENST00000462410 CCNB3Q8WWL7 1395 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms