RNA–Protein interactions for RNA: ENST00000439554.1

FRMPD3-202, Transcript of FERM and PDZ domain containing 3, humanhuman

APPRIS ALT2 TSL 5

Gene FRMPD3, Length 7,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMPD3-202ENST00000439554 NISCHQ9Y2I1 1504 aa24.19■■□□□ 1.46
FRMPD3-202ENST00000439554 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
FRMPD3-202ENST00000439554 PELP1Q8IZL8 1130 aaKnown RBP23.15■■□□□ 1.3
FRMPD3-202ENST00000439554 SUPT5HO00267 1087 aaKnown RBP22.87■■□□□ 1.25
FRMPD3-202ENST00000439554 MYT1Q01538 1121 aa22.66■■□□□ 1.22
FRMPD3-202ENST00000439554 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
FRMPD3-202ENST00000439554 APLP2Q06481 763 aa22.16■■□□□ 1.14
FRMPD3-202ENST00000439554 CCER1Q8TC90 406 aaPredicted RBP22■■□□□ 1.11
FRMPD3-202ENST00000439554 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
FRMPD3-202ENST00000439554 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
FRMPD3-202ENST00000439554 CENPBP07199 599 aaPredicted RBP21.91■■□□□ 1.1
FRMPD3-202ENST00000439554 ERICH6Q7L0X2 663 aa21.73■■□□□ 1.07
FRMPD3-202ENST00000439554 TRIM41Q8WV44 630 aa21.56■■□□□ 1.04
FRMPD3-202ENST00000439554 PCGF6Q9BYE7 350 aa21.45■■□□□ 1.02
FRMPD3-202ENST00000439554 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
FRMPD3-202ENST00000439554 NEFLP07196 543 aa21.24■□□□□ 0.99
FRMPD3-202ENST00000439554 YTHDC1Q96MU7 727 aaKnown RBP21.16■□□□□ 0.98
FRMPD3-202ENST00000439554 UBTFP17480 764 aaKnown RBP21.14■□□□□ 0.97
FRMPD3-202ENST00000439554 TRIM26Q12899 539 aaPredicted RBP21.1■□□□□ 0.97
FRMPD3-202ENST00000439554 TTBK1Q5TCY1 1321 aaPredicted RBP20.87■□□□□ 0.93
FRMPD3-202ENST00000439554 HRCP23327 699 aa20.83■□□□□ 0.92
FRMPD3-202ENST00000439554 ATP1B4Q9UN42 357 aaPredicted RBP20.78■□□□□ 0.92
FRMPD3-202ENST00000439554 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.92
FRMPD3-202ENST00000439554 RANGAP1P46060 587 aaPredicted RBP20.72■□□□□ 0.91
FRMPD3-202ENST00000439554 DAXXQ9UER7 740 aaPredicted RBP20.66■□□□□ 0.9
FRMPD3-202ENST00000439554 RTL5Q5HYW3 569 aaPredicted RBP20.41■□□□□ 0.86
FRMPD3-202ENST00000439554 LOC105371045A0A1W2PR82 267 aa20.25■□□□□ 0.83
FRMPD3-202ENST00000439554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.18■□□□□ 0.82
FRMPD3-202ENST00000439554 HNRNPUL2Q1KMD3 747 aaKnown RBP20.18■□□□□ 0.82
FRMPD3-202ENST00000439554 PPARGC1BQ86YN6 1023 aaKnown RBP20.17■□□□□ 0.82
FRMPD3-202ENST00000439554 CCDC180Q9P1Z9 1646 aa20.17■□□□□ 0.82
FRMPD3-202ENST00000439554 ZCCHC6Q5VYS8 1495 aaKnown RBP20.15■□□□□ 0.82
FRMPD3-202ENST00000439554 CLSPNQ9HAW4 1339 aa20.15■□□□□ 0.82
FRMPD3-202ENST00000439554 DIEXFQ68CQ4 756 aaKnown RBP20.13■□□□□ 0.81
FRMPD3-202ENST00000439554 ZNF316A6NFI3 1004 aaPredicted RBP20.12■□□□□ 0.81
FRMPD3-202ENST00000439554 ITGAEP38570 1179 aa20.11■□□□□ 0.81
FRMPD3-202ENST00000439554 ABCC9O60706 1549 aa20.1■□□□□ 0.81
FRMPD3-202ENST00000439554 MYT1LQ9UL68 1186 aa20.07■□□□□ 0.8
FRMPD3-202ENST00000439554 DCAF1Q9Y4B6 1507 aa19.99■□□□□ 0.79
FRMPD3-202ENST00000439554 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
FRMPD3-202ENST00000439554 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
FRMPD3-202ENST00000439554 POLR3GLQ9BT43 218 aa19.89■□□□□ 0.77
FRMPD3-202ENST00000439554 CDK11AQ9UQ88 783 aaPredicted RBP19.87■□□□□ 0.77
FRMPD3-202ENST00000439554 ANP32CO43423 234 aa19.86■□□□□ 0.77
FRMPD3-202ENST00000439554 TRIM52Q96A61 297 aa19.82■□□□□ 0.76
FRMPD3-202ENST00000439554 GLIPR1L2Q4G1C9 344 aa19.79■□□□□ 0.76
FRMPD3-202ENST00000439554 PABPN1Q86U42 306 aaKnown RBP eCLIP19.75■□□□□ 0.75
FRMPD3-202ENST00000439554 ACIN1Q9UKV3 1341 aaKnown RBP19.74■□□□□ 0.75
FRMPD3-202ENST00000439554 EEA1Q15075 1411 aa19.71■□□□□ 0.75
FRMPD3-202ENST00000439554 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
FRMPD3-202ENST00000439554 GTF3C3Q9Y5Q9 886 aa19.68■□□□□ 0.74
FRMPD3-202ENST00000439554 ANP32AP39687 249 aaKnown RBP19.61■□□□□ 0.73
FRMPD3-202ENST00000439554 NEUROD1Q13562 356 aa19.61■□□□□ 0.73
FRMPD3-202ENST00000439554 RB1CC1Q8TDY2 1594 aa19.55■□□□□ 0.72
FRMPD3-202ENST00000439554 SLC4A1APQ9BWU0 796 aaKnown RBP19.54■□□□□ 0.72
FRMPD3-202ENST00000439554 ZBTB47Q9UFB7 747 aaPredicted RBP19.51■□□□□ 0.71
FRMPD3-202ENST00000439554 NACADO15069 1562 aa19.5■□□□□ 0.71
FRMPD3-202ENST00000439554 ANP32BQ92688 251 aaKnown RBP19.48■□□□□ 0.71
FRMPD3-202ENST00000439554 NEFMP07197 916 aa19.47■□□□□ 0.71
FRMPD3-202ENST00000439554 TONSLQ96HA7 1378 aa19.45■□□□□ 0.7
FRMPD3-202ENST00000439554 GOLGA3Q08378 1498 aa19.37■□□□□ 0.69
FRMPD3-202ENST00000439554 ZNF326Q5BKZ1 582 aaKnown RBP19.34■□□□□ 0.69
FRMPD3-202ENST00000439554 CNGB1Q14028 1251 aaPredicted RBP19.33■□□□□ 0.68
FRMPD3-202ENST00000439554 CANXP27824 592 aaKnown RBP19.32■□□□□ 0.68
FRMPD3-202ENST00000439554 CLIP1P30622 1438 aa19.3■□□□□ 0.68
FRMPD3-202ENST00000439554 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
FRMPD3-202ENST00000439554 FBLN2P98095 1184 aa19.26■□□□□ 0.67
FRMPD3-202ENST00000439554 UPF2Q9HAU5 1272 aaKnown RBP19.21■□□□□ 0.67
FRMPD3-202ENST00000439554 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
FRMPD3-202ENST00000439554 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
FRMPD3-202ENST00000439554 BCANQ96GW7 911 aa19.21■□□□□ 0.67
FRMPD3-202ENST00000439554 ANP32EQ9BTT0 268 aa19.19■□□□□ 0.66
FRMPD3-202ENST00000439554 P3H3Q8IVL6 736 aa19.19■□□□□ 0.66
FRMPD3-202ENST00000439554 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.18■□□□□ 0.66
FRMPD3-202ENST00000439554 MTUS2Q5JR59 1369 aa19.18■□□□□ 0.66
FRMPD3-202ENST00000439554 BAZ1AQ9NRL2 1556 aaPredicted RBP19.17■□□□□ 0.66
FRMPD3-202ENST00000439554 EIF5BO60841 1220 aaKnown RBP19.16■□□□□ 0.66
FRMPD3-202ENST00000439554 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
FRMPD3-202ENST00000439554 CEP162Q5TB80 1403 aa19.14■□□□□ 0.65
FRMPD3-202ENST00000439554 ZNF777Q9ULD5 760 aaPredicted RBP19.13■□□□□ 0.65
FRMPD3-202ENST00000439554 KIF27Q86VH2 1401 aa19.11■□□□□ 0.65
FRMPD3-202ENST00000439554 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
FRMPD3-202ENST00000439554 TSPY4P0CV99 314 aa19.08■□□□□ 0.65
FRMPD3-202ENST00000439554 TSPY10P0CW01 314 aa19.08■□□□□ 0.65
FRMPD3-202ENST00000439554 NPM1P06748 294 aaKnown RBP eCLIP19.06■□□□□ 0.64
FRMPD3-202ENST00000439554 HNRNPUQ00839 825 aaKnown RBP eCLIP19.03■□□□□ 0.64
FRMPD3-202ENST00000439554 ESF1Q9H501 851 aaKnown RBP19.02■□□□□ 0.64
FRMPD3-202ENST00000439554 FKBP8Q14318 412 aa19.02■□□□□ 0.63
FRMPD3-202ENST00000439554 DDRGK1Q96HY6 314 aa19.01■□□□□ 0.63
FRMPD3-202ENST00000439554 TIMELESSQ9UNS1 1208 aa19■□□□□ 0.63
FRMPD3-202ENST00000439554 EIF4G2P78344 907 aaKnown RBP eCLIP18.99■□□□□ 0.63
FRMPD3-202ENST00000439554 MYO15BQ96JP2 1530 aa18.98■□□□□ 0.63
FRMPD3-202ENST00000439554 TNNT2P45379 298 aaPredicted RBP18.97■□□□□ 0.63
FRMPD3-202ENST00000439554 TMC1Q8TDI8 760 aa18.97■□□□□ 0.63
FRMPD3-202ENST00000439554 HSP90AA1P07900 732 aaKnown RBP18.97■□□□□ 0.63
FRMPD3-202ENST00000439554 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
FRMPD3-202ENST00000439554 DDX10Q13206 875 aaKnown RBP18.96■□□□□ 0.63
FRMPD3-202ENST00000439554 WDR43Q15061 677 aaKnown RBP eCLIP18.94■□□□□ 0.62
FRMPD3-202ENST00000439554 CDCA8Q53HL2 280 aa18.94■□□□□ 0.62
FRMPD3-202ENST00000439554 CCDC136Q96JN2 1154 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms