RNA–Protein interactions for RNA: ENST00000459673.1

CDHR1-203, Transcript of cadherin related family member 1, humanhuman

TSL 2

Gene CDHR1, Length 3,757 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-203ENST00000459673 NISCHQ9Y2I1 1504 aa16.06■□□□□ 0.16
CDHR1-203ENST00000459673 DCAF8L2P0C7V8 631 aa14.73□□□□□ -0.05
CDHR1-203ENST00000459673 SHROOM4Q9ULL8 1493 aa14.65□□□□□ -0.06
CDHR1-203ENST00000459673 SUPT5HO00267 1087 aaKnown RBP14.52□□□□□ -0.09
CDHR1-203ENST00000459673 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
CDHR1-203ENST00000459673 MYO15BQ96JP2 1530 aa13.66□□□□□ -0.22
CDHR1-203ENST00000459673 CHIC1Q5VXU3 224 aa13.65□□□□□ -0.23
CDHR1-203ENST00000459673 PCGF6Q9BYE7 350 aa13.63□□□□□ -0.23
CDHR1-203ENST00000459673 HRCP23327 699 aa13.63□□□□□ -0.23
CDHR1-203ENST00000459673 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
CDHR1-203ENST00000459673 FAM9AQ8IZU1 332 aaPredicted RBP13.59□□□□□ -0.23
CDHR1-203ENST00000459673 PPARGC1BQ86YN6 1023 aaKnown RBP13.5□□□□□ -0.25
CDHR1-203ENST00000459673 LOC105371045A0A1W2PR82 267 aa13.48□□□□□ -0.25
CDHR1-203ENST00000459673 CCDC180Q9P1Z9 1646 aa13.37□□□□□ -0.27
CDHR1-203ENST00000459673 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
CDHR1-203ENST00000459673 TTBK1Q5TCY1 1321 aaPredicted RBP13.31□□□□□ -0.28
CDHR1-203ENST00000459673 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
CDHR1-203ENST00000459673 ABCC9O60706 1549 aa13.13□□□□□ -0.31
CDHR1-203ENST00000459673 TRIM26Q12899 539 aaPredicted RBP13.12□□□□□ -0.31
CDHR1-203ENST00000459673 RANGAP1P46060 587 aaPredicted RBP13.03□□□□□ -0.32
CDHR1-203ENST00000459673 SCRIBQ14160 1630 aa12.97□□□□□ -0.33
CDHR1-203ENST00000459673 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
CDHR1-203ENST00000459673 PABPN1Q86U42 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
CDHR1-203ENST00000459673 CCER1Q8TC90 406 aaPredicted RBP12.88□□□□□ -0.35
CDHR1-203ENST00000459673 RSF1Q96T23 1441 aaPredicted RBP12.87□□□□□ -0.35
CDHR1-203ENST00000459673 ZEB1P37275 1124 aaPredicted RBP12.85□□□□□ -0.35
CDHR1-203ENST00000459673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
CDHR1-203ENST00000459673 RB1CC1Q8TDY2 1594 aa12.79□□□□□ -0.36
CDHR1-203ENST00000459673 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
CDHR1-203ENST00000459673 APLP2Q06481 763 aa12.72□□□□□ -0.37
CDHR1-203ENST00000459673 CECR2Q9BXF3 1484 aa12.66□□□□□ -0.38
CDHR1-203ENST00000459673 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
CDHR1-203ENST00000459673 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
CDHR1-203ENST00000459673 YTHDC1Q96MU7 727 aaKnown RBP12.6□□□□□ -0.39
CDHR1-203ENST00000459673 MROH2BQ7Z745 1585 aa12.58□□□□□ -0.4
CDHR1-203ENST00000459673 NEUROD1Q13562 356 aa12.55□□□□□ -0.4
CDHR1-203ENST00000459673 ATP1B4Q9UN42 357 aaPredicted RBP12.53□□□□□ -0.4
CDHR1-203ENST00000459673 WIZO95785 1651 aa12.53□□□□□ -0.4
CDHR1-203ENST00000459673 ACIN1Q9UKV3 1341 aaKnown RBP12.52□□□□□ -0.41
CDHR1-203ENST00000459673 ITGAEP38570 1179 aa12.51□□□□□ -0.41
CDHR1-203ENST00000459673 DIEXFQ68CQ4 756 aaKnown RBP12.49□□□□□ -0.41
CDHR1-203ENST00000459673 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
CDHR1-203ENST00000459673 GTF3C3Q9Y5Q9 886 aa12.46□□□□□ -0.41
CDHR1-203ENST00000459673 ABCC8Q09428 1581 aa12.4□□□□□ -0.42
CDHR1-203ENST00000459673 CENPBP07199 599 aaPredicted RBP12.4□□□□□ -0.43
CDHR1-203ENST00000459673 NACADO15069 1562 aa12.39□□□□□ -0.43
CDHR1-203ENST00000459673 CCDC88BA6NC98 1476 aa12.38□□□□□ -0.43
CDHR1-203ENST00000459673 CEP162Q5TB80 1403 aa12.35□□□□□ -0.43
CDHR1-203ENST00000459673 SOGA1O94964 1423 aa12.34□□□□□ -0.43
CDHR1-203ENST00000459673 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
CDHR1-203ENST00000459673 EIF4G1Q04637 1599 aaKnown RBP12.32□□□□□ -0.44
CDHR1-203ENST00000459673 RUSC2Q8N2Y8 1516 aa12.29□□□□□ -0.44
CDHR1-203ENST00000459673 ZNF316A6NFI3 1004 aaPredicted RBP12.28□□□□□ -0.44
CDHR1-203ENST00000459673 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
CDHR1-203ENST00000459673 TNIKQ9UKE5 1360 aa12.25□□□□□ -0.45
CDHR1-203ENST00000459673 P3H3Q8IVL6 736 aa12.24□□□□□ -0.45
CDHR1-203ENST00000459673 MIER1Q8N108 512 aa12.23□□□□□ -0.45
CDHR1-203ENST00000459673 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.45
CDHR1-203ENST00000459673 SMARCA2P51531 1590 aa12.2□□□□□ -0.46
CDHR1-203ENST00000459673 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
CDHR1-203ENST00000459673 SMARCA4P51532 1647 aa12.17□□□□□ -0.46
CDHR1-203ENST00000459673 FAM50AQ14320 339 aaKnown RBP12.17□□□□□ -0.46
CDHR1-203ENST00000459673 CLIP1P30622 1438 aa12.15□□□□□ -0.47
CDHR1-203ENST00000459673 GOLGA3Q08378 1498 aa12.13□□□□□ -0.47
CDHR1-203ENST00000459673 EEA1Q15075 1411 aa12.11□□□□□ -0.47
CDHR1-203ENST00000459673 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.48
CDHR1-203ENST00000459673 ARID3CA6NKF2 412 aa12.07□□□□□ -0.48
CDHR1-203ENST00000459673 CNGB1Q14028 1251 aaPredicted RBP12.04□□□□□ -0.48
CDHR1-203ENST00000459673 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
CDHR1-203ENST00000459673 CEP164Q9UPV0 1460 aa12.02□□□□□ -0.49
CDHR1-203ENST00000459673 SYNJ1O43426 1573 aa12.01□□□□□ -0.49
CDHR1-203ENST00000459673 VPS8Q8N3P4 1428 aa11.99□□□□□ -0.49
CDHR1-203ENST00000459673 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
CDHR1-203ENST00000459673 KANK4Q5T7N3 995 aaPredicted RBP11.99□□□□□ -0.49
CDHR1-203ENST00000459673 HIRIP3Q9BW71 556 aaPredicted RBP11.99□□□□□ -0.49
CDHR1-203ENST00000459673 MYT1Q01538 1121 aa11.97□□□□□ -0.49
CDHR1-203ENST00000459673 BCANQ96GW7 911 aa11.96□□□□□ -0.49
CDHR1-203ENST00000459673 KIF21BO75037 1637 aa11.94□□□□□ -0.5
CDHR1-203ENST00000459673 POLR3GLQ9BT43 218 aa11.92□□□□□ -0.5
CDHR1-203ENST00000459673 ATAD2BQ9ULI0 1458 aa11.91□□□□□ -0.5
CDHR1-203ENST00000459673 DHX57Q6P158 1386 aaKnown RBP11.91□□□□□ -0.5
CDHR1-203ENST00000459673 SUPT16HQ9Y5B9 1047 aaKnown RBP11.89□□□□□ -0.51
CDHR1-203ENST00000459673 DDX10Q13206 875 aaKnown RBP11.89□□□□□ -0.51
CDHR1-203ENST00000459673 TRIM52Q96A61 297 aa11.88□□□□□ -0.51
CDHR1-203ENST00000459673 BICRAQ9NZM4 1560 aa11.87□□□□□ -0.51
CDHR1-203ENST00000459673 KIF27Q86VH2 1401 aa11.86□□□□□ -0.51
CDHR1-203ENST00000459673 KCNH8Q96L42 1107 aa11.86□□□□□ -0.51
CDHR1-203ENST00000459673 SIN3AQ96ST3 1273 aa11.85□□□□□ -0.51
CDHR1-203ENST00000459673 CHIC2Q9UKJ5 165 aa11.84□□□□□ -0.51
CDHR1-203ENST00000459673 NEFLP07196 543 aa11.84□□□□□ -0.51
CDHR1-203ENST00000459673 FBLN2P98095 1184 aa11.82□□□□□ -0.52
CDHR1-203ENST00000459673 CUX2O14529 1486 aa11.81□□□□□ -0.52
CDHR1-203ENST00000459673 PEG3Q9GZU2 1588 aa11.81□□□□□ -0.52
CDHR1-203ENST00000459673 CLSPNQ9HAW4 1339 aa11.81□□□□□ -0.52
CDHR1-203ENST00000459673 ARAP1Q96P48 1450 aa11.8□□□□□ -0.52
CDHR1-203ENST00000459673 ZNF326Q5BKZ1 582 aaKnown RBP11.78□□□□□ -0.52
CDHR1-203ENST00000459673 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
CDHR1-203ENST00000459673 CCNB3Q8WWL7 1395 aa11.76□□□□□ -0.53
CDHR1-203ENST00000459673 TOP2BQ02880 1626 aa11.76□□□□□ -0.53
CDHR1-203ENST00000459673 CARMIL1Q5VZK9 1371 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms