RNA–Protein interactions for RNA: ENST00000460842.5

TSC22D1-204, Transcript of TSC22 domain family member 1, humanhuman

TSL 3

Gene TSC22D1, Length 903 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-204ENST00000460842 AEBP2Q6ZN18 517 aaPredicted RBP30.7■■■□□ 2.51
TSC22D1-204ENST00000460842 CHIC1Q5VXU3 224 aa29.5■■■□□ 2.31
TSC22D1-204ENST00000460842 SENP3Q9H4L4 574 aaPredicted RBP26.1■■□□□ 1.77
TSC22D1-204ENST00000460842 PHF23Q9BUL5 403 aaPredicted RBP25.92■■□□□ 1.74
TSC22D1-204ENST00000460842 FOXD1Q16676 465 aa24.32■■□□□ 1.48
TSC22D1-204ENST00000460842 PLPPR3Q6T4P5 718 aa23.74■■□□□ 1.39
TSC22D1-204ENST00000460842 PPP6R1Q9UPN7 881 aa23.05■■□□□ 1.28
TSC22D1-204ENST00000460842 ADRA2BP18089 450 aa22.99■■□□□ 1.27
TSC22D1-204ENST00000460842 PIAS4Q8N2W9 510 aaPredicted RBP22.79■■□□□ 1.24
TSC22D1-204ENST00000460842 MSH5O43196 834 aa22.58■■□□□ 1.21
TSC22D1-204ENST00000460842 POTEDQ86YR6 584 aa21.43■■□□□ 1.02
TSC22D1-204ENST00000460842 MAPK8IP2Q13387 824 aaPredicted RBP21.02■□□□□ 0.96
TSC22D1-204ENST00000460842 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.95
TSC22D1-204ENST00000460842 PPP4R3CPQ6ZMV5 832 aa20.88■□□□□ 0.93
TSC22D1-204ENST00000460842 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
TSC22D1-204ENST00000460842 CNKSR2Q8WXI2 1034 aa20.39■□□□□ 0.85
TSC22D1-204ENST00000460842 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
TSC22D1-204ENST00000460842 HOXD11P31277 338 aaPredicted RBP20.16■□□□□ 0.82
TSC22D1-204ENST00000460842 RNF216Q9NWF9 866 aaPredicted RBP20.1■□□□□ 0.81
TSC22D1-204ENST00000460842 DCAF8L1A6NGE4 600 aa19.91■□□□□ 0.78
TSC22D1-204ENST00000460842 NPM3O75607 178 aaKnown RBP19.88■□□□□ 0.77
TSC22D1-204ENST00000460842 KCNA4P22459 653 aa19.84■□□□□ 0.77
TSC22D1-204ENST00000460842 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
TSC22D1-204ENST00000460842 RNF39Q9H2S5 420 aa19.31■□□□□ 0.68
TSC22D1-204ENST00000460842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.21■□□□□ 0.67
TSC22D1-204ENST00000460842 CACNB1Q02641 598 aaPredicted RBP19.17■□□□□ 0.66
TSC22D1-204ENST00000460842 C1QBPQ07021 282 aaKnown RBP19.05■□□□□ 0.64
TSC22D1-204ENST00000460842 SLC4A2P04920 1241 aa18.91■□□□□ 0.62
TSC22D1-204ENST00000460842 U3KPZ7 1027 aaPredicted RBP18.84■□□□□ 0.61
TSC22D1-204ENST00000460842 SLC4A1APQ9BWU0 796 aaKnown RBP18.8■□□□□ 0.6
TSC22D1-204ENST00000460842 NISCHQ9Y2I1 1504 aa18.65■□□□□ 0.58
TSC22D1-204ENST00000460842 SPINK5Q9NQ38 1064 aaPredicted RBP18.47■□□□□ 0.55
TSC22D1-204ENST00000460842 CAPN15O75808 1086 aa18.42■□□□□ 0.54
TSC22D1-204ENST00000460842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
TSC22D1-204ENST00000460842 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
TSC22D1-204ENST00000460842 MYCNP04198 464 aaPredicted RBP18.37■□□□□ 0.53
TSC22D1-204ENST00000460842 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
TSC22D1-204ENST00000460842 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
TSC22D1-204ENST00000460842 APLP2Q06481 763 aa18.33■□□□□ 0.52
TSC22D1-204ENST00000460842 ZBTB22O15209 634 aa18.25■□□□□ 0.51
TSC22D1-204ENST00000460842 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
TSC22D1-204ENST00000460842 DSG3P32926 999 aa18.22■□□□□ 0.51
TSC22D1-204ENST00000460842 ZNF219Q9P2Y4 722 aaPredicted RBP18.16■□□□□ 0.5
TSC22D1-204ENST00000460842 ABCB7O75027 752 aa18.03■□□□□ 0.48
TSC22D1-204ENST00000460842 ATF5Q9Y2D1 282 aaPredicted RBP17.95■□□□□ 0.46
TSC22D1-204ENST00000460842 POLA2Q14181 598 aa17.83■□□□□ 0.44
TSC22D1-204ENST00000460842 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
TSC22D1-204ENST00000460842 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
TSC22D1-204ENST00000460842 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
TSC22D1-204ENST00000460842 ABCC9O60706 1549 aa17.6■□□□□ 0.41
TSC22D1-204ENST00000460842 ZBTB12Q9Y330 459 aaPredicted RBP17.44■□□□□ 0.38
TSC22D1-204ENST00000460842 RBM42Q9BTD8 480 aaKnown RBP17.35■□□□□ 0.37
TSC22D1-204ENST00000460842 OSCARQ8IYS5 282 aa17.21■□□□□ 0.35
TSC22D1-204ENST00000460842 FBLN2P98095 1184 aa17.2■□□□□ 0.34
TSC22D1-204ENST00000460842 MKRN4PQ13434 485 aaPredicted RBP17.14■□□□□ 0.33
TSC22D1-204ENST00000460842 AKT1S1Q96B36 256 aa17.05■□□□□ 0.32
TSC22D1-204ENST00000460842 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
TSC22D1-204ENST00000460842 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
TSC22D1-204ENST00000460842 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
TSC22D1-204ENST00000460842 REM2Q8IYK8 340 aaPredicted RBP16.9■□□□□ 0.3
TSC22D1-204ENST00000460842 POTEHQ6S545 545 aa16.86■□□□□ 0.29
TSC22D1-204ENST00000460842 CHRDL2Q6WN34 429 aa16.84■□□□□ 0.29
TSC22D1-204ENST00000460842 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
TSC22D1-204ENST00000460842 CCDC180Q9P1Z9 1646 aa16.79■□□□□ 0.28
TSC22D1-204ENST00000460842 SSUH2Q9Y2M2 353 aa16.76■□□□□ 0.27
TSC22D1-204ENST00000460842 PITPNM1O00562 1244 aa16.71■□□□□ 0.27
TSC22D1-204ENST00000460842 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
TSC22D1-204ENST00000460842 SPDYE1Q8NFV5 336 aaPredicted RBP16.57■□□□□ 0.24
TSC22D1-204ENST00000460842 CLEC11AQ9Y240 323 aa16.54■□□□□ 0.24
TSC22D1-204ENST00000460842 PIP4P2Q8N4L2 257 aa16.53■□□□□ 0.24
TSC22D1-204ENST00000460842 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
TSC22D1-204ENST00000460842 FXR2P51116 673 aaKnown RBP eCLIP16.5■□□□□ 0.23
TSC22D1-204ENST00000460842 RB1CC1Q8TDY2 1594 aa16.38■□□□□ 0.21
TSC22D1-204ENST00000460842 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
TSC22D1-204ENST00000460842 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
TSC22D1-204ENST00000460842 PRKAR2AP13861 404 aaKnown RBP16.29■□□□□ 0.2
TSC22D1-204ENST00000460842 STAG3Q9UJ98 1225 aa16.21■□□□□ 0.19
TSC22D1-204ENST00000460842 CHADLQ6NUI6 762 aa16.19■□□□□ 0.18
TSC22D1-204ENST00000460842 PROM2Q8N271 834 aa16.16■□□□□ 0.18
TSC22D1-204ENST00000460842 HAX1O00165 279 aa16.15■□□□□ 0.18
TSC22D1-204ENST00000460842 NACADO15069 1562 aa16.12■□□□□ 0.17
TSC22D1-204ENST00000460842 FKBP8Q14318 412 aa16.07■□□□□ 0.16
TSC22D1-204ENST00000460842 CREBZFQ9NS37 354 aa16■□□□□ 0.15
TSC22D1-204ENST00000460842 EVX2Q03828 476 aa15.99■□□□□ 0.15
TSC22D1-204ENST00000460842 FARP1Q9Y4F1 1045 aaPredicted RBP15.99■□□□□ 0.15
TSC22D1-204ENST00000460842 SP7Q8TDD2 431 aaPredicted RBP15.98■□□□□ 0.15
TSC22D1-204ENST00000460842 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
TSC22D1-204ENST00000460842 C19orf67A6NJJ6 358 aa15.95■□□□□ 0.14
TSC22D1-204ENST00000460842 CECR2Q9BXF3 1484 aa15.88■□□□□ 0.13
TSC22D1-204ENST00000460842 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
TSC22D1-204ENST00000460842 UNC13AQ9UPW8 1703 aa15.78■□□□□ 0.12
TSC22D1-204ENST00000460842 CD44P16070 742 aaKnown RBP15.78■□□□□ 0.12
TSC22D1-204ENST00000460842 MNX1P50219 401 aaPredicted RBP15.77■□□□□ 0.12
TSC22D1-204ENST00000460842 MIER1Q8N108 512 aa15.74■□□□□ 0.11
TSC22D1-204ENST00000460842 CC2D2AQ9P2K1 1620 aa15.73■□□□□ 0.11
TSC22D1-204ENST00000460842 NPM1P06748 294 aaKnown RBP eCLIP15.71■□□□□ 0.11
TSC22D1-204ENST00000460842 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
TSC22D1-204ENST00000460842 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
TSC22D1-204ENST00000460842 PLCD3Q8N3E9 789 aa15.64■□□□□ 0.09
TSC22D1-204ENST00000460842 GABBR2O75899 941 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms