RNA–Protein interactions for RNA: ENST00000434140.5

ALS2CL-206, Transcript of ALS2 C-terminal like, humanhuman

TSL 1 (best)

Gene ALS2CL, Length 3,937 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CL-206ENST00000434140 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
ALS2CL-206ENST00000434140 SUPT5HO00267 1087 aaKnown RBP18.88■□□□□ 0.61
ALS2CL-206ENST00000434140 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
ALS2CL-206ENST00000434140 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.6
ALS2CL-206ENST00000434140 PCGF6Q9BYE7 350 aa18.65■□□□□ 0.58
ALS2CL-206ENST00000434140 HRCP23327 699 aa18.59■□□□□ 0.57
ALS2CL-206ENST00000434140 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.56
ALS2CL-206ENST00000434140 PELP1Q8IZL8 1130 aaKnown RBP18.02■□□□□ 0.48
ALS2CL-206ENST00000434140 CHIC1Q5VXU3 224 aa18.02■□□□□ 0.48
ALS2CL-206ENST00000434140 LOC105371045A0A1W2PR82 267 aa17.93■□□□□ 0.46
ALS2CL-206ENST00000434140 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
ALS2CL-206ENST00000434140 MYO15BQ96JP2 1530 aa17.76■□□□□ 0.43
ALS2CL-206ENST00000434140 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
ALS2CL-206ENST00000434140 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
ALS2CL-206ENST00000434140 FAM9AQ8IZU1 332 aaPredicted RBP17.63■□□□□ 0.41
ALS2CL-206ENST00000434140 ZEB1P37275 1124 aaPredicted RBP17.6■□□□□ 0.41
ALS2CL-206ENST00000434140 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
ALS2CL-206ENST00000434140 CENPBP07199 599 aaPredicted RBP17.34■□□□□ 0.37
ALS2CL-206ENST00000434140 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
ALS2CL-206ENST00000434140 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
ALS2CL-206ENST00000434140 MYT1Q01538 1121 aa17.31■□□□□ 0.36
ALS2CL-206ENST00000434140 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
ALS2CL-206ENST00000434140 DCAF1Q9Y4B6 1507 aa17.28■□□□□ 0.36
ALS2CL-206ENST00000434140 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
ALS2CL-206ENST00000434140 NEUROD1Q13562 356 aa17.27■□□□□ 0.36
ALS2CL-206ENST00000434140 ACIN1Q9UKV3 1341 aaKnown RBP17.27■□□□□ 0.36
ALS2CL-206ENST00000434140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.35
ALS2CL-206ENST00000434140 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
ALS2CL-206ENST00000434140 ABCC9O60706 1549 aa17.08■□□□□ 0.32
ALS2CL-206ENST00000434140 ZCCHC6Q5VYS8 1495 aaKnown RBP16.98■□□□□ 0.31
ALS2CL-206ENST00000434140 CCDC180Q9P1Z9 1646 aa16.93■□□□□ 0.3
ALS2CL-206ENST00000434140 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
ALS2CL-206ENST00000434140 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
ALS2CL-206ENST00000434140 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
ALS2CL-206ENST00000434140 MIER1Q8N108 512 aa16.64■□□□□ 0.25
ALS2CL-206ENST00000434140 UBTFP17480 764 aaKnown RBP16.6■□□□□ 0.25
ALS2CL-206ENST00000434140 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
ALS2CL-206ENST00000434140 RANGAP1P46060 587 aaPredicted RBP16.59■□□□□ 0.25
ALS2CL-206ENST00000434140 BCANQ96GW7 911 aa16.49■□□□□ 0.23
ALS2CL-206ENST00000434140 APLP2Q06481 763 aa16.46■□□□□ 0.22
ALS2CL-206ENST00000434140 BCL11AQ9H165 835 aa16.31■□□□□ 0.2
ALS2CL-206ENST00000434140 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
ALS2CL-206ENST00000434140 ANP32EQ9BTT0 268 aa16.29■□□□□ 0.2
ALS2CL-206ENST00000434140 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
ALS2CL-206ENST00000434140 ERICH6Q7L0X2 663 aa16.23■□□□□ 0.19
ALS2CL-206ENST00000434140 NEFLP07196 543 aa16.22■□□□□ 0.19
ALS2CL-206ENST00000434140 ITGAEP38570 1179 aa16.2■□□□□ 0.18
ALS2CL-206ENST00000434140 TSHZ2Q9NRE2 1034 aa16.19■□□□□ 0.18
ALS2CL-206ENST00000434140 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
ALS2CL-206ENST00000434140 CECR2Q9BXF3 1484 aa16.17■□□□□ 0.18
ALS2CL-206ENST00000434140 FKBP8Q14318 412 aa16.17■□□□□ 0.18
ALS2CL-206ENST00000434140 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
ALS2CL-206ENST00000434140 CEP162Q5TB80 1403 aa16.08■□□□□ 0.16
ALS2CL-206ENST00000434140 NACADO15069 1562 aa16.04■□□□□ 0.16
ALS2CL-206ENST00000434140 CLSPNQ9HAW4 1339 aa16.02■□□□□ 0.16
ALS2CL-206ENST00000434140 KCNH8Q96L42 1107 aa16■□□□□ 0.15
ALS2CL-206ENST00000434140 TRIM52Q96A61 297 aa15.98■□□□□ 0.15
ALS2CL-206ENST00000434140 DDX10Q13206 875 aaKnown RBP15.96■□□□□ 0.15
ALS2CL-206ENST00000434140 MROH2BQ7Z745 1585 aa15.93■□□□□ 0.14
ALS2CL-206ENST00000434140 RBM19Q9Y4C8 960 aaKnown RBP15.93■□□□□ 0.14
ALS2CL-206ENST00000434140 ATP1B4Q9UN42 357 aaPredicted RBP15.91■□□□□ 0.14
ALS2CL-206ENST00000434140 HIRIP3Q9BW71 556 aaPredicted RBP15.91■□□□□ 0.14
ALS2CL-206ENST00000434140 SOGA1O94964 1423 aa15.89■□□□□ 0.13
ALS2CL-206ENST00000434140 IRX6P78412 446 aaPredicted RBP15.88■□□□□ 0.13
ALS2CL-206ENST00000434140 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
ALS2CL-206ENST00000434140 CDK11AQ9UQ88 783 aaPredicted RBP15.83■□□□□ 0.12
ALS2CL-206ENST00000434140 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
ALS2CL-206ENST00000434140 WRNQ14191 1432 aaPredicted RBP eCLIP15.79■□□□□ 0.12
ALS2CL-206ENST00000434140 ANP32CO43423 234 aa15.78■□□□□ 0.12
ALS2CL-206ENST00000434140 ABCC8Q09428 1581 aa15.78■□□□□ 0.12
ALS2CL-206ENST00000434140 WIZO95785 1651 aa15.75■□□□□ 0.11
ALS2CL-206ENST00000434140 CNGB1Q14028 1251 aaPredicted RBP15.75■□□□□ 0.11
ALS2CL-206ENST00000434140 CLIP1P30622 1438 aa15.74■□□□□ 0.11
ALS2CL-206ENST00000434140 NBR1Q14596 966 aa15.74■□□□□ 0.11
ALS2CL-206ENST00000434140 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
ALS2CL-206ENST00000434140 BAZ1AQ9NRL2 1556 aaPredicted RBP15.69■□□□□ 0.1
ALS2CL-206ENST00000434140 HNRNPUQ00839 825 aaKnown RBP eCLIP15.69■□□□□ 0.1
ALS2CL-206ENST00000434140 FAM50AQ14320 339 aaKnown RBP15.69■□□□□ 0.1
ALS2CL-206ENST00000434140 GOLGA3Q08378 1498 aa15.67■□□□□ 0.1
ALS2CL-206ENST00000434140 SIN3AQ96ST3 1273 aa15.65■□□□□ 0.1
ALS2CL-206ENST00000434140 DHX57Q6P158 1386 aaKnown RBP15.62■□□□□ 0.09
ALS2CL-206ENST00000434140 KANK4Q5T7N3 995 aaPredicted RBP15.62■□□□□ 0.09
ALS2CL-206ENST00000434140 DEKP35659 375 aaKnown RBP15.6■□□□□ 0.09
ALS2CL-206ENST00000434140 MSH5O43196 834 aa15.6■□□□□ 0.09
ALS2CL-206ENST00000434140 RTL5Q5HYW3 569 aaPredicted RBP15.59■□□□□ 0.09
ALS2CL-206ENST00000434140 P3H3Q8IVL6 736 aa15.56■□□□□ 0.08
ALS2CL-206ENST00000434140 EEA1Q15075 1411 aa15.54■□□□□ 0.08
ALS2CL-206ENST00000434140 BAZ1BQ9UIG0 1483 aaKnown RBP15.54■□□□□ 0.08
ALS2CL-206ENST00000434140 VPS8Q8N3P4 1428 aa15.52■□□□□ 0.08
ALS2CL-206ENST00000434140 RTN4Q9NQC3 1192 aaKnown RBP15.52■□□□□ 0.08
ALS2CL-206ENST00000434140 B4GALNT3Q6L9W6 998 aa15.51■□□□□ 0.07
ALS2CL-206ENST00000434140 FAM9BQ8IZU0 186 aa15.5■□□□□ 0.07
ALS2CL-206ENST00000434140 SENP3-EIF4A1A0A087X0R7 540 aa15.49■□□□□ 0.07
ALS2CL-206ENST00000434140 POLR3GLQ9BT43 218 aa15.49■□□□□ 0.07
ALS2CL-206ENST00000434140 PRKCSHP14314 528 aaPredicted RBP15.47■□□□□ 0.07
ALS2CL-206ENST00000434140 CEP164Q9UPV0 1460 aa15.47■□□□□ 0.07
ALS2CL-206ENST00000434140 NPM2Q86SE8 214 aaKnown RBP15.46■□□□□ 0.06
ALS2CL-206ENST00000434140 SMARCA4P51532 1647 aa15.43■□□□□ 0.06
ALS2CL-206ENST00000434140 MYT1LQ9UL68 1186 aa15.42■□□□□ 0.06
ALS2CL-206ENST00000434140 ANP32AP39687 249 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms