RNA–Protein interactions for RNA: ENST00000459674.5

LRP8-205, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 3,300 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-205ENST00000459674 NISCHQ9Y2I1 1504 aa13.14□□□□□ -0.31
LRP8-205ENST00000459674 HRCP23327 699 aa11.85□□□□□ -0.51
LRP8-205ENST00000459674 PELP1Q8IZL8 1130 aaKnown RBP11.62□□□□□ -0.55
LRP8-205ENST00000459674 SUPT5HO00267 1087 aaKnown RBP11.6□□□□□ -0.55
LRP8-205ENST00000459674 PCGF6Q9BYE7 350 aa11.55□□□□□ -0.56
LRP8-205ENST00000459674 SHROOM4Q9ULL8 1493 aa11.54□□□□□ -0.56
LRP8-205ENST00000459674 PPARGC1BQ86YN6 1023 aaKnown RBP11.5□□□□□ -0.57
LRP8-205ENST00000459674 CHIC1Q5VXU3 224 aa11.46□□□□□ -0.58
LRP8-205ENST00000459674 MYO15BQ96JP2 1530 aa11.37□□□□□ -0.59
LRP8-205ENST00000459674 DCAF1Q9Y4B6 1507 aa11.32□□□□□ -0.6
LRP8-205ENST00000459674 ZEB1P37275 1124 aaPredicted RBP11.29□□□□□ -0.6
LRP8-205ENST00000459674 TRIM26Q12899 539 aaPredicted RBP11.28□□□□□ -0.6
LRP8-205ENST00000459674 MYT1Q01538 1121 aa11.24□□□□□ -0.61
LRP8-205ENST00000459674 SCAF1Q9H7N4 1312 aaKnown RBP11.2□□□□□ -0.62
LRP8-205ENST00000459674 ZCCHC6Q5VYS8 1495 aaKnown RBP11.17□□□□□ -0.62
LRP8-205ENST00000459674 LOC105371045A0A1W2PR82 267 aa11.13□□□□□ -0.63
LRP8-205ENST00000459674 CCDC180Q9P1Z9 1646 aa11.12□□□□□ -0.63
LRP8-205ENST00000459674 ACIN1Q9UKV3 1341 aaKnown RBP10.95□□□□□ -0.66
LRP8-205ENST00000459674 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
LRP8-205ENST00000459674 DNAJC5Q9H3Z4 198 aa10.92□□□□□ -0.66
LRP8-205ENST00000459674 CENPBP07199 599 aaPredicted RBP10.9□□□□□ -0.66
LRP8-205ENST00000459674 NEUROD1Q13562 356 aa10.85□□□□□ -0.67
LRP8-205ENST00000459674 GTF3C3Q9Y5Q9 886 aa10.83□□□□□ -0.68
LRP8-205ENST00000459674 TRIM41Q8WV44 630 aa10.81□□□□□ -0.68
LRP8-205ENST00000459674 DIEXFQ68CQ4 756 aaKnown RBP10.76□□□□□ -0.69
LRP8-205ENST00000459674 CCER1Q8TC90 406 aaPredicted RBP10.75□□□□□ -0.69
LRP8-205ENST00000459674 FAM9AQ8IZU1 332 aaPredicted RBP10.69□□□□□ -0.7
LRP8-205ENST00000459674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.68□□□□□ -0.7
LRP8-205ENST00000459674 RSF1Q96T23 1441 aaPredicted RBP10.59□□□□□ -0.71
LRP8-205ENST00000459674 ABCC9O60706 1549 aa10.58□□□□□ -0.72
LRP8-205ENST00000459674 ZNF316A6NFI3 1004 aaPredicted RBP10.58□□□□□ -0.72
LRP8-205ENST00000459674 EHMT2Q96KQ7 1210 aa10.56□□□□□ -0.72
LRP8-205ENST00000459674 TTBK1Q5TCY1 1321 aaPredicted RBP10.54□□□□□ -0.72
LRP8-205ENST00000459674 RB1CC1Q8TDY2 1594 aa10.51□□□□□ -0.73
LRP8-205ENST00000459674 YTHDC1Q96MU7 727 aaKnown RBP10.5□□□□□ -0.73
LRP8-205ENST00000459674 CLSPNQ9HAW4 1339 aa10.48□□□□□ -0.73
LRP8-205ENST00000459674 WRNQ14191 1432 aaPredicted RBP eCLIP10.43□□□□□ -0.74
LRP8-205ENST00000459674 MIER1Q8N108 512 aa10.43□□□□□ -0.74
LRP8-205ENST00000459674 BCL11AQ9H165 835 aa10.38□□□□□ -0.75
LRP8-205ENST00000459674 ANP32EQ9BTT0 268 aa10.35□□□□□ -0.75
LRP8-205ENST00000459674 CEP162Q5TB80 1403 aa10.31□□□□□ -0.76
LRP8-205ENST00000459674 TNIKQ9UKE5 1360 aa10.31□□□□□ -0.76
LRP8-205ENST00000459674 SUPT16HQ9Y5B9 1047 aaKnown RBP10.31□□□□□ -0.76
LRP8-205ENST00000459674 SCRIBQ14160 1630 aa10.3□□□□□ -0.76
LRP8-205ENST00000459674 TSHZ2Q9NRE2 1034 aa10.26□□□□□ -0.77
LRP8-205ENST00000459674 UBTFP17480 764 aaKnown RBP10.24□□□□□ -0.77
LRP8-205ENST00000459674 EEA1Q15075 1411 aa10.23□□□□□ -0.77
LRP8-205ENST00000459674 HNRNPUL2Q1KMD3 747 aaKnown RBP10.23□□□□□ -0.77
LRP8-205ENST00000459674 CSRNP3Q8WYN3 585 aa10.22□□□□□ -0.77
LRP8-205ENST00000459674 MROH2BQ7Z745 1585 aa10.21□□□□□ -0.78
LRP8-205ENST00000459674 CECR2Q9BXF3 1484 aa10.21□□□□□ -0.78
LRP8-205ENST00000459674 APLP2Q06481 763 aa10.18□□□□□ -0.78
LRP8-205ENST00000459674 CCDC88BA6NC98 1476 aa10.16□□□□□ -0.78
LRP8-205ENST00000459674 GOLGA3Q08378 1498 aa10.14□□□□□ -0.79
LRP8-205ENST00000459674 SOGA1O94964 1423 aa10.14□□□□□ -0.79
LRP8-205ENST00000459674 WIZO95785 1651 aa10.13□□□□□ -0.79
LRP8-205ENST00000459674 EIF4G1Q04637 1599 aaKnown RBP10.13□□□□□ -0.79
LRP8-205ENST00000459674 BAZ1AQ9NRL2 1556 aaPredicted RBP10.12□□□□□ -0.79
LRP8-205ENST00000459674 ABCC8Q09428 1581 aa10.08□□□□□ -0.8
LRP8-205ENST00000459674 NEFLP07196 543 aa10.06□□□□□ -0.8
LRP8-205ENST00000459674 NACADO15069 1562 aa10.06□□□□□ -0.8
LRP8-205ENST00000459674 CLIP1P30622 1438 aa10.05□□□□□ -0.8
LRP8-205ENST00000459674 VPS8Q8N3P4 1428 aa10.05□□□□□ -0.8
LRP8-205ENST00000459674 FKBP8Q14318 412 aa10.05□□□□□ -0.8
LRP8-205ENST00000459674 RBM19Q9Y4C8 960 aaKnown RBP10.05□□□□□ -0.8
LRP8-205ENST00000459674 DHX57Q6P158 1386 aaKnown RBP10.04□□□□□ -0.8
LRP8-205ENST00000459674 CEP164Q9UPV0 1460 aa10.04□□□□□ -0.8
LRP8-205ENST00000459674 PRKCSHP14314 528 aaPredicted RBP10.04□□□□□ -0.8
LRP8-205ENST00000459674 TOP2AP11388 1531 aaKnown RBP10.03□□□□□ -0.8
LRP8-205ENST00000459674 RUSC2Q8N2Y8 1516 aa10.02□□□□□ -0.81
LRP8-205ENST00000459674 BCANQ96GW7 911 aa10.02□□□□□ -0.81
LRP8-205ENST00000459674 MYT1LQ9UL68 1186 aa9.99□□□□□ -0.81
LRP8-205ENST00000459674 BAZ1BQ9UIG0 1483 aaKnown RBP9.96□□□□□ -0.81
LRP8-205ENST00000459674 SMARCA2P51531 1590 aa9.96□□□□□ -0.82
LRP8-205ENST00000459674 KIF21BO75037 1637 aa9.95□□□□□ -0.82
LRP8-205ENST00000459674 ERICH6Q7L0X2 663 aa9.95□□□□□ -0.82
LRP8-205ENST00000459674 KCNH8Q96L42 1107 aa9.94□□□□□ -0.82
LRP8-205ENST00000459674 FANCIQ9NVI1 1328 aa9.93□□□□□ -0.82
LRP8-205ENST00000459674 MSH5O43196 834 aa9.92□□□□□ -0.82
LRP8-205ENST00000459674 CCER2I3L3R5 266 aa9.92□□□□□ -0.82
LRP8-205ENST00000459674 CDK11AQ9UQ88 783 aaPredicted RBP9.9□□□□□ -0.82
LRP8-205ENST00000459674 DDX10Q13206 875 aaKnown RBP9.9□□□□□ -0.83
LRP8-205ENST00000459674 ANP32CO43423 234 aa9.89□□□□□ -0.83
LRP8-205ENST00000459674 CUX2O14529 1486 aa9.88□□□□□ -0.83
LRP8-205ENST00000459674 RANGAP1P46060 587 aaPredicted RBP9.88□□□□□ -0.83
LRP8-205ENST00000459674 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
LRP8-205ENST00000459674 RRBP1Q9P2E9 1410 aaKnown RBP9.88□□□□□ -0.83
LRP8-205ENST00000459674 ITGAEP38570 1179 aa9.87□□□□□ -0.83
LRP8-205ENST00000459674 SMARCA4P51532 1647 aa9.87□□□□□ -0.83
LRP8-205ENST00000459674 RAPGEF2Q9Y4G8 1499 aa9.86□□□□□ -0.83
LRP8-205ENST00000459674 PPP1R15AO75807 674 aaPredicted RBP9.85□□□□□ -0.83
LRP8-205ENST00000459674 CCNB3Q8WWL7 1395 aa9.85□□□□□ -0.83
LRP8-205ENST00000459674 ERICH6BQ5W0A0 696 aa9.85□□□□□ -0.83
LRP8-205ENST00000459674 TRIM52Q96A61 297 aa9.85□□□□□ -0.83
LRP8-205ENST00000459674 KANK4Q5T7N3 995 aaPredicted RBP9.84□□□□□ -0.83
LRP8-205ENST00000459674 RAB3GAP2Q9H2M9 1393 aa9.8□□□□□ -0.84
LRP8-205ENST00000459674 DEKP35659 375 aaKnown RBP9.78□□□□□ -0.84
LRP8-205ENST00000459674 SYNJ1O43426 1573 aa9.78□□□□□ -0.84
LRP8-205ENST00000459674 DNAJC5BQ9UF47 199 aa9.77□□□□□ -0.84
LRP8-205ENST00000459674 SETD5Q9C0A6 1442 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms