RNA–Protein interactions for RNA: ENST00000441621.6

CHRND-203, Transcript of cholinergic receptor nicotinic delta subunit, humanhuman

TSL 5

Gene CHRND, Length 3,022 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRND-203ENST00000441621 NISCHQ9Y2I1 1504 aa26.13■■□□□ 1.77
CHRND-203ENST00000441621 HRCP23327 699 aa23.52■■□□□ 1.36
CHRND-203ENST00000441621 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
CHRND-203ENST00000441621 SUPT5HO00267 1087 aaKnown RBP23.37■■□□□ 1.33
CHRND-203ENST00000441621 PPARGC1BQ86YN6 1023 aaKnown RBP23.2■■□□□ 1.3
CHRND-203ENST00000441621 PCGF6Q9BYE7 350 aa23.18■■□□□ 1.3
CHRND-203ENST00000441621 MYO15BQ96JP2 1530 aa23■■□□□ 1.27
CHRND-203ENST00000441621 CHIC1Q5VXU3 224 aa22.84■■□□□ 1.25
CHRND-203ENST00000441621 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
CHRND-203ENST00000441621 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
CHRND-203ENST00000441621 CCDC180Q9P1Z9 1646 aa22.41■■□□□ 1.18
CHRND-203ENST00000441621 DCAF1Q9Y4B6 1507 aa22.37■■□□□ 1.17
CHRND-203ENST00000441621 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
CHRND-203ENST00000441621 TRIM26Q12899 539 aaPredicted RBP22.31■■□□□ 1.16
CHRND-203ENST00000441621 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
CHRND-203ENST00000441621 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
CHRND-203ENST00000441621 ZEB1P37275 1124 aaPredicted RBP22.06■■□□□ 1.12
CHRND-203ENST00000441621 ABCC9O60706 1549 aa22.03■■□□□ 1.12
CHRND-203ENST00000441621 ACIN1Q9UKV3 1341 aaKnown RBP21.73■■□□□ 1.07
CHRND-203ENST00000441621 NEUROD1Q13562 356 aa21.72■■□□□ 1.07
CHRND-203ENST00000441621 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
CHRND-203ENST00000441621 FAM9AQ8IZU1 332 aaPredicted RBP21.66■■□□□ 1.06
CHRND-203ENST00000441621 MYT1Q01538 1121 aa21.64■■□□□ 1.05
CHRND-203ENST00000441621 GTF3C3Q9Y5Q9 886 aa21.62■■□□□ 1.05
CHRND-203ENST00000441621 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
CHRND-203ENST00000441621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.5■■□□□ 1.03
CHRND-203ENST00000441621 CENPBP07199 599 aaPredicted RBP21.46■■□□□ 1.03
CHRND-203ENST00000441621 CCER1Q8TC90 406 aaPredicted RBP21.43■■□□□ 1.02
CHRND-203ENST00000441621 DIEXFQ68CQ4 756 aaKnown RBP21.41■■□□□ 1.02
CHRND-203ENST00000441621 YTHDC1Q96MU7 727 aaKnown RBP21.21■□□□□ 0.99
CHRND-203ENST00000441621 TTBK1Q5TCY1 1321 aaPredicted RBP21.16■□□□□ 0.98
CHRND-203ENST00000441621 NACADO15069 1562 aa21.12■□□□□ 0.97
CHRND-203ENST00000441621 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
CHRND-203ENST00000441621 RSF1Q96T23 1441 aaPredicted RBP21.09■□□□□ 0.97
CHRND-203ENST00000441621 ZNF316A6NFI3 1004 aaPredicted RBP20.95■□□□□ 0.94
CHRND-203ENST00000441621 MIER1Q8N108 512 aa20.88■□□□□ 0.93
CHRND-203ENST00000441621 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
CHRND-203ENST00000441621 PABPN1Q86U42 306 aaKnown RBP eCLIP20.77■□□□□ 0.92
CHRND-203ENST00000441621 HNRNPUL2Q1KMD3 747 aaKnown RBP20.58■□□□□ 0.88
CHRND-203ENST00000441621 CEP162Q5TB80 1403 aa20.57■□□□□ 0.88
CHRND-203ENST00000441621 WRNQ14191 1432 aaPredicted RBP eCLIP20.56■□□□□ 0.88
CHRND-203ENST00000441621 CECR2Q9BXF3 1484 aa20.55■□□□□ 0.88
CHRND-203ENST00000441621 SUPT16HQ9Y5B9 1047 aaKnown RBP20.53■□□□□ 0.88
CHRND-203ENST00000441621 UNC13AQ9UPW8 1703 aa20.5■□□□□ 0.87
CHRND-203ENST00000441621 MROH2BQ7Z745 1585 aa20.49■□□□□ 0.87
CHRND-203ENST00000441621 UBTFP17480 764 aaKnown RBP20.47■□□□□ 0.87
CHRND-203ENST00000441621 ANP32EQ9BTT0 268 aa20.45■□□□□ 0.87
CHRND-203ENST00000441621 WIZO95785 1651 aa20.45■□□□□ 0.86
CHRND-203ENST00000441621 BCL11AQ9H165 835 aa20.45■□□□□ 0.86
CHRND-203ENST00000441621 TSHZ2Q9NRE2 1034 aa20.44■□□□□ 0.86
CHRND-203ENST00000441621 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
CHRND-203ENST00000441621 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.85
CHRND-203ENST00000441621 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
CHRND-203ENST00000441621 TNIKQ9UKE5 1360 aa20.36■□□□□ 0.85
CHRND-203ENST00000441621 SOGA1O94964 1423 aa20.35■□□□□ 0.85
CHRND-203ENST00000441621 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
CHRND-203ENST00000441621 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
CHRND-203ENST00000441621 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
CHRND-203ENST00000441621 BCANQ96GW7 911 aa20.26■□□□□ 0.83
CHRND-203ENST00000441621 RUSC2Q8N2Y8 1516 aa20.24■□□□□ 0.83
CHRND-203ENST00000441621 BAZ1AQ9NRL2 1556 aaPredicted RBP20.19■□□□□ 0.82
CHRND-203ENST00000441621 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
CHRND-203ENST00000441621 APLP2Q06481 763 aa20.13■□□□□ 0.81
CHRND-203ENST00000441621 GOLGA3Q08378 1498 aa20.12■□□□□ 0.81
CHRND-203ENST00000441621 KCNH8Q96L42 1107 aa20.11■□□□□ 0.81
CHRND-203ENST00000441621 FKBP8Q14318 412 aa20.06■□□□□ 0.8
CHRND-203ENST00000441621 EEA1Q15075 1411 aa20.05■□□□□ 0.8
CHRND-203ENST00000441621 CLIP1P30622 1438 aa20.02■□□□□ 0.8
CHRND-203ENST00000441621 DHX57Q6P158 1386 aaKnown RBP20■□□□□ 0.79
CHRND-203ENST00000441621 DNAJC5BQ9UF47 199 aa19.99■□□□□ 0.79
CHRND-203ENST00000441621 RBM19Q9Y4C8 960 aaKnown RBP19.97■□□□□ 0.79
CHRND-203ENST00000441621 VPS8Q8N3P4 1428 aa19.95■□□□□ 0.78
CHRND-203ENST00000441621 TOP2AP11388 1531 aaKnown RBP19.95■□□□□ 0.78
CHRND-203ENST00000441621 ITGAEP38570 1179 aa19.93■□□□□ 0.78
CHRND-203ENST00000441621 SMARCA2P51531 1590 aa19.93■□□□□ 0.78
CHRND-203ENST00000441621 CEP164Q9UPV0 1460 aa19.89■□□□□ 0.77
CHRND-203ENST00000441621 NEFLP07196 543 aa19.86■□□□□ 0.77
CHRND-203ENST00000441621 DDX10Q13206 875 aaKnown RBP19.81■□□□□ 0.76
CHRND-203ENST00000441621 MSH5O43196 834 aa19.79■□□□□ 0.76
CHRND-203ENST00000441621 TRIM52Q96A61 297 aa19.79■□□□□ 0.76
CHRND-203ENST00000441621 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
CHRND-203ENST00000441621 KIF21BO75037 1637 aa19.77■□□□□ 0.76
CHRND-203ENST00000441621 RAPGEF2Q9Y4G8 1499 aa19.77■□□□□ 0.75
CHRND-203ENST00000441621 KANK4Q5T7N3 995 aaPredicted RBP19.76■□□□□ 0.75
CHRND-203ENST00000441621 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
CHRND-203ENST00000441621 ERICH6Q7L0X2 663 aa19.7■□□□□ 0.74
CHRND-203ENST00000441621 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
CHRND-203ENST00000441621 HIRIP3Q9BW71 556 aaPredicted RBP19.68■□□□□ 0.74
CHRND-203ENST00000441621 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
CHRND-203ENST00000441621 ATAD2BQ9ULI0 1458 aa19.63■□□□□ 0.73
CHRND-203ENST00000441621 IRX6P78412 446 aaPredicted RBP19.61■□□□□ 0.73
CHRND-203ENST00000441621 PRKCSHP14314 528 aaPredicted RBP19.61■□□□□ 0.73
CHRND-203ENST00000441621 SIN3AQ96ST3 1273 aa19.57■□□□□ 0.72
CHRND-203ENST00000441621 ANP32CO43423 234 aa19.55■□□□□ 0.72
CHRND-203ENST00000441621 RRBP1Q9P2E9 1410 aaKnown RBP19.55■□□□□ 0.72
CHRND-203ENST00000441621 CCNB3Q8WWL7 1395 aa19.55■□□□□ 0.72
CHRND-203ENST00000441621 RAB3GAP2Q9H2M9 1393 aa19.55■□□□□ 0.72
CHRND-203ENST00000441621 PPP1R15AO75807 674 aaPredicted RBP19.54■□□□□ 0.72
CHRND-203ENST00000441621 CDK11AQ9UQ88 783 aaPredicted RBP19.54■□□□□ 0.72
CHRND-203ENST00000441621 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms